## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[MNase-GAF-RNAi-Rep3-GSM1423062.2x36mers.unique.bam] OUTPUT=MNase-GAF-RNAi-Rep3-GSM1423062.2x36mers.unique.dedup.bam METRICS_FILE=MNase-GAF-RNAi-Rep3-GSM1423062.2x36mers.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon May 07 17:22:10 PDT 2018

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	12116997	29666446	0	356774	0	0.029444	201703637

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.941696
3.0	2.828486
4.0	3.663573
5.0	4.44997
6.0	5.190517
7.0	5.887887
8.0	6.544596
9.0	7.163017
10.0	7.745381
11.0	8.293791
12.0	8.810226
13.0	9.29655
14.0	9.75452
15.0	10.185788
16.0	10.591911
17.0	10.974355
18.0	11.334501
19.0	11.673649
20.0	11.993023
21.0	12.293777
22.0	12.576994
23.0	12.8437
24.0	13.094854
25.0	13.331366
26.0	13.554088
27.0	13.763824
28.0	13.961331
29.0	14.147324
30.0	14.322471
31.0	14.487407
32.0	14.642727
33.0	14.78899
34.0	14.926726
35.0	15.056431
36.0	15.178574
37.0	15.293595
38.0	15.401911
39.0	15.50391
40.0	15.599963
41.0	15.690416
42.0	15.775594
43.0	15.855807
44.0	15.931342
45.0	16.002474
46.0	16.069458
47.0	16.132537
48.0	16.191938
49.0	16.247876
50.0	16.300552
51.0	16.350157
52.0	16.39687
53.0	16.440859
54.0	16.482284
55.0	16.521293
56.0	16.558028
57.0	16.592621
58.0	16.625197
59.0	16.655874
60.0	16.684762
61.0	16.711966
62.0	16.737583
63.0	16.761707
64.0	16.784425
65.0	16.805818
66.0	16.825964
67.0	16.844935
68.0	16.8628
69.0	16.879623
70.0	16.895466
71.0	16.910385
72.0	16.924434
73.0	16.937664
74.0	16.950122
75.0	16.961855
76.0	16.972903
77.0	16.983307
78.0	16.993104
79.0	17.00233
80.0	17.011018
81.0	17.0192
82.0	17.026905
83.0	17.03416
84.0	17.040992
85.0	17.047426
86.0	17.053485
87.0	17.059191
88.0	17.064564
89.0	17.069624
90.0	17.074388
91.0	17.078875
92.0	17.0831
93.0	17.087079
94.0	17.090826
95.0	17.094355
96.0	17.097678
97.0	17.100807
98.0	17.103753
99.0	17.106528
100.0	17.109141