java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq0 SRR8616840_2.fastq0 SRR8616840_1.fastq0.read1.paired.fastq.gz SRR8616840_1.fastq0.read1.unpaired.fastq.gz SRR8616840_1.fastq0.read2.paired.fastq.gz SRR8616840_1.fastq0.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq1 SRR8616840_2.fastq1 SRR8616840_1.fastq1.read1.paired.fastq.gz SRR8616840_1.fastq1.read1.unpaired.fastq.gz SRR8616840_1.fastq1.read2.paired.fastq.gz SRR8616840_1.fastq1.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq10 SRR8616840_2.fastq10 SRR8616840_1.fastq10.read1.paired.fastq.gz SRR8616840_1.fastq10.read1.unpaired.fastq.gz SRR8616840_1.fastq10.read2.paired.fastq.gz SRR8616840_1.fastq10.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq11 SRR8616840_2.fastq11 SRR8616840_1.fastq11.read1.paired.fastq.gz SRR8616840_1.fastq11.read1.unpaired.fastq.gz SRR8616840_1.fastq11.read2.paired.fastq.gz SRR8616840_1.fastq11.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq12 SRR8616840_2.fastq12 SRR8616840_1.fastq12.read1.paired.fastq.gz SRR8616840_1.fastq12.read1.unpaired.fastq.gz SRR8616840_1.fastq12.read2.paired.fastq.gz SRR8616840_1.fastq12.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq13 SRR8616840_2.fastq13 SRR8616840_1.fastq13.read1.paired.fastq.gz SRR8616840_1.fastq13.read1.unpaired.fastq.gz SRR8616840_1.fastq13.read2.paired.fastq.gz SRR8616840_1.fastq13.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq14 SRR8616840_2.fastq14 SRR8616840_1.fastq14.read1.paired.fastq.gz SRR8616840_1.fastq14.read1.unpaired.fastq.gz SRR8616840_1.fastq14.read2.paired.fastq.gz SRR8616840_1.fastq14.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq15 SRR8616840_2.fastq15 SRR8616840_1.fastq15.read1.paired.fastq.gz SRR8616840_1.fastq15.read1.unpaired.fastq.gz SRR8616840_1.fastq15.read2.paired.fastq.gz SRR8616840_1.fastq15.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq16 SRR8616840_2.fastq16 SRR8616840_1.fastq16.read1.paired.fastq.gz SRR8616840_1.fastq16.read1.unpaired.fastq.gz SRR8616840_1.fastq16.read2.paired.fastq.gz SRR8616840_1.fastq16.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq17 SRR8616840_2.fastq17 SRR8616840_1.fastq17.read1.paired.fastq.gz SRR8616840_1.fastq17.read1.unpaired.fastq.gz SRR8616840_1.fastq17.read2.paired.fastq.gz SRR8616840_1.fastq17.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq18 SRR8616840_2.fastq18 SRR8616840_1.fastq18.read1.paired.fastq.gz SRR8616840_1.fastq18.read1.unpaired.fastq.gz SRR8616840_1.fastq18.read2.paired.fastq.gz SRR8616840_1.fastq18.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq19 SRR8616840_2.fastq19 SRR8616840_1.fastq19.read1.paired.fastq.gz SRR8616840_1.fastq19.read1.unpaired.fastq.gz SRR8616840_1.fastq19.read2.paired.fastq.gz SRR8616840_1.fastq19.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq2 SRR8616840_2.fastq2 SRR8616840_1.fastq2.read1.paired.fastq.gz SRR8616840_1.fastq2.read1.unpaired.fastq.gz SRR8616840_1.fastq2.read2.paired.fastq.gz SRR8616840_1.fastq2.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq20 SRR8616840_2.fastq20 SRR8616840_1.fastq20.read1.paired.fastq.gz SRR8616840_1.fastq20.read1.unpaired.fastq.gz SRR8616840_1.fastq20.read2.paired.fastq.gz SRR8616840_1.fastq20.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq21 SRR8616840_2.fastq21 SRR8616840_1.fastq21.read1.paired.fastq.gz SRR8616840_1.fastq21.read1.unpaired.fastq.gz SRR8616840_1.fastq21.read2.paired.fastq.gz SRR8616840_1.fastq21.