/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_0/0 -s single_fast5-output-FAQ23700_af0b38d4_0-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_100/0 -s single_fast5-output-FAQ23700_af0b38d4_100-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_101/0 -s single_fast5-output-FAQ23700_af0b38d4_101-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_102/0 -s single_fast5-output-FAQ23700_af0b38d4_102-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_103/0 -s single_fast5-output-FAQ23700_af0b38d4_103-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_104/0 -s single_fast5-output-FAQ23700_af0b38d4_104-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_105/0 -s single_fast5-output-FAQ23700_af0b38d4_105-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_106/0 -s single_fast5-output-FAQ23700_af0b38d4_106-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_107/0 -s single_fast5-output-FAQ23700_af0b38d4_107-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_108/0 -s single_fast5-output-FAQ23700_af0b38d4_108-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_109/0 -s single_fast5-output-FAQ23700_af0b38d4_109-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_10/0 -s single_fast5-output-FAQ23700_af0b38d4_10-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_110/0 -s single_fast5-output-FAQ23700_af0b38d4_110-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_111/0 -s single_fast5-output-FAQ23700_af0b38d4_111-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_112/0 -s single_fast5-output-FAQ23700_af0b38d4_112-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_113/0 -s single_fast5-output-FAQ23700_af0b38d4_113-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_114/0 -s single_fast5-output-FAQ23700_af0b38d4_114-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_115/0 -s single_fast5-output-FAQ23700_af0b38d4_115-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_116/0 -s single_fast5-output-FAQ23700_af0b38d4_116-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_117/0 -s single_fast5-output-FAQ23700_af0b38d4_117-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_118/0 -s single_fast5-output-FAQ23700_af0b38d4_118-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_119/0 -s single_fast5-output-FAQ23700_af0b38d4_119-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_11/0 -s single_fast5-output-FAQ23700_af0b38d4_11-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_120/0 -s single_fast5-output-FAQ23700_af0b38d4_120-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_121/0 -s single_fast5-output-FAQ23700_af0b38d4_121-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_122/0 -s single_fast5-output-FAQ23700_af0b38d4_122-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_123/0 -s single_fast5-output-FAQ23700_af0b38d4_123-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_124/0 -s single_fast5-output-FAQ23700_af0b38d4_124-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_125/0 -s single_fast5-output-FAQ23700_af0b38d4_125-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_126/0 -s single_fast5-output-FAQ23700_af0b38d4_126-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_127/0 -s single_fast5-output-FAQ23700_af0b38d4_127-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_128/0 -s single_fast5-output-FAQ23700_af0b38d4_128-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_129/0 -s single_fast5-output-FAQ23700_af0b38d4_129-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_12/0 -s single_fast5-output-FAQ23700_af0b38d4_12-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_130/0 -s single_fast5-output-FAQ23700_af0b38d4_130-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_131/0 -s single_fast5-output-FAQ23700_af0b38d4_131-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_132/0 -s single_fast5-output-FAQ23700_af0b38d4_132-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_133/0 -s single_fast5-output-FAQ23700_af0b38d4_133-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_134/0 -s single_fast5-output-FAQ23700_af0b38d4_134-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_135/0 -s single_fast5-output-FAQ23700_af0b38d4_135-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_136/0 -s single_fast5-output-FAQ23700_af0b38d4_136-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_137/0 -s single_fast5-output-FAQ23700_af0b38d4_137-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_138/0 -s single_fast5-output-FAQ23700_af0b38d4_138-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_139/0 -s single_fast5-output-FAQ23700_af0b38d4_139-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_13/0 -s single_fast5-output-FAQ23700_af0b38d4_13-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_140/0 -s single_fast5-output-FAQ23700_af0b38d4_140-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_141/0 -s single_fast5-output-FAQ23700_af0b38d4_141-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_142/0 -s single_fast5-output-FAQ23700_af0b38d4_142-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_143/0 -s single_fast5-output-FAQ23700_af0b38d4_143-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_144/0 -s single_fast5-output-FAQ23700_af0b38d4_144-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_145/0 -s single_fast5-output-FAQ23700_af0b38d4_145-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_146/0 -s single_fast5-output-FAQ23700_af0b38d4_146-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_147/0 -s single_fast5-output-FAQ23700_af0b38d4_147-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_148/0 -s single_fast5-output-FAQ23700_af0b38d4_148-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_149/0 -s