tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_0/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_0-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_0
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_100/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_100-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_100
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_101/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_101-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_101
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_102/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_102-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_102
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_103/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_103-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_103
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_104/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_104-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_104
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_105/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_105-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_105
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_106/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_106-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_106
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_107/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_107-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_107
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_108/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_108-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_108
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_109/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_109-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_109
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_10/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_10-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_10
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_110/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_110-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_110
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_111/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_111-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_111
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_112/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_112-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_112
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_113/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_113-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_113
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_114/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_114-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_114
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_115/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_115-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_115
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_116/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_116-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_116
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_117/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_117-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_117
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_118/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_118-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_118
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_119/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_119-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_119
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_11/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_11-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_11
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_120/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_120-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_120
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_121/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_121-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_121
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_122/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_122-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_122
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_123/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_123-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_123
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_124/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_124-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_124
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_125/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_125-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_125
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_126/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_126-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_126
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_127/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_127-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_127
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_128/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_128-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_128
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_129/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_129-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_129
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_12/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_12-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_12
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_130/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_130-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_130
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_131/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_131-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_131
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_132/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_132-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_132
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_133/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_133-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_133
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_134/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_134-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_134
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_135/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_135-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_135
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_136/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_136-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_136
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_137/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_137-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_137
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_138/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_138-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_138
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_139/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_139-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_139
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_13/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_13-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_13
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_140/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_140-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_140
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_141/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_141-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_141
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_142/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_142-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_142
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_143/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_143-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_143
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_144/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_144-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_144
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_145/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_145-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_145
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_146/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_146-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_146
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_147/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_147-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_147
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_148/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_148-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_148
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_149/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_149-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_149
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_14/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_14-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_14
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_150/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_150-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_150
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_151/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_151-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_151
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_152/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_152-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_152
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_153/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_153-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_153
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_154/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_154-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_154
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_155/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_155-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_155
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_156/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_156-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_156
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_157/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_157-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_157
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_158/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_158-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_158
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_159/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_159-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_159
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_15/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_15-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_15
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_160/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_160-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_160
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_161/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_161-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_161
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_162/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_162-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_162
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_163/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_163-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_163
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_164/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_164-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_164
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_165/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_165-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_165
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_166/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_166-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_166
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_167/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_167-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_167
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_168/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_168-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_168
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_169/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_169-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_169
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_16/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_16-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_16
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_170/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_170-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_170
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_171/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_171-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_171
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_172/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_172-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_172
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_173/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_173-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_173
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_174/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_174-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_174
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_175/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_175-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_175
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_176/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_176-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_176
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_177/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_177-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_177
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_178/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_178-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_178
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_179/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_179-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_179
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_17/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_17-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_17
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_180/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_180-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_180
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_181/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_181-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_181
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_182/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_182-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_182
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_183/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_183-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_183
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_184/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_184-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_184
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_185/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_185-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_185
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_186/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_186-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_186
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_187/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_187-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_187
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_188/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_188-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_188
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_189/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_189-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_189
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_18/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_18-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_18
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_190/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_190-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_190
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_191/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_191-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_191
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_192/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_192-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_192
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_193/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_193-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_193
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_194/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_194-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_194
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_195/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_195-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_195
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_196/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_196-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_196
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_197/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_197-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_197
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_198/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_198-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_198
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_199/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_199-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_199
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_19/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_19-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_19
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_1/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_1-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_1
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_200/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_200-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_200
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_201/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_201-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_201
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_202/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_202-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_202
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_203/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_203-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_203
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_204/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_204-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_204
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_205/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_205-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_205
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_206/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_206-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_206
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_207/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_207-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_207
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_208/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_208-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_208
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_209/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_209-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_209
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_20/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_20-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_20
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_210/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_210-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_210
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_211/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_211-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_211
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_212/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_212-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_212
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_213/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_213-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_213
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_214/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_214-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_214
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_215/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_215-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_215
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_216/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_216-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_216
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_217/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_217-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_217
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_218/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_218-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_218
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_219/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_219-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_219
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_21/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_21-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_21
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_220/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_220-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_220
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_221/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_221-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_221
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_222/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_222-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_222
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_223/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_223-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_223
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_224/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_224-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_224
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_225/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_225-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_225
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_226/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_226-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_226
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_227/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_227-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_227
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_228/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_228-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_228
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_229/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_229-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_229
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_22/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_22-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_22
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_230/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_230-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_230
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_231/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_231-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_231
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_232/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_232-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_232
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_233/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_233-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_233
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_234/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_234-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_234
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_235/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_235-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_235
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_236/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_236-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_236
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_237/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_237-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_237
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_238/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_238-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_238
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_239/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_239-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_239
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_23/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_23-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_23
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_240/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_240-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_240
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_241/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_241-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_241
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_242/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_242-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_242
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_243/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_243-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_243
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_244/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_244-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_244
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_245/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_245-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_245
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_246/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_246-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_246
