## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L2728-K562_456_SMAD1.2x36mers.hg38-male.unique.bam] OUTPUT=L2728-K562_456_SMAD1.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L2728-K562_456_SMAD1.2x36mers.hg38-male.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Mar 06 11:36:21 PST 2023

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	5968635	0	0	537109	132110	0.089989	40086807

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.020993
2.0	1.900743
3.0	2.658789
4.0	3.311969
5.0	3.874789
6.0	4.359749
7.0	4.777621
8.0	5.137685
9.0	5.447938
10.0	5.715271
11.0	5.945622
12.0	6.144106
13.0	6.315132
14.0	6.462499
15.0	6.589479
16.0	6.698893
17.0	6.793171
18.0	6.874407
19.0	6.944405
20.0	7.004719
21.0	7.056689
22.0	7.10147
23.0	7.140056
24.0	7.173304
25.0	7.201953
26.0	7.226638
27.0	7.247909
28.0	7.266237
29.0	7.282029
30.0	7.295637
31.0	7.307362
32.0	7.317465
33.0	7.326171
34.0	7.333672
35.0	7.340136
36.0	7.345705
37.0	7.350504
38.0	7.354639
39.0	7.358202
40.0	7.361272
41.0	7.363918
42.0	7.366197
43.0	7.368161
44.0	7.369854
45.0	7.371312
46.0	7.372568
47.0	7.373651
48.0	7.374584
49.0	7.375388
50.0	7.376081
51.0	7.376677
52.0	7.377192
53.0	7.377635
54.0	7.378017
55.0	7.378346
56.0	7.378629
57.0	7.378873
58.0	7.379084
59.0	7.379265
60.0	7.379422
61.0	7.379556
62.0	7.379672
63.0	7.379772
64.0	7.379858
65.0	7.379933
66.0	7.379997
67.0	7.380052
68.0	7.380099
69.0	7.38014
70.0	7.380175
71.0	7.380206
72.0	7.380232
73.0	7.380254
74.0	7.380274
75.0	7.380291
76.0	7.380305
77.0	7.380317
78.0	7.380328
79.0	7.380337
80.0	7.380345
81.0	7.380352
82.0	7.380358
83.0	7.380363
84.0	7.380368
85.0	7.380371
86.0	7.380375
87.0	7.380377
88.0	7.38038
89.0	7.380382
90.0	7.380384
91.0	7.380385
92.0	7.380387
93.0	7.380388
94.0	7.380389
95.0	7.38039
96.0	7.38039
97.0	7.380391
98.0	7.380392
99.0	7.380392
100.0	7.380392