## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L318-1x_cells_no_zymo.2x36mers.unique.bam] OUTPUT=L318-1x_cells_no_zymo.2x36mers.unique.dedup.bam METRICS_FILE=L318-1x_cells_no_zymo.2x36mers.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sun Sep 02 11:01:09 PDT 2018

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	480665	1866834	0	5503	3238	0.011449	50157848

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.00675
2.0	2.003898
3.0	2.991536
4.0	3.969754
5.0	4.938644
6.0	5.898292
7.0	6.848788
8.0	7.790219
9.0	8.722671
10.0	9.646231
11.0	10.560982
12.0	11.467008
13.0	12.364394
14.0	13.253221
15.0	14.133571
16.0	15.005525
17.0	15.869163
18.0	16.724564
19.0	17.571807
20.0	18.41097
21.0	19.242129
22.0	20.065361
23.0	20.880742
24.0	21.688347
25.0	22.488249
26.0	23.280522
27.0	24.065239
28.0	24.842472
29.0	25.612292
30.0	26.37477
31.0	27.129977
32.0	27.87798
33.0	28.61885
34.0	29.352654
35.0	30.079459
36.0	30.799333
37.0	31.512341
38.0	32.218549
39.0	32.918021
40.0	33.610823
41.0	34.297017
42.0	34.976667
43.0	35.649834
44.0	36.316582
45.0	36.97697
46.0	37.63106
47.0	38.278912
48.0	38.920585
49.0	39.556139
50.0	40.185631
51.0	40.809119
52.0	41.426661
53.0	42.038313
54.0	42.644132
55.0	43.244173
56.0	43.838491
57.0	44.427141
58.0	45.010177
59.0	45.587652
60.0	46.15962
61.0	46.726133
62.0	47.287242
63.0	47.843001
64.0	48.393459
65.0	48.938667
66.0	49.478675
67.0	50.013533
68.0	50.54329
69.0	51.067994
70.0	51.587694
71.0	52.102438
72.0	52.612272
73.0	53.117244
74.0	53.6174
75.0	54.112786
76.0	54.603447
77.0	55.089429
78.0	55.570776
79.0	56.047532
80.0	56.519741
81.0	56.987446
82.0	57.450691
83.0	57.909517
84.0	58.363968
85.0	58.814085
86.0	59.259908
87.0	59.70148
88.0	60.13884
89.0	60.572029
90.0	61.001087
91.0	61.426052
92.0	61.846965
93.0	62.263863
94.0	62.676785
95.0	63.085769
96.0	63.490853
97.0	63.892073
98.0	64.289466
99.0	64.683069
100.0	65.072919