Index of /kundaje/marinovg/oak/ENCODE4/datasets-Hi-C/L1027-Tetrahymena_thermophila_Hi-C_MluCl/juicer-L1027-Tetrahymena_thermophila_Hi-C_MluCl-all-reads-3D_DNA
Name
Last modified
Size
Description
Parent Directory
-
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.asm
2019-09-24 05:01
5.1K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.assembly
2019-09-24 05:02
27K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.cprops
2019-09-24 04:39
21K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.hic
2019-09-24 05:29
274M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0_asm.scaffold_track.txt
2019-09-24 05:02
131K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0_asm.superscaf_track.txt
2019-09-24 05:02
19K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.asm
2019-09-24 06:20
5.1K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.assembly
2019-09-24 06:21
29K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.cprops
2019-09-24 05:33
22K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.hic
2019-09-24 06:47
274M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1_asm.scaffold_track.txt
2019-09-24 06:21
133K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1_asm.superscaf_track.txt
2019-09-24 06:21
24K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.asm
2019-09-24 07:28
5.2K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.assembly
2019-09-24 07:29
30K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.cprops
2019-09-24 06:50
24K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.hic
2019-09-24 07:55
274M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2_asm.scaffold_track.txt
2019-09-24 07:29
138K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2_asm.superscaf_track.txt
2019-09-24 07:29
33K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL.assembly
2019-09-24 09:29
34K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL.fasta
2019-09-24 09:29
100M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL.hic
2019-09-24 09:58
273M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL_asm.scaffold_track.txt
2019-09-24 09:31
137K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL_asm.superscaf_track.txt
2019-09-24 09:31
31K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.cprops
2019-09-24 04:39
21K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.edits.txt
2019-09-24 06:50
7.4K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.asm
2019-09-24 09:00
5.1K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.assembly
2019-09-24 09:02
30K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.cprops
2019-09-24 09:00
23K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.fasta
2019-09-24 09:28
99M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.hic
2019-09-24 09:28
273M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.asm
2019-09-24 08:00
5.2K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.cprops
2019-09-24 07:59
24K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.depletion_score_narrow.wig
2019-09-24 07:59
1.4M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.depletion_score_wide.wig
2019-09-24 07:55
16K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.edits_2D.txt
2019-09-24 07:59
261
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.hic
2019-09-24 08:28
274M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.mismatch_narrow.bed
2019-09-24 07:59
52
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.mismatch_wide.bed
2019-09-24 07:55
52
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.mismatches_2D.txt
2019-09-24 07:59
245
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.assembly
2019-09-24 08:34
30K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.depletion_score_narrow.wig
2019-09-24 08:33
1.4M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.depletion_score_wide.wig
2019-09-24 08:28
16K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.edits_2D.txt
2019-09-24 08:33
154
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.mismatch_narrow.bed
2019-09-24 08:33
27
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.mismatch_wide.bed
2019-09-24 08:28
27
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.mismatches_2D.txt
2019-09-24 08:33
47
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.suspicious_2D.txt
2019-09-24 08:33
154
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.suspect_2D.txt
2019-09-24 07:59
459
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished_asm.scaffold_track.txt
2019-09-24 08:02
139K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished_asm.superscaf_track.txt
2019-09-24 08:02
33K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.asm
2019-09-24 09:00
5.1K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.assembly
2019-09-24 09:02
30K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.cprops
2019-09-24 09:00
23K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.fasta
2019-09-24 09:28
99M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.hic
2019-09-24 09:28
273M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.review.assembly
2019-09-24 10:21
30K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom_asm.scaffold_track.txt
2019-09-24 09:02
137K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom_asm.superscaf_track.txt
2019-09-24 09:02
31K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.asm
2019-09-24 07:28
5.2K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.cprops
2019-09-24 06:50
24K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.hic
2019-09-24 07:55
274M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.polish.assembly
2019-09-24 08:02
30K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved_asm.scaffold_track.txt
2019-09-24 07:29
138K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved_asm.superscaf_track.txt
2019-09-24 07:29
33K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.asm
2019-09-24 08:33
5.2K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.assembly
2019-09-24 09:00
30K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.cprops
2019-09-24 08:33
24K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.hic
2019-09-24 09:00
274M
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split_asm.scaffold_track.txt
2019-09-24 08:34
139K
Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split_asm.superscaf_track.txt
2019-09-24 08:34
33K
archive.Tetrahymena_thermophila.JCVI-TTA1-2.2.20.edits.at.step.1.txt
2019-09-24 06:50
3.4K
coverage_wide.at.step.0.wig
2019-09-24 05:33
76K
coverage_wide.at.step.1.wig
2019-09-24 06:50
76K
depletion_score_narrow.at.step.0.wig
2019-09-24 05:33
1.3M
depletion_score_narrow.at.step.1.wig
2019-09-24 06:50
1.3M
depletion_score_wide.at.step.0.wig
2019-09-24 05:30
64K
depletion_score_wide.at.step.1.wig
2019-09-24 06:47
68K
edits.for.step.1.txt
2019-09-24 05:33
5.7K
edits.for.step.2.txt
2019-09-24 06:50
7.3K
final-post-review/
2019-11-28 09:00
-
h.edits.txt
2019-09-24 08:33
122
mismatch_narrow.at.step.0.bed
2019-09-24 05:33
675
mismatch_narrow.at.step.1.bed
2019-09-24 06:50
779
mismatch_wide.at.step.0.bed
2019-09-24 05:30
594
mismatch_wide.at.step.1.bed
2019-09-24 06:47
671
mismatches.at.step.0.txt
2019-09-24 05:33
3.5K
mismatches.at.step.1.txt
2019-09-24 06:50
3.9K
repeats_wide.at.step.0.bed
2019-09-24 05:33
54
repeats_wide.at.step.1.bed
2019-09-24 06:50
29
run-asm-pipeline-post-review.sh
2019-09-24 04:39
11K
run-asm-pipeline.sh
2019-09-24 04:39
44K
suspect.at.step.0.bed
2019-09-24 05:33
729
suspect.at.step.1.bed
2019-09-24 06:50
808
suspect_2D.at.step.0.txt
2019-09-24 05:33
9.1K
suspect_2D.at.step.1.txt
2019-09-24 06:50
11K
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443