single_fast5-output-FAQ23700_af0b38d4_149-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_14/0 -s single_fast5-output-FAQ23700_af0b38d4_14-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_150/0 -s single_fast5-output-FAQ23700_af0b38d4_150-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_151/0 -s single_fast5-output-FAQ23700_af0b38d4_151-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_152/0 -s single_fast5-output-FAQ23700_af0b38d4_152-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_153/0 -s single_fast5-output-FAQ23700_af0b38d4_153-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_154/0 -s single_fast5-output-FAQ23700_af0b38d4_154-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_155/0 -s single_fast5-output-FAQ23700_af0b38d4_155-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_156/0 -s single_fast5-output-FAQ23700_af0b38d4_156-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_157/0 -s single_fast5-output-FAQ23700_af0b38d4_157-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_158/0 -s single_fast5-output-FAQ23700_af0b38d4_158-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_159/0 -s single_fast5-output-FAQ23700_af0b38d4_159-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_15/0 -s single_fast5-output-FAQ23700_af0b38d4_15-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_160/0 -s single_fast5-output-FAQ23700_af0b38d4_160-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_161/0 -s single_fast5-output-FAQ23700_af0b38d4_161-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_162/0 -s single_fast5-output-FAQ23700_af0b38d4_162-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_163/0 -s single_fast5-output-FAQ23700_af0b38d4_163-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_164/0 -s single_fast5-output-FAQ23700_af0b38d4_164-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_165/0 -s single_fast5-output-FAQ23700_af0b38d4_165-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_166/0 -s single_fast5-output-FAQ23700_af0b38d4_166-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_167/0 -s single_fast5-output-FAQ23700_af0b38d4_167-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_168/0 -s single_fast5-output-FAQ23700_af0b38d4_168-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_169/0 -s single_fast5-output-FAQ23700_af0b38d4_169-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_16/0 -s single_fast5-output-FAQ23700_af0b38d4_16-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_170/0 -s single_fast5-output-FAQ23700_af0b38d4_170-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_171/0 -s single_fast5-output-FAQ23700_af0b38d4_171-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_172/0 -s single_fast5-output-FAQ23700_af0b38d4_172-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_173/0 -s single_fast5-output-FAQ23700_af0b38d4_173-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_174/0 -s single_fast5-output-FAQ23700_af0b38d4_174-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_175/0 -s single_fast5-output-FAQ23700_af0b38d4_175-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_176/0 -s single_fast5-output-FAQ23700_af0b38d4_176-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_177/0 -s single_fast5-output-FAQ23700_af0b38d4_177-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_178/0 -s single_fast5-output-FAQ23700_af0b38d4_178-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_179/0 -s single_fast5-output-FAQ23700_af0b38d4_179-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_17/0 -s single_fast5-output-FAQ23700_af0b38d4_17-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_180/0 -s single_fast5-output-FAQ23700_af0b38d4_180-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_181/0 -s single_fast5-output-FAQ23700_af0b38d4_181-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_182/0 -s single_fast5-output-FAQ23700_af0b38d4_182-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_183/0 -s single_fast5-output-FAQ23700_af0b38d4_183-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_184/0 -s single_fast5-output-FAQ23700_af0b38d4_184-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_185/0 -s single_fast5-output-FAQ23700_af0b38d4_185-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_186/0 -s single_fast5-output-FAQ23700_af0b38d4_186-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_187/0 -s single_fast5-output-FAQ23700_af0b38d4_187-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_188/0 -s single_fast5-output-FAQ23700_af0b38d4_188-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_189/0 -s single_fast5-output-FAQ23700_af0b38d4_189-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_18/0 -s single_fast5-output-FAQ23700_af0b38d4_18-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_190/0 -s single_fast5-output-FAQ23700_af0b38d4_190-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_191/0 -s single_fast5-output-FAQ23700_af0b38d4_191-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_192/0 -s single_fast5-output-FAQ23700_af0b38d4_192-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_193/0 -s single_fast5-output-FAQ23700_af0b38d4_193-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_194/0 -s single_fast5-output-FAQ23700_af0b38d4_194-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_195/0 -s single_fast5-output-FAQ23700_af0b38d4_195-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_196/0 -s single_fast5-output-FAQ23700_af0b38d4_196-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_197/0 -s single_fast5-output-FAQ23700_af0b38d4_197-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_198/0 -s single_fast5-output-FAQ23700_af0b38d4_198-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_199/0 -s single_fast5-output-FAQ23700_af0b38d4_199-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_19/0 -s single_fast5-output-FAQ23700_af0b38d4_19-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_1/0 -s single_fast5-output-FAQ23700_af0b38d4_1-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_200/0 -s single_fast5-output-FAQ23700_af0b38d4_200-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_201/0 -s single_fast5-output-FAQ23700_af0b38d4_201-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_202/0 -s single_fast5-output-FAQ23700_af0b38d4_202-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_203/0 -s single_fast5-output-FAQ23700_af0b38d4_203-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_204/0 -s single_fast5-output-FAQ23700_af0b38d4_204-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_205/0 -s single_fast5-output-FAQ23700_af0b38d4_205-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_206/0 -s single_fast5-output-FAQ23700_af0b38d4_206-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_207/0 -s single_fast5-output-FAQ23700_af0b38d4_207-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_208/0 -s single_fast5-output-FAQ23700_af0b38d4_208-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_209/0 -s single_fast5-output-FAQ23700_af0b38d4_209-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_20/0 -s single_fast5-output-FAQ23700_af0b38d4_20-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_210/0 -s single_fast5-output-FAQ23700_af0b38d4_210-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_211/0 -s single_fast5-output-FAQ23700_af0b38d4_211-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_212/0 -s single_fast5-output-FAQ23700_af0b38d4_212-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_213/0 -s single_fast5-output-FAQ23700_af0b38d4_213-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_214/0 -s single_fast5-output-FAQ23700_af0b38d4_214-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_215/0 -s single_fast5-output-FAQ23700_af0b38d4_215-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_216/0 -s single_fast5-output-FAQ23700_af0b38d4_216-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_217/0 -s single_fast5-output-FAQ23700_af0b38d4_217-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_218/0 -s single_fast5-output-FAQ23700_af0b38d4_218-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_219/0 -s single_fast5-output-FAQ23700_af0b38d4_219-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_21/0 -s single_fast5-output-FAQ23700_af0b38d4_21-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_220/0 -s single_fast5-output-FAQ23700_af0b38d4_220-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_221/0 -s single_fast5-output-FAQ23700_af0b38d4_221-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_222/0 -s single_fast5-output-FAQ23700_af0b38d4_222-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_223/0 -s single_fast5-output-FAQ23700_af0b38d4_223-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_224/0 -s single_fast5-output-FAQ23700_af0b38d4_224-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_225/0 -s single_fast5-output-FAQ23700_af0b38d4_225-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_226/0 -s single_fast5-output-FAQ23700_af0b38d4_226-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_227/0 -s single_fast5-output-FAQ23700_af0b38d4_227-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_228/0 -s single_fast5-output-FAQ23700_af0b38d4_228-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_229/0 -s single_fast5-output-FAQ23700_af0b38d4_229-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_22/0 -s single_fast5-output-FAQ23700_af0b38d4_22-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_230/0 -s single_fast5-output-FAQ23700_af0b38d4_230-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_231/0 -s single_fast5-output-FAQ23700_af0b38d4_231-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_232/0 -s single_fast5-output-FAQ23700_af0b38d4_232-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_233/0 -s single_fast5-output-FAQ23700_af0b38d4_233-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_234/0 -s single_fast5-output-FAQ23700_af0b38d4_234-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_235/0 -s single_fast5-output-FAQ23700_af0b38d4_235-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_236/0 -s single_fast5-output-FAQ23700_af0b38d4_236-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_237/0 -s single_fast5-output-FAQ23700_af0b38d4_237-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_238/0 -s single_fast5-output-FAQ23700_af0b38d4_238-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_239/0 -s single_fast5-output-FAQ23700_af0b38d4_239-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_23/0 -s single_fast5-output-FAQ23700_af0b38d4_23-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_240/0 -s single_fast5-output-FAQ23700_af0b38d4_240-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_241/0 -s single_fast5-output-FAQ23700_af0b38d4_241-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_242/0 -s single_fast5-output-FAQ23700_af0b38d4_242-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_243/0 -s single_fast5-output-FAQ23700_af0b38d4_243-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_244/0 -s single_fast5-output-FAQ23700_af0b38d4_244-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_245/0 -s single_fast5-output-FAQ23700_af0b38d4_245-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_246/0 -s single_fast5-output-FAQ23700_af0b38d4_246-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_247/0 -s single_fast5-output-FAQ23700_af0b38d4_247-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_248/0 -s single_fast5-output-FAQ23700_af0b38d4_248-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_249/0 -s single_fast5-output-FAQ23700_af0b38d4_249-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_24/0 -s single_fast5-output-FAQ23700_af0b38d4_24-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_250/0 -s single_fast5-output-FAQ23700_af0b38d4_250-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_251/0 -s single_fast5-output-FAQ23700_af0b38d4_251-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_252/0 -s single_fast5-output-FAQ23700_af0b38d4_252-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_253/0 -s single_fast5-output-FAQ23700_af0b38d4_253-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_254/0 -s single_fast5-output-FAQ23700_af0b38d4_254-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_255/0 -s single_fast5-output-FAQ23700_af0b38d4_255-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_256/0 -s single_fast5-output-FAQ23700_af0b38d4_256-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_257/0 -s single_fast5-output-FAQ23700_af0b38d4_257-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_258/0 -s single_fast5-output-FAQ23700_af0b38d4_258-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_259/0 -s single_fast5-output-FAQ23700_af0b38d4_259-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_25/0 -s single_fast5-output-FAQ23700_af0b38d4_25-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_260/0 -s single_fast5-output-FAQ23700_af0b38d4_260-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_261/0 -s single_fast5-output-FAQ23700_af0b38d4_261-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_262/0 -s single_fast5-output-FAQ23700_af0b38d4_262-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_263/0 -s single_fast5-output-FAQ23700_af0b38d4_263-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_264/0 -s single_fast5-output-FAQ23700_af0b38d4_264-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_265/0 -s single_fast5-output-FAQ23700_af0b38d4_265-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_266/0 -s single_fast5-output-FAQ23700_af0b38d4_266-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_267/0 -s single_fast5-output-FAQ23700_af0b38d4_267-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_268/0 -s single_fast5-output-FAQ23700_af0b38d4_268-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_269/0 -s single_fast5-output-FAQ23700_af0b38d4_269-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_26/0 -s single_fast5-output-FAQ23700_af0b38d4_26-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_270/0 -s single_fast5-output-FAQ23700_af0b38d4_270-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_271/0 -s single_fast5-output-FAQ23700_af0b38d4_271-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_272/0 -s single_fast5-output-FAQ23700_af0b38d4_272-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_273/0 -s single_fast5-output-FAQ23700_af0b38d4_273-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_274/0 -s single_fast5-output-FAQ23700_af0b38d4_274-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_275/0 -s single_fast5-output-FAQ23700_af0b38d4_275-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_276/0 -s single_fast5-output-FAQ23700_af0b38d4_276-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_277/0 -s single_fast5-output-FAQ23700_af0b38d4_277-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_278/0 -s single_fast5-output-FAQ23700_af0b38d4_278-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_279/0 -s single_fast5-output-FAQ23700_af0b38d4_279-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_27/0 -s single_fast5-output-FAQ23700_af0b38d4_27-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_280/0 -s single_fast5-output-FAQ23700_af0b38d4_280-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_281/0 -s single_fast5-output-FAQ23700_af0b38d4_281-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_282/0 -s single_fast5-output-FAQ23700_af0b38d4_282-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_283/0 -s single_fast5-output-FAQ23700_af0b38d4_283-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_284/0 -s single_fast5-output-FAQ23700_af0b38d4_284-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_285/0 -s single_fast5-output-FAQ23700_af0b38d4_285-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_286/0 -s single_fast5-output-FAQ23700_af0b38d4_286-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_287/0 -s single_fast5-output-FAQ23700_af0b38d4_287-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_288/0 -s single_fast5-output-FAQ23700_af0b38d4_288-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_289/0 -s single_fast5-output-FAQ23700_af0b38d4_289-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_28/0 -s single_fast5-output-FAQ23700_af0b38d4_28-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_290/0 -s single_fast5-output-FAQ23700_af0b38d4_290-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_291/0 -s single_fast5-output-FAQ23700_af0b38d4_291-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_292/0 -s single_fast5-output-FAQ23700_af0b38d4_292-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_293/0 -s single_fast5-output-FAQ23700_af0b38d4_293-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_294/0 -s single_fast5-output-FAQ23700_af0b38d4_294-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_295/0 -s single_fast5-output-FAQ23700_af0b38d4_295-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_296/0 -s single_fast5-output-FAQ23700_af0b38d4_296-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_297/0 -s