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq22 SRR8616840_2.fastq22 SRR8616840_1.fastq22.read1.paired.fastq.gz SRR8616840_1.fastq22.read1.unpaired.fastq.gz SRR8616840_1.fastq22.read2.paired.fastq.gz SRR8616840_1.fastq22.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq23 SRR8616840_2.fastq23 SRR8616840_1.fastq23.read1.paired.fastq.gz SRR8616840_1.fastq23.read1.unpaired.fastq.gz SRR8616840_1.fastq23.read2.paired.fastq.gz SRR8616840_1.fastq23.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq24 SRR8616840_2.fastq24 SRR8616840_1.fastq24.read1.paired.fastq.gz SRR8616840_1.fastq24.read1.unpaired.fastq.gz SRR8616840_1.fastq24.read2.paired.fastq.gz SRR8616840_1.fastq24.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq25 SRR8616840_2.fastq25 SRR8616840_1.fastq25.read1.paired.fastq.gz SRR8616840_1.fastq25.read1.unpaired.fastq.gz SRR8616840_1.fastq25.read2.paired.fastq.gz SRR8616840_1.fastq25.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq26 SRR8616840_2.fastq26 SRR8616840_1.fastq26.read1.paired.fastq.gz SRR8616840_1.fastq26.read1.unpaired.fastq.gz SRR8616840_1.fastq26.read2.paired.fastq.gz SRR8616840_1.fastq26.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq27 SRR8616840_2.fastq27 SRR8616840_1.fastq27.read1.paired.fastq.gz SRR8616840_1.fastq27.read1.unpaired.fastq.gz SRR8616840_1.fastq27.read2.paired.fastq.gz SRR8616840_1.fastq27.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq28 SRR8616840_2.fastq28 SRR8616840_1.fastq28.read1.paired.fastq.gz SRR8616840_1.fastq28.read1.unpaired.fastq.gz SRR8616840_1.fastq28.read2.paired.fastq.gz SRR8616840_1.fastq28.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq29 SRR8616840_2.fastq29 SRR8616840_1.fastq29.read1.paired.fastq.gz SRR8616840_1.fastq29.read1.unpaired.fastq.gz SRR8616840_1.fastq29.read2.paired.fastq.gz SRR8616840_1.fastq29.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq3 SRR8616840_2.fastq3 SRR8616840_1.fastq3.read1.paired.fastq.gz SRR8616840_1.fastq3.read1.unpaired.fastq.gz SRR8616840_1.fastq3.read2.paired.fastq.gz SRR8616840_1.fastq3.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq30 SRR8616840_2.fastq30 SRR8616840_1.fastq30.read1.paired.fastq.gz SRR8616840_1.fastq30.read1.unpaired.fastq.gz SRR8616840_1.fastq30.read2.paired.fastq.gz SRR8616840_1.fastq30.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq4 SRR8616840_2.fastq4 SRR8616840_1.fastq4.read1.paired.fastq.gz SRR8616840_1.fastq4.read1.unpaired.fastq.gz SRR8616840_1.fastq4.read2.paired.fastq.gz SRR8616840_1.fastq4.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq5 SRR8616840_2.fastq5 SRR8616840_1.fastq5.read1.paired.fastq.gz SRR8616840_1.fastq5.read1.unpaired.fastq.gz SRR8616840_1.fastq5.read2.paired.fastq.gz SRR8616840_1.fastq5.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq6 SRR8616840_2.fastq6 SRR8616840_1.fastq6.read1.paired.fastq.gz SRR8616840_1.fastq6.read1.unpaired.fastq.gz SRR8616840_1.fastq6.read2.paired.fastq.gz SRR8616840_1.fastq6.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq7 SRR8616840_2.fastq7 SRR8616840_1.fastq7.read1.paired.fastq.gz SRR8616840_1.fastq7.read1.unpaired.fastq.gz SRR8616840_1.fastq7.read2.paired.fastq.gz SRR8616840_1.fastq7.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq8 SRR8616840_2.fastq8 SRR8616840_1.fastq8.read1.paired.fastq.gz SRR8616840_1.fastq8.read1.unpaired.fastq.gz SRR8616840_1.fastq8.read2.paired.fastq.gz SRR8616840_1.fastq8.