python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_0 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_0.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_1 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_1.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_10 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_10.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_11 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_11.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_12 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_12.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_13 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_13.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_14 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_14.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_15 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_15.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_16 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_16.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_17 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_17.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_18 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_18.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_19 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_19.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_2 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_2.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_20 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_20.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_21 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_21.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_22 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_22.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_23 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_23.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_24 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_24.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_25 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_25.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_26 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_26.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_27 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_27.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_28 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_28.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_29 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_29.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_3 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_3.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_30 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_30.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_31 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_31.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_32 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_32.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_33 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_33.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_34 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_34.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_35 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_35.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_36 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_36.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_37 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_37.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_38 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_38.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_39 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_39.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_4 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_4.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_40 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_40.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_41 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_41.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_42 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_42.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_43 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_43.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_44 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_44.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_45 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_45.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_46 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_46.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_5 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_5.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_6 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_6.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_7 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_7.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_8 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_8.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_9 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_9.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_0 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_0.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_1 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_1.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_10 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_10.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_11 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_11.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_12 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_12.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_13 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_13.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_14 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_14.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_15 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_15.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_16 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_16.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_17 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_17.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_18 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_18.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_19 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_19.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_2 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_2.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_20 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_20.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_21 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_21.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_22 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_22.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_23 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_23.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_24 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_24.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_25 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_25.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_26 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_26.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_27 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_27.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_28 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_28.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_29 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_29.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_3 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_3.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_30 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_30.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_31 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_31.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_32 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_32.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_33 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_33.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_34 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_34.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_35 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_35.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_36 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_36.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_37 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_37.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_38 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_38.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_39 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_39.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_4 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_4.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_40 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_40.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_41 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_41.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_42 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_42.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_43 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_43.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_44 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_44.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_45 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_45.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_46 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_46.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_5 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_5.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_6 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_6.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_7 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_7.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_8 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_8.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_9 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.counts.meme.ENCSR000EMT-hg38-outersection2.BW-RPM.min0.5.pattern_9.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_0 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_0.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_1 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_1.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_10 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_10.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_11 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_11.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_12 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_12.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_13 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_13.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_14 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_14.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_15 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_15.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_16 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_16.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_17 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_17.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_18 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_18.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_19 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_19.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_2 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_2.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_20 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_20.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_21 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_21.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_22 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_22.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_23 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_23.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_24 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_24.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_25 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_25.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_26 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_26.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_27 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_27.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_28 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_28.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_29 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_29.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_3 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_3.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_30 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_30.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_31 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_31.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_32 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_32.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_33 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_33.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_34 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_34.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_35 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_35.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_36 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_36.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_37 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_37.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_38 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_38.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_39 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_39.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_4 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_4.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_40 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_40.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_41 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_41.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_42 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_42.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_43 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_43.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_44 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_44.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_45 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_45.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_46 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_46.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_47 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_47.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_48 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_48.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_49 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_49.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_5 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_5.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_50 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_50.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_51 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_51.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_52 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_52.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_53 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_53.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_54 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_54.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_55 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_55.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_56 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_56.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_57 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_57.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_6 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_6.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_7 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_7.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_8 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_8.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_9 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.2.pattern_9.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_0 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_0.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_1 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_1.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_10 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_10.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_12 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_12.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_13 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_13.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_14 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_14.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_15 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_15.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_17 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_17.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_18 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_18.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_19 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_19.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_2 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_2.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_20 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_20.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_21 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_21.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_22 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_22.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_23 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_23.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_24 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_24.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_25 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_25.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_26 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_26.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_27 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_27.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_28 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_28.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_3 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_3.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_30 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_30.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_31 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_31.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_32 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_32.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_33 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_33.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_34 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_34.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_37 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_37.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_38 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_38.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_39 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_39.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_4 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_4.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_41 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_41.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_42 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_42.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_43 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_43.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_44 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_44.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_45 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_45.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_46 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_46.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_47 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_47.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_48 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_48.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_49 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_49.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_5 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_5.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_50 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_50.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_51 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_51.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_52 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_52.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_53 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_53.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_54 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_54.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_55 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_55.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_56 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_56.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_57 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_57.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_6 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_6.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_8 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_8.averageNMI -bed &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/AverageNMIfromBED.py hg38.DNase-ENCFF759OLD.2kbp.NMI.bgz DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_9 2 3 5 25 DNase-ENCFF759OLD.2kbp-vs-FIMO-tfmodisco.seq_contrib.profile.meme.ENCSR000EMT-hg38-intersection2.BW-RPM.min0.5.pattern_9.averageNMI -bed &