single_fast5-output-FAQ23700_af0b38d4_297-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_298/0 -s single_fast5-output-FAQ23700_af0b38d4_298-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_299/0 -s single_fast5-output-FAQ23700_af0b38d4_299-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_29/0 -s single_fast5-output-FAQ23700_af0b38d4_29-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_2/0 -s single_fast5-output-FAQ23700_af0b38d4_2-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_300/0 -s single_fast5-output-FAQ23700_af0b38d4_300-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_301/0 -s single_fast5-output-FAQ23700_af0b38d4_301-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_302/0 -s single_fast5-output-FAQ23700_af0b38d4_302-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_303/0 -s single_fast5-output-FAQ23700_af0b38d4_303-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_304/0 -s single_fast5-output-FAQ23700_af0b38d4_304-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_305/0 -s single_fast5-output-FAQ23700_af0b38d4_305-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_306/0 -s single_fast5-output-FAQ23700_af0b38d4_306-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_307/0 -s single_fast5-output-FAQ23700_af0b38d4_307-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_308/0 -s single_fast5-output-FAQ23700_af0b38d4_308-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_309/0 -s single_fast5-output-FAQ23700_af0b38d4_309-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_30/0 -s single_fast5-output-FAQ23700_af0b38d4_30-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_310/0 -s single_fast5-output-FAQ23700_af0b38d4_310-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_311/0 -s single_fast5-output-FAQ23700_af0b38d4_311-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_312/0 -s single_fast5-output-FAQ23700_af0b38d4_312-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_313/0 -s single_fast5-output-FAQ23700_af0b38d4_313-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_314/0 -s single_fast5-output-FAQ23700_af0b38d4_314-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_315/0 -s single_fast5-output-FAQ23700_af0b38d4_315-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_316/0 -s single_fast5-output-FAQ23700_af0b38d4_316-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_317/0 -s single_fast5-output-FAQ23700_af0b38d4_317-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_318/0 -s single_fast5-output-FAQ23700_af0b38d4_318-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_319/0 -s single_fast5-output-FAQ23700_af0b38d4_319-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_31/0 -s single_fast5-output-FAQ23700_af0b38d4_31-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_320/0 -s single_fast5-output-FAQ23700_af0b38d4_320-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_321/0 -s single_fast5-output-FAQ23700_af0b38d4_321-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_322/0 -s single_fast5-output-FAQ23700_af0b38d4_322-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_323/0 -s single_fast5-output-FAQ23700_af0b38d4_323-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_324/0 -s single_fast5-output-FAQ23700_af0b38d4_324-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_325/0 -s single_fast5-output-FAQ23700_af0b38d4_325-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_326/0 -s single_fast5-output-FAQ23700_af0b38d4_326-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_327/0 -s single_fast5-output-FAQ23700_af0b38d4_327-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_328/0 -s single_fast5-output-FAQ23700_af0b38d4_328-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_329/0 -s single_fast5-output-FAQ23700_af0b38d4_329-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_32/0 -s single_fast5-output-FAQ23700_af0b38d4_32-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_330/0 -s single_fast5-output-FAQ23700_af0b38d4_330-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_331/0 -s single_fast5-output-FAQ23700_af0b38d4_331-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_332/0 -s single_fast5-output-FAQ23700_af0b38d4_332-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_333/0 -s single_fast5-output-FAQ23700_af0b38d4_333-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_334/0 -s single_fast5-output-FAQ23700_af0b38d4_334-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_335/0 -s single_fast5-output-FAQ23700_af0b38d4_335-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_336/0 -s single_fast5-output-FAQ23700_af0b38d4_336-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_337/0 -s single_fast5-output-FAQ23700_af0b38d4_337-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_338/0 -s single_fast5-output-FAQ23700_af0b38d4_338-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_339/0 -s single_fast5-output-FAQ23700_af0b38d4_339-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_33/0 -s single_fast5-output-FAQ23700_af0b38d4_33-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_340/0 -s single_fast5-output-FAQ23700_af0b38d4_340-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_341/0 -s single_fast5-output-FAQ23700_af0b38d4_341-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_342/0 -s single_fast5-output-FAQ23700_af0b38d4_342-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_343/0 -s single_fast5-output-FAQ23700_af0b38d4_343-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_344/0 -s single_fast5-output-FAQ23700_af0b38d4_344-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_345/0 -s single_fast5-output-FAQ23700_af0b38d4_345-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_346/0 -s