## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1930-H4S47C_5M_5min.2x36mers.sacCer3.unique.nochrM.bam] OUTPUT=L1930-H4S47C_5M_5min.2x36mers.sacCer3.unique.nochrM.dedup.bam METRICS_FILE=L1930-H4S47C_5M_5min.2x36mers.sacCer3.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 09 10:26:58 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1620844	0	0	130551	28692	0.080545	11906838

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.016823
2.0	1.904236
3.0	2.67871
4.0	3.354617
5.0	3.944503
6.0	4.459315
7.0	4.908608
8.0	5.30072
9.0	5.642929
10.0	5.941585
11.0	6.202232
12.0	6.429707
13.0	6.628231
14.0	6.80149
15.0	6.952698
16.0	7.084662
17.0	7.199832
18.0	7.300344
19.0	7.388064
20.0	7.464619
21.0	7.531432
22.0	7.589742
23.0	7.640631
24.0	7.685043
25.0	7.723803
26.0	7.75763
27.0	7.787152
28.0	7.812916
29.0	7.835402
30.0	7.855026
31.0	7.872152
32.0	7.887099
33.0	7.900144
34.0	7.911528
35.0	7.921463
36.0	7.930135
37.0	7.937702
38.0	7.944306
39.0	7.95007
40.0	7.955101
41.0	7.959491
42.0	7.963322
43.0	7.966666
44.0	7.969584
45.0	7.972131
46.0	7.974353
47.0	7.976293
48.0	7.977986
49.0	7.979464
50.0	7.980753
51.0	7.981878
52.0	7.982861
53.0	7.983718
54.0	7.984466
55.0	7.985119
56.0	7.985688
57.0	7.986186
58.0	7.98662
59.0	7.986998
60.0	7.987329
61.0	7.987617
62.0	7.987869
63.0	7.988089
64.0	7.98828
65.0	7.988448
66.0	7.988594
67.0	7.988721
68.0	7.988833
69.0	7.98893
70.0	7.989014
71.0	7.989088
72.0	7.989153
73.0	7.989209
74.0	7.989258
75.0	7.989301
76.0	7.989339
77.0	7.989371
78.0	7.9894
79.0	7.989425
80.0	7.989446
81.0	7.989465
82.0	7.989482
83.0	7.989496
84.0	7.989509
85.0	7.98952
86.0	7.98953
87.0	7.989538
88.0	7.989545
89.0	7.989552
90.0	7.989557
91.0	7.989562
92.0	7.989566
93.0	7.98957
94.0	7.989573
95.0	7.989576
96.0	7.989578
97.0	7.989581
98.0	7.989582
99.0	7.989584
100.0	7.989586