Index of /kundaje/marinovg/oak/ENCODE4/Chromatin-nanopores/2025-09-27-NextSeq-run

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]2016-11-16-refFlat.TSS-profile-L4376-HFF_MOI3_48hpi_noPFA_1.hg38.allC2025-09-29 21:38 94K 
[ ]2016-11-16-refFlat.TSS-profile-L4377-HFF_MOI3_48hpi_noPFA_2.hg38.allC2025-09-29 21:50 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4378-HFF_MOI3_48hpi_noPFA_3.hg38.allC2025-09-29 21:53 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4379-HFF_MOI3_48hpi_noPFA_4.hg38.allC2025-09-29 21:50 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4380-HFF_MOI3_1hpi_noPFA_1.hg38.allC2025-09-29 21:49 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4381-HFF_MOI3_1hpi_noPFA_2.hg38.allC2025-09-29 21:59 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4382-HFF_MOI3_4hpi_noPFA_1.hg38.allC2025-09-29 21:47 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4383-HFF_MOI3_4hpi_noPFA_2.hg38.allC2025-09-29 21:47 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4384-HFF_MOI3_6hpi_noPFA_1.hg38.allC2025-09-29 21:41 93K 
[ ]2016-11-16-refFlat.TSS-profile-L4385-HFF_MOI3_6hpi_noPFA_2.hg38.allC2025-09-29 21:48 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4386-HFF_MOI3_12hpi_noPFA_1.hg38.allC2025-09-29 21:51 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4387-HFF_MOI3_12hpi_noPFA_2.hg38.allC2025-09-29 21:50 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4388-HFF_MOI3_24hpi_noPFA_1.hg38.allC2025-09-29 22:00 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4389-HFF_MOI3_24hpi_noPFA_2.hg38.allC2025-09-29 21:52 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4390-HFF_MOI3_72hpi_noPFA_1.hg38.allC2025-09-29 21:53 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4391-HFF_MOI3_72hpi_noPFA_2.hg38.allC2025-09-29 21:56 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4392-HFF_MOI3_96hpi_noPFA_1.hg38.allC2025-09-29 21:57 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4393-HFF_MOI3_96hpi_noPFA_2.hg38.allC2025-09-29 21:57 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4394-HFF_MOI3_120hpi_noPFA_1.hg38.allC2025-09-29 21:53 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4395-HFF_MOI3_120hpi_noPFA_2.hg38.allC2025-09-29 22:00 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4396-HFF_MOI3_72hpi_1hPFA_1.hg38.allC2025-09-29 21:58 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4397-HFF_MOI3_72hpi_1hPFA_2.hg38.allC2025-09-29 22:01 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4398-HFF_MOI3_72hpi_48hPFA_1.hg38.allC2025-09-29 22:01 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4399-HFF_MOI3_72hpi_48hPFA_2.hg38.allC2025-09-29 22:04 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4376-HFF_MOI3_48hpi_noPFA_1.hg38.allC2025-09-29 21:55 94K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4377-HFF_MOI3_48hpi_noPFA_2.hg38.allC2025-09-29 22:06 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4378-HFF_MOI3_48hpi_noPFA_3.hg38.allC2025-09-29 22:08 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4379-HFF_MOI3_48hpi_noPFA_4.hg38.allC2025-09-29 22:13 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4380-HFF_MOI3_1hpi_noPFA_1.hg38.allC2025-09-29 22:12 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4381-HFF_MOI3_1hpi_noPFA_2.hg38.allC2025-09-29 22:14 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4382-HFF_MOI3_4hpi_noPFA_1.hg38.allC2025-09-29 22:11 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4383-HFF_MOI3_4hpi_noPFA_2.hg38.allC2025-09-29 22:15 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4384-HFF_MOI3_6hpi_noPFA_1.hg38.allC2025-09-29 22:01 94K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4385-HFF_MOI3_6hpi_noPFA_2.hg38.allC2025-09-29 22:08 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4386-HFF_MOI3_12hpi_noPFA_1.hg38.allC2025-09-29 22:08 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4387-HFF_MOI3_12hpi_noPFA_2.hg38.allC2025-09-29 22:14 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4388-HFF_MOI3_24hpi_noPFA_1.hg38.allC2025-09-29 22:17 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4389-HFF_MOI3_24hpi_noPFA_2.hg38.allC2025-09-29 22:12 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4390-HFF_MOI3_72hpi_noPFA_1.hg38.allC2025-09-29 22:11 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4391-HFF_MOI3_72hpi_noPFA_2.hg38.allC2025-09-29 22:14 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4392-HFF_MOI3_96hpi_noPFA_1.hg38.allC2025-09-29 22:13 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4393-HFF_MOI3_96hpi_noPFA_2.hg38.allC2025-09-29 22:14 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4394-HFF_MOI3_120hpi_noPFA_1.hg38.allC2025-09-29 22:13 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4395-HFF_MOI3_120hpi_noPFA_2.hg38.allC2025-09-29 22:13 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4396-HFF_MOI3_72hpi_1hPFA_1.hg38.allC2025-09-29 22:13 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4397-HFF_MOI3_72hpi_1hPFA_2.hg38.allC2025-09-29 22:13 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4398-HFF_MOI3_72hpi_48hPFA_1.hg38.allC2025-09-29 22:16 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4399-HFF_MOI3_72hpi_48hPFA_2.hg38.allC2025-09-29 22:16 97K 