single_fast5-output-FAQ23700_af0b38d4_346-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_347/0 -s single_fast5-output-FAQ23700_af0b38d4_347-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_348/0 -s single_fast5-output-FAQ23700_af0b38d4_348-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_349/0 -s single_fast5-output-FAQ23700_af0b38d4_349-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_34/0 -s single_fast5-output-FAQ23700_af0b38d4_34-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_350/0 -s single_fast5-output-FAQ23700_af0b38d4_350-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_351/0 -s single_fast5-output-FAQ23700_af0b38d4_351-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_352/0 -s single_fast5-output-FAQ23700_af0b38d4_352-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_353/0 -s single_fast5-output-FAQ23700_af0b38d4_353-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_354/0 -s single_fast5-output-FAQ23700_af0b38d4_354-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_355/0 -s single_fast5-output-FAQ23700_af0b38d4_355-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_356/0 -s single_fast5-output-FAQ23700_af0b38d4_356-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_357/0 -s single_fast5-output-FAQ23700_af0b38d4_357-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_358/0 -s single_fast5-output-FAQ23700_af0b38d4_358-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_359/0 -s single_fast5-output-FAQ23700_af0b38d4_359-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_35/0 -s single_fast5-output-FAQ23700_af0b38d4_35-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_360/0 -s single_fast5-output-FAQ23700_af0b38d4_360-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_361/0 -s single_fast5-output-FAQ23700_af0b38d4_361-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_362/0 -s single_fast5-output-FAQ23700_af0b38d4_362-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_363/0 -s single_fast5-output-FAQ23700_af0b38d4_363-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_364/0 -s single_fast5-output-FAQ23700_af0b38d4_364-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_365/0 -s single_fast5-output-FAQ23700_af0b38d4_365-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_366/0 -s single_fast5-output-FAQ23700_af0b38d4_366-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_367/0 -s single_fast5-output-FAQ23700_af0b38d4_367-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_368/0 -s single_fast5-output-FAQ23700_af0b38d4_368-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_369/0 -s single_fast5-output-FAQ23700_af0b38d4_369-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_36/0 -s single_fast5-output-FAQ23700_af0b38d4_36-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_370/0 -s single_fast5-output-FAQ23700_af0b38d4_370-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_371/0 -s single_fast5-output-FAQ23700_af0b38d4_371-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_372/0 -s single_fast5-output-FAQ23700_af0b38d4_372-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_373/0 -s single_fast5-output-FAQ23700_af0b38d4_373-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_374/0 -s single_fast5-output-FAQ23700_af0b38d4_374-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_375/0 -s single_fast5-output-FAQ23700_af0b38d4_375-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_376/0 -s single_fast5-output-FAQ23700_af0b38d4_376-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_377/0 -s single_fast5-output-FAQ23700_af0b38d4_377-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_378/0 -s single_fast5-output-FAQ23700_af0b38d4_378-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_379/0 -s single_fast5-output-FAQ23700_af0b38d4_379-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_37/0 -s single_fast5-output-FAQ23700_af0b38d4_37-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_380/0 -s single_fast5-output-FAQ23700_af0b38d4_380-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_381/0 -s single_fast5-output-FAQ23700_af0b38d4_381-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_382/0 -s single_fast5-output-FAQ23700_af0b38d4_382-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_383/0 -s single_fast5-output-FAQ23700_af0b38d4_383-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_384/0 -s single_fast5-output-FAQ23700_af0b38d4_384-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_385/0 -s single_fast5-output-FAQ23700_af0b38d4_385-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_386/0 -s single_fast5-output-FAQ23700_af0b38d4_386-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_387/0 -s single_fast5-output-FAQ23700_af0b38d4_387-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_388/0 -s single_fast5-output-FAQ23700_af0b38d4_388-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_389/0 -s single_fast5-output-FAQ23700_af0b38d4_389-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_38/0 -s single_fast5-output-FAQ23700_af0b38d4_38-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_390/0 -s single_fast5-output-FAQ23700_af0b38d4_390-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_391/0 -s single_fast5-output-FAQ23700_af0b38d4_391-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_392/0 -s single_fast5-output-FAQ23700_af0b38d4_392-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_393/0 -s single_fast5-output-FAQ23700_af0b38d4_393-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_394/0 -s single_fast5-output-FAQ23700_af0b38d4_394-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_395/0 -s single_fast5-output-FAQ23700_af0b38d4_395-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_396/0 -s