/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_0 -s 20241211_0331_MN41950_FAW44321_636c329e_0-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_10 -s 20241211_0331_MN41950_FAW44321_636c329e_10-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_11 -s 20241211_0331_MN41950_FAW44321_636c329e_11-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_12 -s 20241211_0331_MN41950_FAW44321_636c329e_12-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_13 -s 20241211_0331_MN41950_FAW44321_636c329e_13-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_14 -s 20241211_0331_MN41950_FAW44321_636c329e_14-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_15 -s 20241211_0331_MN41950_FAW44321_636c329e_15-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_16 -s 20241211_0331_MN41950_FAW44321_636c329e_16-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_17 -s 20241211_0331_MN41950_FAW44321_636c329e_17-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_18 -s 20241211_0331_MN41950_FAW44321_636c329e_18-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_19 -s 20241211_0331_MN41950_FAW44321_636c329e_19-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_1 -s 20241211_0331_MN41950_FAW44321_636c329e_1-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_20 -s 20241211_0331_MN41950_FAW44321_636c329e_20-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_21 -s 20241211_0331_MN41950_FAW44321_636c329e_21-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_22 -s 20241211_0331_MN41950_FAW44321_636c329e_22-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_23 -s 20241211_0331_MN41950_FAW44321_636c329e_23-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_24 -s 20241211_0331_MN41950_FAW44321_636c329e_24-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_25 -s 20241211_0331_MN41950_FAW44321_636c329e_25-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_26 -s 20241211_0331_MN41950_FAW44321_636c329e_26-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_27 -s 20241211_0331_MN41950_FAW44321_636c329e_27-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_28 -s 20241211_0331_MN41950_FAW44321_636c329e_28-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_29 -s 20241211_0331_MN41950_FAW44321_636c329e_29-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_2 -s 20241211_0331_MN41950_FAW44321_636c329e_2-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_30 -s 20241211_0331_MN41950_FAW44321_636c329e_30-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_31 -s 20241211_0331_MN41950_FAW44321_636c329e_31-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_32 -s 20241211_0331_MN41950_FAW44321_636c329e_32-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_33 -s 20241211_0331_MN41950_FAW44321_636c329e_33-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_34 -s 20241211_0331_MN41950_FAW44321_636c329e_34-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_35 -s 20241211_0331_MN41950_FAW44321_636c329e_35-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_36 -s 20241211_0331_MN41950_FAW44321_636c329e_36-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_37 -s 20241211_0331_MN41950_FAW44321_636c329e_37-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_38 -s 20241211_0331_MN41950_FAW44321_636c329e_38-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_39 -s 20241211_0331_MN41950_FAW44321_636c329e_39-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_3 -s 20241211_0331_MN41950_FAW44321_636c329e_3-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_40 -s 20241211_0331_MN41950_FAW44321_636c329e_40-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_41 -s 20241211_0331_MN41950_FAW44321_636c329e_41-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_42 -s 20241211_0331_MN41950_FAW44321_636c329e_42-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_43 -s 20241211_0331_MN41950_FAW44321_636c329e_43-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_44 -s 20241211_0331_MN41950_FAW44321_636c329e_44-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_45 -s 20241211_0331_MN41950_FAW44321_636c329e_45-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_46 -s 20241211_0331_MN41950_FAW44321_636c329e_46-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_47 -s 20241211_0331_MN41950_FAW44321_636c329e_47-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_48 -s 20241211_0331_MN41950_FAW44321_636c329e_48-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_49 -s 20241211_0331_MN41950_FAW44321_636c329e_49-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_4 -s 20241211_0331_MN41950_FAW44321_636c329e_4-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_50 -s 20241211_0331_MN41950_FAW44321_636c329e_50-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_51 -s 20241211_0331_MN41950_FAW44321_636c329e_51-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_52 -s 20241211_0331_MN41950_FAW44321_636c329e_52-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_5 -s 20241211_0331_MN41950_FAW44321_636c329e_5-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_6 -s 20241211_0331_MN41950_FAW44321_636c329e_6-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_7 -s 20241211_0331_MN41950_FAW44321_636c329e_7-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_8 -s 20241211_0331_MN41950_FAW44321_636c329e_8-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i 20241211_0331_MN41950_FAW44321_636c329e_9 -s 20241211_0331_MN41950_FAW44321_636c329e_9-guppy --flowcell FLO-MIN106 --kit SQK-LSK112 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter