python /oak/stanford/groups/akundaje/marinovg/code/bedRPKMfromBAM.py L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_eugenii-me-1k.unique.dedup.MACS-2.1.0_peaks.narrowPeak 0 L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_eugenii-me-1k.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals/Macropus_eugenii-me-1k-DNAZoo/Macropus_eugenii-me-1k.chrom.sizes L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_eugenii-me-1k.unique.dedup.MACS-2.1.0_peaks.narrowPeak.RPM -RPM -uniqueBAM &
python /oak/stanford/groups/akundaje/marinovg/code/bedRPKMfromBAM.py L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_eugenii-me-1k.unique.dedup.MACS-2.1.0_peaks.narrowPeak 0 L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_eugenii-me-1k.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals/Macropus_eugenii-me-1k-DNAZoo/Macropus_eugenii-me-1k.chrom.sizes L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_eugenii-me-1k.unique.dedup.MACS-2.1.0_peaks.narrowPeak.RPM -RPM -uniqueBAM &
python /oak/stanford/groups/akundaje/marinovg/code/bedRPKMfromBAM.py L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_rufus-mr-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak 0 L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_rufus-mr-2k.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals/Macropus_rufus-mr-2k-DNAZoo/Macropus_rufus-mr-2k.chrom.sizes L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_rufus-mr-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak.RPM -RPM -uniqueBAM &
python /oak/stanford/groups/akundaje/marinovg/code/bedRPKMfromBAM.py L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_rufus-mr-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak 0 L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_rufus-mr-2k.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals/Macropus_rufus-mr-2k-DNAZoo/Macropus_rufus-mr-2k.chrom.sizes L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_rufus-mr-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak.RPM -RPM -uniqueBAM &
python /oak/stanford/groups/akundaje/marinovg/code/bedRPKMfromBAM.py L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_fuliginosus-mf-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak 0 L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_fuliginosus-mf-2k.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals/Macropus_fuliginosus-mf-2k-DNAZoo/Macropus_fuliginosus-mf-2k.chrom.sizes L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_fuliginosus-mf-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak.RPM -RPM -uniqueBAM &
python /oak/stanford/groups/akundaje/marinovg/code/bedRPKMfromBAM.py L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_fuliginosus-mf-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak 0 L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_fuliginosus-mf-2k.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals/Macropus_fuliginosus-mf-2k-DNAZoo/Macropus_fuliginosus-mf-2k.chrom.sizes L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_fuliginosus-mf-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak.RPM -RPM -uniqueBAM &
python /oak/stanford/groups/akundaje/marinovg/code/bedRPKMfromBAM.py L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_giganteus-mg-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak 0 L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_giganteus-mg-2k.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals/Macropus_giganteus-mg-2k-DNAZoo/Macropus_giganteus-mg-2k.chrom.sizes L879-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_giganteus-mg-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak.RPM -RPM -uniqueBAM &
python /oak/stanford/groups/akundaje/marinovg/code/bedRPKMfromBAM.py L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_giganteus-mg-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak 0 L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_giganteus-mg-2k.unique.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals/Macropus_giganteus-mg-2k-DNAZoo/Macropus_giganteus-mg-2k.chrom.sizes L878-Bennetts_wallaby_ID_TCH4030_Sample2413_Macropus_rufogriseus.2x36mers.Macropus_giganteus-mg-2k.unique.dedup.MACS-2.1.0_peaks.narrowPeak.RPM -RPM -uniqueBAM &