single_fast5-output-FAQ23700_af0b38d4_396-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_397/0 -s single_fast5-output-FAQ23700_af0b38d4_397-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_398/0 -s single_fast5-output-FAQ23700_af0b38d4_398-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_399/0 -s single_fast5-output-FAQ23700_af0b38d4_399-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_39/0 -s single_fast5-output-FAQ23700_af0b38d4_39-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_3/0 -s single_fast5-output-FAQ23700_af0b38d4_3-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_400/0 -s single_fast5-output-FAQ23700_af0b38d4_400-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_401/0 -s single_fast5-output-FAQ23700_af0b38d4_401-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_402/0 -s single_fast5-output-FAQ23700_af0b38d4_402-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_403/0 -s single_fast5-output-FAQ23700_af0b38d4_403-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_404/0 -s single_fast5-output-FAQ23700_af0b38d4_404-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_405/0 -s single_fast5-output-FAQ23700_af0b38d4_405-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_406/0 -s single_fast5-output-FAQ23700_af0b38d4_406-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_407/0 -s single_fast5-output-FAQ23700_af0b38d4_407-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_408/0 -s single_fast5-output-FAQ23700_af0b38d4_408-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_409/0 -s single_fast5-output-FAQ23700_af0b38d4_409-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_40/0 -s single_fast5-output-FAQ23700_af0b38d4_40-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_410/0 -s single_fast5-output-FAQ23700_af0b38d4_410-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_411/0 -s single_fast5-output-FAQ23700_af0b38d4_411-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_412/0 -s single_fast5-output-FAQ23700_af0b38d4_412-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_413/0 -s single_fast5-output-FAQ23700_af0b38d4_413-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_414/0 -s single_fast5-output-FAQ23700_af0b38d4_414-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_415/0 -s single_fast5-output-FAQ23700_af0b38d4_415-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_416/0 -s single_fast5-output-FAQ23700_af0b38d4_416-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_417/0 -s single_fast5-output-FAQ23700_af0b38d4_417-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_418/0 -s single_fast5-output-FAQ23700_af0b38d4_418-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_419/0 -s single_fast5-output-FAQ23700_af0b38d4_419-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_41/0 -s single_fast5-output-FAQ23700_af0b38d4_41-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_420/0 -s single_fast5-output-FAQ23700_af0b38d4_420-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_421/0 -s single_fast5-output-FAQ23700_af0b38d4_421-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_422/0 -s single_fast5-output-FAQ23700_af0b38d4_422-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_423/0 -s single_fast5-output-FAQ23700_af0b38d4_423-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_424/0 -s single_fast5-output-FAQ23700_af0b38d4_424-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_425/0 -s single_fast5-output-FAQ23700_af0b38d4_425-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_426/0 -s single_fast5-output-FAQ23700_af0b38d4_426-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_427/0 -s single_fast5-output-FAQ23700_af0b38d4_427-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_428/0 -s single_fast5-output-FAQ23700_af0b38d4_428-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_429/0 -s single_fast5-output-FAQ23700_af0b38d4_429-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_42/0 -s single_fast5-output-FAQ23700_af0b38d4_42-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_430/0 -s single_fast5-output-FAQ23700_af0b38d4_430-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_431/0 -s single_fast5-output-FAQ23700_af0b38d4_431-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_432/0 -s single_fast5-output-FAQ23700_af0b38d4_432-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_433/0 -s single_fast5-output-FAQ23700_af0b38d4_433-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_434/0 -s single_fast5-output-FAQ23700_af0b38d4_434-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_435/0 -s single_fast5-output-FAQ23700_af0b38d4_435-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_436/0 -s single_fast5-output-FAQ23700_af0b38d4_436-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_437/0 -s single_fast5-output-FAQ23700_af0b38d4_437-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_438/0 -s single_fast5-output-FAQ23700_af0b38d4_438-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_439/0 -s single_fast5-output-FAQ23700_af0b38d4_439-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_43/0 -s single_fast5-output-FAQ23700_af0b38d4_43-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_440/0 -s single_fast5-output-FAQ23700_af0b38d4_440-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_441/0 -s single_fast5-output-FAQ23700_af0b38d4_441-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_442/0 -s single_fast5-output-FAQ23700_af0b38d4_442-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_44/0 -s single_fast5-output-FAQ23700_af0b38d4_44-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_45/0 -s single_fast5-output-FAQ23700_af0b38d4_45-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_46/0 -s single_fast5-output-FAQ23700_af0b38d4_46-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_47/0 -s single_fast5-output-FAQ23700_af0b38d4_47-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_48/0 -s single_fast5-output-FAQ23700_af0b38d4_48-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_49/0 -s single_fast5-output-FAQ23700_af0b38d4_49-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_4/0 -s single_fast5-output-FAQ23700_af0b38d4_4-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_50/0 -s single_fast5-output-FAQ23700_af0b38d4_50-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_51/0 -s single_fast5-output-FAQ23700_af0b38d4_51-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_52/0 -s single_fast5-output-FAQ23700_af0b38d4_52-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_53/0 -s single_fast5-output-FAQ23700_af0b38d4_53-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_54/0 -s single_fast5-output-FAQ23700_af0b38d4_54-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_55/0 -s single_fast5-output-FAQ23700_af0b38d4_55-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_56/0 -s single_fast5-output-FAQ23700_af0b38d4_56-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_57/0 -s single_fast5-output-FAQ23700_af0b38d4_57-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_58/0 -s single_fast5-output-FAQ23700_af0b38d4_58-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_59/0 -s single_fast5-output-FAQ23700_af0b38d4_59-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_5/0 -s single_fast5-output-FAQ23700_af0b38d4_5-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_60/0 -s single_fast5-output-FAQ23700_af0b38d4_60-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_61/0 -s single_fast5-output-FAQ23700_af0b38d4_61-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_62/0 -s single_fast5-output-FAQ23700_af0b38d4_62-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_63/0 -s single_fast5-output-FAQ23700_af0b38d4_63-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_64/0 -s single_fast5-output-FAQ23700_af0b38d4_64-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_65/0 -s single_fast5-output-FAQ23700_af0b38d4_65-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_66/0 -s single_fast5-output-FAQ23700_af0b38d4_66-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_67/0 -s single_fast5-output-FAQ23700_af0b38d4_67-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_68/0 -s single_fast5-output-FAQ23700_af0b38d4_68-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_69/0 -s single_fast5-output-FAQ23700_af0b38d4_69-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_6/0 -s single_fast5-output-FAQ23700_af0b38d4_6-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_70/0 -s single_fast5-output-FAQ23700_af0b38d4_70-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_71/0 -s single_fast5-output-FAQ23700_af0b38d4_71-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_72/0 -s single_fast5-output-FAQ23700_af0b38d4_72-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_73/0 -s single_fast5-output-FAQ23700_af0b38d4_73-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_74/0 -s single_fast5-output-FAQ23700_af0b38d4_74-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_75/0 -s single_fast5-output-FAQ23700_af0b38d4_75-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_76/0 -s single_fast5-output-FAQ23700_af0b38d4_76-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_77/0 -s single_fast5-output-FAQ23700_af0b38d4_77-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_78/0 -s single_fast5-output-FAQ23700_af0b38d4_78-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_79/0 -s single_fast5-output-FAQ23700_af0b38d4_79-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_7/0 -s single_fast5-output-FAQ23700_af0b38d4_7-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_80/0 -s single_fast5-output-FAQ23700_af0b38d4_80-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_81/0 -s single_fast5-output-FAQ23700_af0b38d4_81-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_82/0 -s single_fast5-output-FAQ23700_af0b38d4_82-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_83/0 -s single_fast5-output-FAQ23700_af0b38d4_83-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_84/0 -s single_fast5-output-FAQ23700_af0b38d4_84-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_85/0 -s single_fast5-output-FAQ23700_af0b38d4_85-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_86/0 -s single_fast5-output-FAQ23700_af0b38d4_86-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_87/0 -s single_fast5-output-FAQ23700_af0b38d4_87-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_88/0 -s single_fast5-output-FAQ23700_af0b38d4_88-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_89/0 -s single_fast5-output-FAQ23700_af0b38d4_89-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_8/0 -s single_fast5-output-FAQ23700_af0b38d4_8-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_90/0 -s single_fast5-output-FAQ23700_af0b38d4_90-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_91/0 -s single_fast5-output-FAQ23700_af0b38d4_91-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_92/0 -s single_fast5-output-FAQ23700_af0b38d4_92-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_93/0 -s single_fast5-output-FAQ23700_af0b38d4_93-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_94/0 -s single_fast5-output-FAQ23700_af0b38d4_94-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter /oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAQ23700_af0b38d4_9/0 -s single_fast5-output-FAQ23700_af0b38d4_9-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter