## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1904-K562_FS_test_1M.2x20mers.hg38-female.unique.nochrM.bam] OUTPUT=L1904-K562_FS_test_1M.2x20mers.hg38-female.unique.nochrM.dedup.bam METRICS_FILE=L1904-K562_FS_test_1M.2x20mers.hg38-female.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Nov 06 12:33:43 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	18511688	0	0	1010237	154683	0.054573	190768755

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.008024
2.0	1.922828
3.0	2.753034
4.0	3.506463
5.0	4.190217
6.0	4.810739
7.0	5.373876
8.0	5.884936
9.0	6.348734
10.0	6.769641
11.0	7.151623
12.0	7.498281
13.0	7.81288
14.0	8.098386
15.0	8.357488
16.0	8.59263
17.0	8.806026
18.0	8.999688
19.0	9.17544
20.0	9.334939
21.0	9.479688
22.0	9.611051
23.0	9.730266
24.0	9.838456
25.0	9.936641
26.0	10.025746
27.0	10.10661
28.0	10.179997
29.0	10.246597
30.0	10.307038
31.0	10.361889
32.0	10.411668
33.0	10.456843
34.0	10.497841
35.0	10.535047
36.0	10.568813
37.0	10.599456
38.0	10.627265
39.0	10.652503
40.0	10.675406
41.0	10.696192
42.0	10.715055
43.0	10.732174
44.0	10.74771
45.0	10.761809
46.0	10.774604
47.0	10.786216
48.0	10.796754
49.0	10.806317
50.0	10.814996
51.0	10.822873
52.0	10.830021
53.0	10.836508
54.0	10.842395
55.0	10.847738
56.0	10.852586
57.0	10.856987
58.0	10.86098
59.0	10.864604
60.0	10.867893
61.0	10.870878
62.0	10.873586
63.0	10.876045
64.0	10.878275
65.0	10.8803
66.0	10.882137
67.0	10.883805
68.0	10.885318
69.0	10.886691
70.0	10.887938
71.0	10.889069
72.0	10.890095
73.0	10.891027
74.0	10.891872
75.0	10.892639
76.0	10.893335
77.0	10.893967
78.0	10.894541
79.0	10.895061
80.0	10.895533
81.0	10.895962
82.0	10.896351
83.0	10.896704
84.0	10.897024
85.0	10.897315
86.0	10.897579
87.0	10.897818
88.0	10.898036
89.0	10.898233
90.0	10.898412
91.0	10.898574
92.0	10.898722
93.0	10.898855
94.0	10.898977
95.0	10.899087
96.0	10.899187
97.0	10.899278
98.0	10.89936
99.0	10.899435
100.0	10.899502