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616840_1.fastq9 SRR8616840_2.fastq9 SRR8616840_1.fastq9.read1.paired.fastq.gz SRR8616840_1.fastq9.read1.unpaired.fastq.gz SRR8616840_1.fastq9.read2.paired.fastq.gz SRR8616840_1.fastq9.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq0 SRR8616841_2.fastq0 SRR8616841_1.fastq0.read1.paired.fastq.gz SRR8616841_1.fastq0.read1.unpaired.fastq.gz SRR8616841_1.fastq0.read2.paired.fastq.gz SRR8616841_1.fastq0.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq1 SRR8616841_2.fastq1 SRR8616841_1.fastq1.read1.paired.fastq.gz SRR8616841_1.fastq1.read1.unpaired.fastq.gz SRR8616841_1.fastq1.read2.paired.fastq.gz SRR8616841_1.fastq1.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq10 SRR8616841_2.fastq10 SRR8616841_1.fastq10.read1.paired.fastq.gz SRR8616841_1.fastq10.read1.unpaired.fastq.gz SRR8616841_1.fastq10.read2.paired.fastq.gz SRR8616841_1.fastq10.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq11 SRR8616841_2.fastq11 SRR8616841_1.fastq11.read1.paired.fastq.gz SRR8616841_1.fastq11.read1.unpaired.fastq.gz SRR8616841_1.fastq11.read2.paired.fastq.gz SRR8616841_1.fastq11.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq12 SRR8616841_2.fastq12 SRR8616841_1.fastq12.read1.paired.fastq.gz SRR8616841_1.fastq12.read1.unpaired.fastq.gz SRR8616841_1.fastq12.read2.paired.fastq.gz SRR8616841_1.fastq12.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq13 SRR8616841_2.fastq13 SRR8616841_1.fastq13.read1.paired.fastq.gz SRR8616841_1.fastq13.read1.unpaired.fastq.gz SRR8616841_1.fastq13.read2.paired.fastq.gz SRR8616841_1.fastq13.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq14 SRR8616841_2.fastq14 SRR8616841_1.fastq14.read1.paired.fastq.gz SRR8616841_1.fastq14.read1.unpaired.fastq.gz SRR8616841_1.fastq14.read2.paired.fastq.gz SRR8616841_1.fastq14.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq15 SRR8616841_2.fastq15 SRR8616841_1.fastq15.read1.paired.fastq.gz SRR8616841_1.fastq15.read1.unpaired.fastq.gz SRR8616841_1.fastq15.read2.paired.fastq.gz SRR8616841_1.fastq15.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq16 SRR8616841_2.fastq16 SRR8616841_1.fastq16.read1.paired.fastq.gz SRR8616841_1.fastq16.read1.unpaired.fastq.gz SRR8616841_1.fastq16.read2.paired.fastq.gz SRR8616841_1.fastq16.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq17 SRR8616841_2.fastq17 SRR8616841_1.fastq17.read1.paired.fastq.gz SRR8616841_1.fastq17.read1.unpaired.fastq.gz SRR8616841_1.fastq17.read2.paired.fastq.gz SRR8616841_1.fastq17.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq18 SRR8616841_2.fastq18 SRR8616841_1.fastq18.read1.paired.fastq.gz SRR8616841_1.fastq18.read1.unpaired.fastq.gz SRR8616841_1.fastq18.read2.paired.fastq.gz SRR8616841_1.fastq18.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq19 SRR8616841_2.fastq19 SRR8616841_1.fastq19.read1.paired.fastq.gz SRR8616841_1.fastq19.read1.unpaired.fastq.gz SRR8616841_1.fastq19.read2.paired.fastq.gz SRR8616841_1.fastq19.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq2 SRR8616841_2.fastq2 SRR8616841_1.fastq2.read1.paired.fastq.gz SRR8616841_1.fastq2.read1.unpaired.fastq.gz SRR8616841_1.fastq2.read2.paired.fastq.gz SRR8616841_1.fastq2.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq20 SRR8616841_2.fastq20 SRR8616841_1.fastq20.read1.paired.fastq.gz SRR8616841_1.fastq20.read1.unpaired.fastq.gz SRR8616841_1.fastq20.read2.paired.fastq.gz SRR8616841_1.fastq20.