python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH.bedGraph.gz K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38_CHH -bismark.cov &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2-profile-L3017-K562-CseDa01-XL-SMF-15min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2-profile-L3019-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2-profile-L3020-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ARID3A-human-ENCSR000EFY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ARNT-human-ENCSR613NUC-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF1-human-ENCSR091GVJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF3-human-ENCSR028UIU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF4-human-ENCSR145TSJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF6-human-ENCSR125RFR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ATF7-human-ENCSR972ZBV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BACH1-human-ENCSR740NPG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BCL6-human-ENCSR802AHH-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-BHLHE40-human-ENCSR000EGV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPB-human-ENCSR416QLJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPG-human-ENCSR490LWA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CEBPZ-human-ENCSR618GDK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CLOCK-human-ENCSR228OQM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB1-human-ENCSR471WXT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB3-human-ENCSR093FKD-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREB3L1-human-ENCSR109YGM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CREM-human-ENCSR077DKV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CTCFL-human-ENCSR000BNK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-CUX1-human-ENCSR178NTX-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F1-human-ENCSR720HUL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F3-human-ENCSR036QIR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F4-human-ENCSR000EWL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F5-human-ENCSR709DRM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F6-human-ENCSR000BLI-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F7-human-ENCSR171CAY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E2F8-human-ENCSR953DVM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-E4F1-human-ENCSR731LHZ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-EGR1-human-ENCSR000BNE-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF1-human-ENCSR000BMD-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF2-human-ENCSR594HXD-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELF4-human-ENCSR638QHV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ELK1-human-ENCSR000EFU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ERF-human-ENCSR459FUE-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ESRRA-human-ENCSR486IFJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ESRRB-human-ENCSR264LYE-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETS1-human-ENCSR000BKQ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETS2-human-ENCSR596IKD-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV1-human-ENCSR277DMR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV5-human-ENCSR971EWR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ETV6-human-ENCSR000FCE-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOS-human-ENCSR000FAI-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOSL1-human-ENCSR239ZLZ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOXA1-human-ENCSR819LHG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-FOXA3-human-ENCSR788DXU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GABPA-human-ENCSR290MUH-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GATA1-human-ENCSR000EFT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-GATA2-human-ENCSR000DKA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-HES1-human-ENCSR091JXL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-HEY1-human-ENCSR405KTQ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF1-human-ENCSR854MCV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF2-human-ENCSR376WCJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-IRF9-human-ENCSR926KTP-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUN-human-ENCSR000EFS-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUNB-human-ENCSR000DJY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-JUND-human-ENCSR000EGN-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF1-human-ENCSR550HCT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF13-human-ENCSR608HVP-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF16-human-ENCSR760UVO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-KLF6-human-ENCSR297CGF-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFF-human-ENCSR000EGI-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFG-human-ENCSR818DQV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAFK-human-ENCSR000EGX-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAX-human-ENCSR000BLP-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MAZ-human-ENCSR000EFX-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MEF2A-human-ENCSR000BNV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MEF2D-human-ENCSR647ZXA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-MYC-human-ENCSR000EGJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFE2-human-ENCSR552YGL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFE2L1-human-ENCSR632SHZ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFIX-human-ENCSR574VJG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFYA-human-ENCSR163VTS-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NFYB-human-ENCSR000EGQ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR1H2-human-ENCSR798MFW-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2C1-human-ENCSR178DEG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2C2-human-ENCSR750LYM-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2F1-human-ENCSR970NKQ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NR2F2-human-ENCSR000BRS-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-NRF1-human-ENCSR998AJK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-RFX1-human-ENCSR968GIB-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-RFX5-human-ENCSR000EGO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SIX5-human-ENCSR000BNW-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD1-human-ENCSR038DJJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD3-human-ENCSR376XAV-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SMAD4-human-ENCSR109SJT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SP1-human-ENCSR372IML-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SP2-human-ENCSR000BNL-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SPI1-human-ENCSR000BGW-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-SRF-human-ENCSR582IAO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT5A-human-ENCSR000BRR-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT5B-human-ENCSR663NFC-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-STAT6-human-ENCSR338UQU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TAL1-human-ENCSR000EHB-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TBP-human-ENCSR000EHA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF12-human-ENCSR744WOO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF3-human-ENCSR970OJY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TCF7-human-ENCSR863KUB-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TEAD1-human-ENCSR228ELU-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-TEAD4-human-ENCSR000BRK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-USF1-human-ENCSR000BKT-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-USF2-human-ENCSR359NFW-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-YY1-human-ENCSR000BMH-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBED1-human-ENCSR286PCG-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB33-human-ENCSR876GXA-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB49-human-ENCSR249VFB-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZBTB7A-human-ENCSR000BME-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZFX-human-ENCSR628DJK-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZHX1-human-ENCSR557RVF-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF143-human-ENCSR427WZJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF148-human-ENCSR018MSO-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF232-human-ENCSR360ECJ-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF263-human-ENCSR845GGY-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/signalAroundPeaks-nano.py K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2.gz 2 3 5 1000 1 L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report.txt.gz K562-ZNF274-human-ENCSR000EVX-vs-FIMO-intersection2-profile-L3021-K562-CseDa01-XL-SMF-180min-1uL.1x150mers-trimmed.bwameth.hg38.stranded.cytosine_report -cytosine_report &