[ ]SAMstats-files.tar.gz2025-09-30 02:03 2.4K 
[ ]SAMstats.files2025-09-30 02:02 6.6K 
[ ]SAMstats.table2025-09-30 02:02 5.2K 
[TXT]SampleSheet.csv2025-09-29 13:52 2.1K 
[DIR]U001-1001_Input-STAR-2.5.3a/2025-10-13 22:40 -  
[TXT]U001-1001_Input.1x75mers.a.e200.offrate1.bam2025-09-29 17:42 256M 
[ ]U001-1001_Input.250811_NB551514_0334_AHCCFCBGYX.end1.fastq.gz2025-09-29 16:09 174M 
[DIR]U005-2551_Input-STAR-2.5.3a/2025-10-13 22:40 -  
[TXT]U005-2551_Input.1x75mers.a.e200.offrate1.bam2025-09-29 17:44 538M 
[ ]U005-2551_Input.250811_NB551514_0334_AHCCFCBGYX.end1.fastq.gz2025-09-29 16:09 406M 
[DIR]U011-1001_IP-STAR-2.5.3a/2025-10-13 22:40 -  
[TXT]U011-1001_IP.1x75mers.a.e200.offrate1.bam2025-09-29 17:41 129M 
[ ]U011-1001_IP.250811_NB551514_0334_AHCCFCBGYX.end1.fastq.gz2025-09-29 16:09 80M 
[DIR]U015-2551_IP-STAR-2.5.3a/2025-10-13 22:40 -  
[TXT]U015-2551_IP.1x75mers.a.e200.offrate1.bam2025-09-29 17:42 231M 
[ ]U015-2551_IP.250811_NB551514_0334_AHCCFCBGYX.end1.fastq.gz2025-09-29 16:09 155M 
[ ]all.250927_NB551514_0360_AHWH33BGYW.fastq.lines2025-09-29 16:25 11  
[ ]coverage-U001-1001_Input-STAR-2.5.3a.hg382025-09-30 02:45 2.2K 
[ ]coverage-U005-2551_Input-STAR-2.5.3a.hg382025-09-30 02:45 2.1K 
[ ]coverage-U011-1001_IP-STAR-2.5.3a.hg382025-09-30 02:45 2.1K 
[ ]coverage-U015-2551_IP-STAR-2.5.3a.hg382025-09-30 02:45 2.1K 
[DIR]express-1.5.1-U001-1001_Input/2025-09-29 21:29 -  
[DIR]express-1.5.1-U005-2551_Input/2025-09-29 21:34 -  
[DIR]express-1.5.1-U011-1001_IP/2025-09-29 21:27 -  
[DIR]express-1.5.1-U015-2551_IP/2025-09-29 21:26 -  
[ ]merlin-tiles-profiles-L4376-HFF_MOI3_48hpi_noPFA_1.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4377-HFF_MOI3_48hpi_noPFA_2.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4378-HFF_MOI3_48hpi_noPFA_3.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4379-HFF_MOI3_48hpi_noPFA_4.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4380-HFF_MOI3_1hpi_noPFA_1.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4381-HFF_MOI3_1hpi_noPFA_2.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4382-HFF_MOI3_4hpi_noPFA_1.HCMV-merlin.allC2025-09-30 02:35 94K 
[ ]merlin-tiles-profiles-L4383-HFF_MOI3_4hpi_noPFA_2.HCMV-merlin.allC2025-09-30 02:35 94K 
[ ]merlin-tiles-profiles-L4384-HFF_MOI3_6hpi_noPFA_1.HCMV-merlin.allC2025-09-30 02:35 71K 
[ ]merlin-tiles-profiles-L4385-HFF_MOI3_6hpi_noPFA_2.HCMV-merlin.allC2025-09-30 02:35 92K 
[ ]merlin-tiles-profiles-L4386-HFF_MOI3_12hpi_noPFA_1.HCMV-merlin.allC2025-09-30 02:35 88K 
[ ]merlin-tiles-profiles-L4387-HFF_MOI3_12hpi_noPFA_2.HCMV-merlin.allC2025-09-30 02:35 92K 
[ ]merlin-tiles-profiles-L4388-HFF_MOI3_24hpi_noPFA_1.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4389-HFF_MOI3_24hpi_noPFA_2.HCMV-merlin.allC2025-09-30 02:35 94K 
[ ]merlin-tiles-profiles-L4390-HFF_MOI3_72hpi_noPFA_1.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4391-HFF_MOI3_72hpi_noPFA_2.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4392-HFF_MOI3_96hpi_noPFA_1.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4393-HFF_MOI3_96hpi_noPFA_2.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4394-HFF_MOI3_120hpi_noPFA_1.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4395-HFF_MOI3_120hpi_noPFA_2.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4396-HFF_MOI3_72hpi_1hPFA_1.HCMV-merlin.allC2025-09-30 02:35 92K 
[ ]merlin-tiles-profiles-L4397-HFF_MOI3_72hpi_1hPFA_2.HCMV-merlin.allC2025-09-30 02:35 93K 
[ ]merlin-tiles-profiles-L4398-HFF_MOI3_72hpi_48hPFA_1.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]merlin-tiles-profiles-L4399-HFF_MOI3_72hpi_48hPFA_2.HCMV-merlin.allC2025-09-30 02:35 95K 
[ ]sam_reads_in_genes-U001-1001_Input-STAR-2.5.3a.hg382025-09-29 21:34 90  
[ ]sam_reads_in_genes-U005-2551_Input-STAR-2.5.3a.hg382025-09-29 21:36 91  
[ ]sam_reads_in_genes-U011-1001_IP-STAR-2.5.3a.hg382025-09-29 21:32 92  
[ ]sam_reads_in_genes-U015-2551_IP-STAR-2.5.3a.hg382025-09-29 21:29 93  
[ ]z2025-10-04 04:08 3.2M 
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443