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq21 SRR8616841_2.fastq21 SRR8616841_1.fastq21.read1.paired.fastq.gz SRR8616841_1.fastq21.read1.unpaired.fastq.gz SRR8616841_1.fastq21.read2.paired.fastq.gz SRR8616841_1.fastq21.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq22 SRR8616841_2.fastq22 SRR8616841_1.fastq22.read1.paired.fastq.gz SRR8616841_1.fastq22.read1.unpaired.fastq.gz SRR8616841_1.fastq22.read2.paired.fastq.gz SRR8616841_1.fastq22.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq23 SRR8616841_2.fastq23 SRR8616841_1.fastq23.read1.paired.fastq.gz SRR8616841_1.fastq23.read1.unpaired.fastq.gz SRR8616841_1.fastq23.read2.paired.fastq.gz SRR8616841_1.fastq23.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq24 SRR8616841_2.fastq24 SRR8616841_1.fastq24.read1.paired.fastq.gz SRR8616841_1.fastq24.read1.unpaired.fastq.gz SRR8616841_1.fastq24.read2.paired.fastq.gz SRR8616841_1.fastq24.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq25 SRR8616841_2.fastq25 SRR8616841_1.fastq25.read1.paired.fastq.gz SRR8616841_1.fastq25.read1.unpaired.fastq.gz SRR8616841_1.fastq25.read2.paired.fastq.gz SRR8616841_1.fastq25.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq26 SRR8616841_2.fastq26 SRR8616841_1.fastq26.read1.paired.fastq.gz SRR8616841_1.fastq26.read1.unpaired.fastq.gz SRR8616841_1.fastq26.read2.paired.fastq.gz SRR8616841_1.fastq26.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq27 SRR8616841_2.fastq27 SRR8616841_1.fastq27.read1.paired.fastq.gz SRR8616841_1.fastq27.read1.unpaired.fastq.gz SRR8616841_1.fastq27.read2.paired.fastq.gz SRR8616841_1.fastq27.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq28 SRR8616841_2.fastq28 SRR8616841_1.fastq28.read1.paired.fastq.gz SRR8616841_1.fastq28.read1.unpaired.fastq.gz SRR8616841_1.fastq28.read2.paired.fastq.gz SRR8616841_1.fastq28.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq29 SRR8616841_2.fastq29 SRR8616841_1.fastq29.read1.paired.fastq.gz SRR8616841_1.fastq29.read1.unpaired.fastq.gz SRR8616841_1.fastq29.read2.paired.fastq.gz SRR8616841_1.fastq29.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq3 SRR8616841_2.fastq3 SRR8616841_1.fastq3.read1.paired.fastq.gz SRR8616841_1.fastq3.read1.unpaired.fastq.gz SRR8616841_1.fastq3.read2.paired.fastq.gz SRR8616841_1.fastq3.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq30 SRR8616841_2.fastq30 SRR8616841_1.fastq30.read1.paired.fastq.gz SRR8616841_1.fastq30.read1.unpaired.fastq.gz SRR8616841_1.fastq30.read2.paired.fastq.gz SRR8616841_1.fastq30.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq31 SRR8616841_2.fastq31 SRR8616841_1.fastq31.read1.paired.fastq.gz SRR8616841_1.fastq31.read1.unpaired.fastq.gz SRR8616841_1.fastq31.read2.paired.fastq.gz SRR8616841_1.fastq31.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq32 SRR8616841_2.fastq32 SRR8616841_1.fastq32.read1.paired.fastq.gz SRR8616841_1.fastq32.read1.unpaired.fastq.gz SRR8616841_1.fastq32.read2.paired.fastq.gz SRR8616841_1.fastq32.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq33 SRR8616841_2.fastq33 SRR8616841_1.fastq33.read1.paired.fastq.gz SRR8616841_1.fastq33.read1.unpaired.fastq.gz SRR8616841_1.fastq33.read2.paired.fastq.gz SRR8616841_1.fastq33.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq34 SRR8616841_2.fastq34 SRR8616841_1.fastq34.read1.paired.fastq.gz SRR8616841_1.fastq34.read1.unpaired.fastq.gz SRR8616841_1.fastq34.read2.paired.fastq.gz SRR8616841_1.fastq34.