## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[MNase-GAF-RNAi-Rep2-GSM1423061.2x36mers.unique.bam] OUTPUT=MNase-GAF-RNAi-Rep2-GSM1423061.2x36mers.unique.dedup.bam METRICS_FILE=MNase-GAF-RNAi-Rep2-GSM1423061.2x36mers.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon May 07 17:22:10 PDT 2018

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	15806537	31983430	0	612986	0	0.038781	198491089

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.923455
3.0	2.776223
4.0	3.563717
5.0	4.290931
6.0	4.962481
7.0	5.582626
8.0	6.155303
9.0	6.684144
10.0	7.172504
11.0	7.623483
12.0	8.039941
13.0	8.424522
14.0	8.779665
15.0	9.107623
16.0	9.410478
17.0	9.69015
18.0	9.948415
19.0	10.186911
20.0	10.407152
21.0	10.610534
22.0	10.798348
23.0	10.971785
24.0	11.131947
25.0	11.27985
26.0	11.416431
27.0	11.542557
28.0	11.659029
29.0	11.766586
30.0	11.865909
31.0	11.95763
32.0	12.04233
33.0	12.120547
34.0	12.192777
35.0	12.259478
36.0	12.321073
37.0	12.377953
38.0	12.43048
39.0	12.478985
40.0	12.523778
41.0	12.565142
42.0	12.60334
43.0	12.638614
44.0	12.671189
45.0	12.701269
46.0	12.729047
47.0	12.754699
48.0	12.778387
49.0	12.800262
50.0	12.820463
51.0	12.839118
52.0	12.856344
53.0	12.872252
54.0	12.886942
55.0	12.900508
56.0	12.913035
57.0	12.924604
58.0	12.935286
59.0	12.945152
60.0	12.954262
61.0	12.962674
62.0	12.970443
63.0	12.977617
64.0	12.984242
65.0	12.99036
66.0	12.99601
67.0	13.001227
68.0	13.006045
69.0	13.010494
70.0	13.014602
71.0	13.018396
72.0	13.0219
73.0	13.025135
74.0	13.028123
75.0	13.030882
76.0	13.03343
77.0	13.035782
78.0	13.037955
79.0	13.039962
80.0	13.041814
81.0	13.043525
82.0	13.045105
83.0	13.046564
84.0	13.047912
85.0	13.049156
86.0	13.050305
87.0	13.051366
88.0	13.052346
89.0	13.053251
90.0	13.054086
91.0	13.054858
92.0	13.055571
93.0	13.056229
94.0	13.056836
95.0	13.057397
96.0	13.057916
97.0	13.058394
98.0	13.058836
99.0	13.059244
100.0	13.059621