## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1908-GM18278_FS_test_400K.2x25mers.hg38-female.unique.nochrM.bam] OUTPUT=L1908-GM18278_FS_test_400K.2x25mers.hg38-female.unique.nochrM.dedup.bam METRICS_FILE=L1908-GM18278_FS_test_400K.2x25mers.hg38-female.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Nov 06 12:33:43 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	9970996	0	0	327172	81589	0.032812	195808475

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.008042
2.0	1.966037
3.0	2.87647
4.0	3.741703
5.0	4.563979
6.0	5.345431
7.0	6.088087
8.0	6.793871
9.0	7.464615
10.0	8.102058
11.0	8.707854
12.0	9.283574
13.0	9.83071
14.0	10.350683
15.0	10.844841
16.0	11.314465
17.0	11.760773
18.0	12.184923
19.0	12.588016
20.0	12.971095
21.0	13.335156
22.0	13.681143
23.0	14.009952
24.0	14.322436
25.0	14.619406
26.0	14.901633
27.0	15.169848
28.0	15.424746
29.0	15.66699
30.0	15.897207
31.0	16.115994
32.0	16.323919
33.0	16.521521
34.0	16.709313
35.0	16.887781
36.0	17.057389
37.0	17.218576
38.0	17.37176
39.0	17.51734
40.0	17.655692
41.0	17.787175
42.0	17.91213
43.0	18.030881
44.0	18.143737
45.0	18.25099
46.0	18.352918
47.0	18.449785
48.0	18.541844
49.0	18.629332
50.0	18.712476
51.0	18.791492
52.0	18.866586
53.0	18.937951
54.0	19.005773
55.0	19.070228
56.0	19.131483
57.0	19.189697
58.0	19.24502
59.0	19.297597
60.0	19.347564
61.0	19.39505
62.0	19.440178
63.0	19.483066
64.0	19.523825
65.0	19.56256
66.0	19.599372
67.0	19.634356
68.0	19.667604
69.0	19.699201
70.0	19.729229
71.0	19.757766
72.0	19.784886
73.0	19.810661
74.0	19.835155
75.0	19.858433
76.0	19.880556
77.0	19.90158
78.0	19.921561
79.0	19.940549
80.0	19.958595
81.0	19.975745
82.0	19.992043
83.0	20.007532
84.0	20.022253
85.0	20.036242
86.0	20.049537
87.0	20.062172
88.0	20.074179
89.0	20.085591
90.0	20.096436
91.0	20.106742
92.0	20.116537
93.0	20.125845
94.0	20.134692
95.0	20.143099
96.0	20.151088
97.0	20.158681
98.0	20.165898
99.0	20.172755
100.0	20.179273