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq35 SRR8616841_2.fastq35 SRR8616841_1.fastq35.read1.paired.fastq.gz SRR8616841_1.fastq35.read1.unpaired.fastq.gz SRR8616841_1.fastq35.read2.paired.fastq.gz SRR8616841_1.fastq35.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq36 SRR8616841_2.fastq36 SRR8616841_1.fastq36.read1.paired.fastq.gz SRR8616841_1.fastq36.read1.unpaired.fastq.gz SRR8616841_1.fastq36.read2.paired.fastq.gz SRR8616841_1.fastq36.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq37 SRR8616841_2.fastq37 SRR8616841_1.fastq37.read1.paired.fastq.gz SRR8616841_1.fastq37.read1.unpaired.fastq.gz SRR8616841_1.fastq37.read2.paired.fastq.gz SRR8616841_1.fastq37.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq38 SRR8616841_2.fastq38 SRR8616841_1.fastq38.read1.paired.fastq.gz SRR8616841_1.fastq38.read1.unpaired.fastq.gz SRR8616841_1.fastq38.read2.paired.fastq.gz SRR8616841_1.fastq38.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq39 SRR8616841_2.fastq39 SRR8616841_1.fastq39.read1.paired.fastq.gz SRR8616841_1.fastq39.read1.unpaired.fastq.gz SRR8616841_1.fastq39.read2.paired.fastq.gz SRR8616841_1.fastq39.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq4 SRR8616841_2.fastq4 SRR8616841_1.fastq4.read1.paired.fastq.gz SRR8616841_1.fastq4.read1.unpaired.fastq.gz SRR8616841_1.fastq4.read2.paired.fastq.gz SRR8616841_1.fastq4.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq40 SRR8616841_2.fastq40 SRR8616841_1.fastq40.read1.paired.fastq.gz SRR8616841_1.fastq40.read1.unpaired.fastq.gz SRR8616841_1.fastq40.read2.paired.fastq.gz SRR8616841_1.fastq40.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq41 SRR8616841_2.fastq41 SRR8616841_1.fastq41.read1.paired.fastq.gz SRR8616841_1.fastq41.read1.unpaired.fastq.gz SRR8616841_1.fastq41.read2.paired.fastq.gz SRR8616841_1.fastq41.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq42 SRR8616841_2.fastq42 SRR8616841_1.fastq42.read1.paired.fastq.gz SRR8616841_1.fastq42.read1.unpaired.fastq.gz SRR8616841_1.fastq42.read2.paired.fastq.gz SRR8616841_1.fastq42.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq43 SRR8616841_2.fastq43 SRR8616841_1.fastq43.read1.paired.fastq.gz SRR8616841_1.fastq43.read1.unpaired.fastq.gz SRR8616841_1.fastq43.read2.paired.fastq.gz SRR8616841_1.fastq43.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq44 SRR8616841_2.fastq44 SRR8616841_1.fastq44.read1.paired.fastq.gz SRR8616841_1.fastq44.read1.unpaired.fastq.gz SRR8616841_1.fastq44.read2.paired.fastq.gz SRR8616841_1.fastq44.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq45 SRR8616841_2.fastq45 SRR8616841_1.fastq45.read1.paired.fastq.gz SRR8616841_1.fastq45.read1.unpaired.fastq.gz SRR8616841_1.fastq45.read2.paired.fastq.gz SRR8616841_1.fastq45.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq46 SRR8616841_2.fastq46 SRR8616841_1.fastq46.read1.paired.fastq.gz SRR8616841_1.fastq46.read1.unpaired.fastq.gz SRR8616841_1.fastq46.read2.paired.fastq.gz SRR8616841_1.fastq46.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq47 SRR8616841_2.fastq47 SRR8616841_1.fastq47.read1.paired.fastq.gz SRR8616841_1.fastq47.read1.unpaired.fastq.gz SRR8616841_1.fastq47.read2.paired.fastq.gz SRR8616841_1.fastq47.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq48 SRR8616841_2.fastq48 SRR8616841_1.fastq48.read1.paired.fastq.gz SRR8616841_1.fastq48.read1.unpaired.fastq.gz SRR8616841_1.fastq48.read2.paired.fastq.gz SRR8616841_1.fastq48.