## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1904-K562_FS_test_1M.2x25mers.hg38-female.unique.nochrM.bam] OUTPUT=L1904-K562_FS_test_1M.2x25mers.hg38-female.unique.nochrM.dedup.bam METRICS_FILE=L1904-K562_FS_test_1M.2x25mers.hg38-female.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Nov 06 12:33:43 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	18924695	0	0	1037553	158520	0.054825	194010840

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.008042
2.0	1.922398
3.0	2.751776
4.0	3.504073
5.0	4.186454
6.0	4.805415
7.0	5.366851
8.0	5.876108
9.0	6.338036
10.0	6.757033
11.0	7.137089
12.0	7.481824
13.0	7.79452
14.0	8.078154
15.0	8.335428
16.0	8.568792
17.0	8.780467
18.0	8.972469
19.0	9.146628
20.0	9.3046
21.0	9.44789
22.0	9.577864
23.0	9.695758
24.0	9.802695
25.0	9.899693
26.0	9.987677
27.0	10.067484
28.0	10.139873
29.0	10.205535
30.0	10.265095
31.0	10.319119
32.0	10.368122
33.0	10.412571
34.0	10.452889
35.0	10.48946
36.0	10.522632
37.0	10.552721
38.0	10.580013
39.0	10.604769
40.0	10.627225
41.0	10.647593
42.0	10.666068
43.0	10.682827
44.0	10.698028
45.0	10.711816
46.0	10.724322
47.0	10.735667
48.0	10.745957
49.0	10.75529
50.0	10.763757
51.0	10.771436
52.0	10.778402
53.0	10.78472
54.0	10.790451
55.0	10.795649
56.0	10.800365
57.0	10.804642
58.0	10.808521
59.0	10.812041
60.0	10.815232
61.0	10.818128
62.0	10.820754
63.0	10.823136
64.0	10.825297
65.0	10.827257
66.0	10.829035
67.0	10.830647
68.0	10.83211
69.0	10.833437
70.0	10.83464
71.0	10.835732
72.0	10.836722
73.0	10.83762
74.0	10.838435
75.0	10.839174
76.0	10.839844
77.0	10.840452
78.0	10.841003
79.0	10.841504
80.0	10.841957
81.0	10.842369
82.0	10.842742
83.0	10.843081
84.0	10.843388
85.0	10.843667
86.0	10.843919
87.0	10.844148
88.0	10.844356
89.0	10.844545
90.0	10.844716
91.0	10.844871
92.0	10.845012
93.0	10.84514
94.0	10.845255
95.0	10.84536
96.0	10.845456
97.0	10.845542
98.0	10.845621
99.0	10.845692
100.0	10.845756