python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq0 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq0 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks0
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq1 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq1 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks1
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq10 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq10 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks10
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq100 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq100 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks100
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq101 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq101 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks101
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq102 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq102 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks102
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq103 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq103 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks103
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq104 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq104 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks104
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq105 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq105 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks105
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq106 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq106 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks106
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq107 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq107 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks107
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq108 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq108 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks108
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq109 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq109 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks109
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq11 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq11 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks11
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq110 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq110 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks110
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq111 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq111 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks111
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq112 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq112 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks112
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq113 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq113 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks113
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq114 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq114 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks114
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq115 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq115 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks115
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq116 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq116 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks116
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq12 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq12 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks12
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq13 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq13 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks13
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq14 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq14 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks14
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq15 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq15 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks15
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq16 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq16 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks16
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq17 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq17 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks17
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq18 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq18 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks18
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq19 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq19 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks19
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq2 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq2 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks2
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq20 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq20 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks20
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq21 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq21 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks21
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq22 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq22 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks22
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq23 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq23 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks23
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq24 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq24 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks24
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq25 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq25 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks25
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq26 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq26 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks26
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq27 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq27 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks27
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq28 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq28 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks28
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq29 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq29 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks29
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq3 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq3 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks3
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq30 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq30 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks30
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq31 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq31 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks31
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq32 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq32 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks32
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq33 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq33 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks33
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq34 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq34 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks34
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq35 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq35 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks35
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq36 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq36 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks36
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq37 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq37 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks37
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq38 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq38 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks38
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq39 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq39 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks39
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq4 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq4 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks4
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq40 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq40 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks40
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq41 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq41 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks41
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq42 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq42 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks42
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq43 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq43 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks43
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq44 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq44 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks44
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq45 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq45 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks45
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq46 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq46 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks46
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq47 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq47 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks47
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq48 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq48 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks48
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq49 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq49 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks49
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq5 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq5 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks5
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq50 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq50 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks50
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq51 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq51 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks51
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq52 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq52 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks52
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq53 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq53 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks53
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq54 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq54 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks54
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq55 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq55 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks55
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq56 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq56 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks56
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq57 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq57 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks57
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq58 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq58 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks58
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq59 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq59 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks59
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq6 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq6 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks6
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq60 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq60 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks60
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq61 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq61 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks61
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq62 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq62 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks62
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq63 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq63 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks63
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq64 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq64 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks64
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq65 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq65 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks65
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq66 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq66 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks66
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq67 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq67 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks67
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq68 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq68 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks68
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq69 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq69 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks69
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq7 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq7 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks7
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq70 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq70 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks70
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq71 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq71 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks71
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq72 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq72 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks72
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq73 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq73 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks73
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq74 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq74 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks74
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq75 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq75 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks75
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq76 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq76 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks76
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq77 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq77 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks77
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq78 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq78 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks78
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq79 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq79 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks79
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq8 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq8 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks8
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq80 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq80 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks80
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq81 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq81 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks81
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq82 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq82 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks82
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq83 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq83 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks83
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq84 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq84 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks84
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq85 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq85 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks85
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq86 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq86 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks86
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq87 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq87 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks87
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq88 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq88 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks88
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq89 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq89 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks89
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq9 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq9 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks9
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq90 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq90 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks90
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq91 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq91 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks91
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq92 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq92 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks92
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq93 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq93 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks93
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq94 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq94 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks94
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq95 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq95 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks95
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq96 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq96 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks96
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq97 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq97 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks97
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq98 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq98 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks98
python /oak/stanford/groups/akundaje/marinovg/code/PEFastqToTabDelimited.py ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_1.fastq99 ATAC_pool1_CKDL230018740-1A_225KKJLT3_L2_2.fastq99 | python ~/code/demultiplexFASTQDualIndex.py - pool1config2 1 -suffix -chunks99