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq49 SRR8616841_2.fastq49 SRR8616841_1.fastq49.read1.paired.fastq.gz SRR8616841_1.fastq49.read1.unpaired.fastq.gz SRR8616841_1.fastq49.read2.paired.fastq.gz SRR8616841_1.fastq49.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq5 SRR8616841_2.fastq5 SRR8616841_1.fastq5.read1.paired.fastq.gz SRR8616841_1.fastq5.read1.unpaired.fastq.gz SRR8616841_1.fastq5.read2.paired.fastq.gz SRR8616841_1.fastq5.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq50 SRR8616841_2.fastq50 SRR8616841_1.fastq50.read1.paired.fastq.gz SRR8616841_1.fastq50.read1.unpaired.fastq.gz SRR8616841_1.fastq50.read2.paired.fastq.gz SRR8616841_1.fastq50.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq51 SRR8616841_2.fastq51 SRR8616841_1.fastq51.read1.paired.fastq.gz SRR8616841_1.fastq51.read1.unpaired.fastq.gz SRR8616841_1.fastq51.read2.paired.fastq.gz SRR8616841_1.fastq51.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq52 SRR8616841_2.fastq52 SRR8616841_1.fastq52.read1.paired.fastq.gz SRR8616841_1.fastq52.read1.unpaired.fastq.gz SRR8616841_1.fastq52.read2.paired.fastq.gz SRR8616841_1.fastq52.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq53 SRR8616841_2.fastq53 SRR8616841_1.fastq53.read1.paired.fastq.gz SRR8616841_1.fastq53.read1.unpaired.fastq.gz SRR8616841_1.fastq53.read2.paired.fastq.gz SRR8616841_1.fastq53.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq54 SRR8616841_2.fastq54 SRR8616841_1.fastq54.read1.paired.fastq.gz SRR8616841_1.fastq54.read1.unpaired.fastq.gz SRR8616841_1.fastq54.read2.paired.fastq.gz SRR8616841_1.fastq54.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq55 SRR8616841_2.fastq55 SRR8616841_1.fastq55.read1.paired.fastq.gz SRR8616841_1.fastq55.read1.unpaired.fastq.gz SRR8616841_1.fastq55.read2.paired.fastq.gz SRR8616841_1.fastq55.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq56 SRR8616841_2.fastq56 SRR8616841_1.fastq56.read1.paired.fastq.gz SRR8616841_1.fastq56.read1.unpaired.fastq.gz SRR8616841_1.fastq56.read2.paired.fastq.gz SRR8616841_1.fastq56.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq57 SRR8616841_2.fastq57 SRR8616841_1.fastq57.read1.paired.fastq.gz SRR8616841_1.fastq57.read1.unpaired.fastq.gz SRR8616841_1.fastq57.read2.paired.fastq.gz SRR8616841_1.fastq57.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq58 SRR8616841_2.fastq58 SRR8616841_1.fastq58.read1.paired.fastq.gz SRR8616841_1.fastq58.read1.unpaired.fastq.gz SRR8616841_1.fastq58.read2.paired.fastq.gz SRR8616841_1.fastq58.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq59 SRR8616841_2.fastq59 SRR8616841_1.fastq59.read1.paired.fastq.gz SRR8616841_1.fastq59.read1.unpaired.fastq.gz SRR8616841_1.fastq59.read2.paired.fastq.gz SRR8616841_1.fastq59.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq6 SRR8616841_2.fastq6 SRR8616841_1.fastq6.read1.paired.fastq.gz SRR8616841_1.fastq6.read1.unpaired.fastq.gz SRR8616841_1.fastq6.read2.paired.fastq.gz SRR8616841_1.fastq6.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq60 SRR8616841_2.fastq60 SRR8616841_1.fastq60.read1.paired.fastq.gz SRR8616841_1.fastq60.read1.unpaired.fastq.gz SRR8616841_1.fastq60.read2.paired.fastq.gz SRR8616841_1.fastq60.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq61 SRR8616841_2.fastq61 SRR8616841_1.fastq61.read1.paired.fastq.gz SRR8616841_1.fastq61.read1.unpaired.fastq.gz SRR8616841_1.fastq61.read2.paired.fastq.gz SRR8616841_1.fastq61.