## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1905-K562_FS_test_400K.2x20mers.hg38-female.unique.nochrM.bam] OUTPUT=L1905-K562_FS_test_400K.2x20mers.hg38-female.unique.nochrM.dedup.bam METRICS_FILE=L1905-K562_FS_test_400K.2x20mers.hg38-female.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Nov 06 12:33:43 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	8086260	0	0	398488	66459	0.04928	94162673

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.007936
2.0	1.932928
3.0	2.781801
4.0	3.560818
5.0	4.27573
6.0	4.93181
7.0	5.5339
8.0	6.086444
9.0	6.593517
10.0	7.058863
11.0	7.485915
12.0	7.877825
13.0	8.237483
14.0	8.567545
15.0	8.870445
16.0	9.14842
17.0	9.403519
18.0	9.637626
19.0	9.852468
20.0	10.04963
21.0	10.230568
22.0	10.396615
23.0	10.548999
24.0	10.688843
25.0	10.817178
26.0	10.934953
27.0	11.043036
28.0	11.142225
29.0	11.233251
30.0	11.316787
31.0	11.393448
32.0	11.463801
33.0	11.528364
34.0	11.587614
35.0	11.641989
36.0	11.691889
37.0	11.737682
38.0	11.779708
39.0	11.818275
40.0	11.853668
41.0	11.886148
42.0	11.915956
43.0	11.943311
44.0	11.968415
45.0	11.991452
46.0	12.012595
47.0	12.031997
48.0	12.049802
49.0	12.066143
50.0	12.081139
51.0	12.0949
52.0	12.107529
53.0	12.119119
54.0	12.129756
55.0	12.139516
56.0	12.148474
57.0	12.156695
58.0	12.164239
59.0	12.171162
60.0	12.177516
61.0	12.183346
62.0	12.188697
63.0	12.193608
64.0	12.198114
65.0	12.20225
66.0	12.206045
67.0	12.209528
68.0	12.212724
69.0	12.215658
70.0	12.218349
71.0	12.22082
72.0	12.223087
73.0	12.225168
74.0	12.227077
75.0	12.228829
76.0	12.230437
77.0	12.231913
78.0	12.233267
79.0	12.23451
80.0	12.23565
81.0	12.236697
82.0	12.237658
83.0	12.238539
84.0	12.239348
85.0	12.24009
86.0	12.240772
87.0	12.241397
88.0	12.241971
89.0	12.242497
90.0	12.242981
91.0	12.243424
92.0	12.243831
93.0	12.244205
94.0	12.244547
95.0	12.244862
96.0	12.245151
97.0	12.245415
98.0	12.245659
99.0	12.245882
100.0	12.246086