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq62 SRR8616841_2.fastq62 SRR8616841_1.fastq62.read1.paired.fastq.gz SRR8616841_1.fastq62.read1.unpaired.fastq.gz SRR8616841_1.fastq62.read2.paired.fastq.gz SRR8616841_1.fastq62.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq63 SRR8616841_2.fastq63 SRR8616841_1.fastq63.read1.paired.fastq.gz SRR8616841_1.fastq63.read1.unpaired.fastq.gz SRR8616841_1.fastq63.read2.paired.fastq.gz SRR8616841_1.fastq63.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq64 SRR8616841_2.fastq64 SRR8616841_1.fastq64.read1.paired.fastq.gz SRR8616841_1.fastq64.read1.unpaired.fastq.gz SRR8616841_1.fastq64.read2.paired.fastq.gz SRR8616841_1.fastq64.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq65 SRR8616841_2.fastq65 SRR8616841_1.fastq65.read1.paired.fastq.gz SRR8616841_1.fastq65.read1.unpaired.fastq.gz SRR8616841_1.fastq65.read2.paired.fastq.gz SRR8616841_1.fastq65.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq66 SRR8616841_2.fastq66 SRR8616841_1.fastq66.read1.paired.fastq.gz SRR8616841_1.fastq66.read1.unpaired.fastq.gz SRR8616841_1.fastq66.read2.paired.fastq.gz SRR8616841_1.fastq66.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq67 SRR8616841_2.fastq67 SRR8616841_1.fastq67.read1.paired.fastq.gz SRR8616841_1.fastq67.read1.unpaired.fastq.gz SRR8616841_1.fastq67.read2.paired.fastq.gz SRR8616841_1.fastq67.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq68 SRR8616841_2.fastq68 SRR8616841_1.fastq68.read1.paired.fastq.gz SRR8616841_1.fastq68.read1.unpaired.fastq.gz SRR8616841_1.fastq68.read2.paired.fastq.gz SRR8616841_1.fastq68.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq69 SRR8616841_2.fastq69 SRR8616841_1.fastq69.read1.paired.fastq.gz SRR8616841_1.fastq69.read1.unpaired.fastq.gz SRR8616841_1.fastq69.read2.paired.fastq.gz SRR8616841_1.fastq69.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq7 SRR8616841_2.fastq7 SRR8616841_1.fastq7.read1.paired.fastq.gz SRR8616841_1.fastq7.read1.unpaired.fastq.gz SRR8616841_1.fastq7.read2.paired.fastq.gz SRR8616841_1.fastq7.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq70 SRR8616841_2.fastq70 SRR8616841_1.fastq70.read1.paired.fastq.gz SRR8616841_1.fastq70.read1.unpaired.fastq.gz SRR8616841_1.fastq70.read2.paired.fastq.gz SRR8616841_1.fastq70.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq71 SRR8616841_2.fastq71 SRR8616841_1.fastq71.read1.paired.fastq.gz SRR8616841_1.fastq71.read1.unpaired.fastq.gz SRR8616841_1.fastq71.read2.paired.fastq.gz SRR8616841_1.fastq71.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq72 SRR8616841_2.fastq72 SRR8616841_1.fastq72.read1.paired.fastq.gz SRR8616841_1.fastq72.read1.unpaired.fastq.gz SRR8616841_1.fastq72.read2.paired.fastq.gz SRR8616841_1.fastq72.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq8 SRR8616841_2.fastq8 SRR8616841_1.fastq8.read1.paired.fastq.gz SRR8616841_1.fastq8.read1.unpaired.fastq.gz SRR8616841_1.fastq8.read2.paired.fastq.gz SRR8616841_1.fastq8.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &
java -jar /oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/trimmomatic-0.36.jar PE SRR8616841_1.fastq9 SRR8616841_2.fastq9 SRR8616841_1.fastq9.read1.paired.fastq.gz SRR8616841_1.fastq9.read1.unpaired.fastq.gz SRR8616841_1.fastq9.read2.paired.fastq.gz SRR8616841_1.fastq9.read2.unpaired.fastq.gz ILLUMINACLIP:/oak/stanford/groups/akundaje/marinovg/programs/Trimmomatic-0.36/adapters/adapters.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36 &