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_247/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_247-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_247
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_248/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_248-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_248
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_249/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_249-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_249
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_24/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_24-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_24
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_250/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_250-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_250
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_251/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_251-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_251
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_252/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_252-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_252
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_253/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_253-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_253
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_254/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_254-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_254
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_255/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_255-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_255
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_256/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_256-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_256
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_257/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_257-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_257
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_258/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_258-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_258
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_259/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_259-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_259
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_25/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_25-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_25
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_260/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_260-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_260
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_261/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_261-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_261
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_262/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_262-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_262
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_263/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_263-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_263
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_264/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_264-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_264
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_265/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_265-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_265
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_266/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_266-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_266
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_267/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_267-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_267
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_268/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_268-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_268
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_269/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_269-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_269
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_26/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_26-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_26
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_270/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_270-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_270
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_271/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_271-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_271
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_272/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_272-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_272
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_273/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_273-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_273
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_274/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_274-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_274
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_275/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_275-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_275
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_276/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_276-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_276
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_277/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_277-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_277
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_278/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_278-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_278
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_279/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_279-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_279
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_27/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_27-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_27
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_280/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_280-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_280
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_281/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_281-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_281
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_282/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_282-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_282
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_283/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_283-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_283
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_284/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_284-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_284
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_285/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_285-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_285
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_286/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_286-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_286
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_287/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_287-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_287
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_288/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_288-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_288
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_289/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_289-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_289
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_28/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_28-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_28
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_290/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_290-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_290
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_291/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_291-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_291
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_292/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_292-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_292
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_293/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_293-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_293
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_294/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_294-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_294
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_295/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_295-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_295
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_296/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_296-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_296
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_297/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_297-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_297
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_298/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_298-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_298
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_299/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_299-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_299
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_29/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_29-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_29
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_2/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_2-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_2
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_300/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_300-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_300
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_301/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_301-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_301
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_302/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_302-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_302
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_303/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_303-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_303
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_304/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_304-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_304
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_305/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_305-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_305
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_306/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_306-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_306
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_307/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_307-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_307
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_308/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_308-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_308
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_309/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_309-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_309
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_30/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_30-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_30
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_310/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_310-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_310
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_311/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_311-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_311
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_312/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_312-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_312
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_313/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_313-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_313
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_314/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_314-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_314
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_315/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_315-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_315
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_316/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_316-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_316
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_317/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_317-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_317
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_318/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_318-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_318
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_319/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_319-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_319
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_31/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_31-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_31
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_320/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_320-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_320
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_321/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_321-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_321
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_322/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_322-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_322
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_323/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_323-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_323
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_324/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_324-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_324
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_325/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_325-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_325
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_326/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_326-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_326
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_327/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_327-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_327
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_328/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_328-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_328
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_329/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_329-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_329
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_32/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_32-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_32
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_330/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_330-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_330
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_331/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_331-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_331
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_332/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_332-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_332
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_333/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_333-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_333
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_334/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_334-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_334
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_335/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_335-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_335
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_336/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_336-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_336
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_337/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_337-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_337
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_338/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_338-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_338
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_339/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_339-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_339
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_33/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_33-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_33
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_340/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_340-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_340
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_341/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_341-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_341
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_342/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_342-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_342
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_343/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_343-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_343
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_344/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_344-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_344
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_345/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_345-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_345
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_346/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_346-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_346
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_347/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_347-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_347
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_348/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_348-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_348
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_349/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_349-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_349
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_34/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_34-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_34
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_350/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_350-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_350
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_351/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_351-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_351
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_352/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_352-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_352
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_353/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_353-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_353
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_354/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_354-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_354
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_355/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_355-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_355
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_356/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_356-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_356
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_357/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_357-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_357
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_358/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_358-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_358
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_359/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_359-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_359
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_35/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_35-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_35
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_360/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_360-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_360
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_361/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_361-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_361
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_362/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_362-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_362
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_363/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_363-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_363
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_364/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_364-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_364
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_365/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_365-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_365
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_366/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_366-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_366
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_367/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_367-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_367
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_368/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_368-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_368
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_369/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_369-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_369
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_36/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_36-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_36
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_370/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_370-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_370
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_371/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_371-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_371
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_372/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_372-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_372
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_373/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_373-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_373
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_374/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_374-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_374
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_375/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_375-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_375
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_376/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_376-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_376
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_377/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_377-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_377
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_378/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_378-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_378
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_379/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_379-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_379
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_37/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_37-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_37
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_380/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_380-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_380
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_381/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_381-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_381
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_382/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_382-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_382
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_383/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_383-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_383
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_384/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_384-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_384
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_385/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_385-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_385
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_386/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_386-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_386
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_387/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_387-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_387
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_388/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_388-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_388
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_389/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_389-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_389
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_38/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_38-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_38
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_390/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_390-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_390
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_391/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_391-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_391
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_392/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_392-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_392
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_393/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_393-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_393
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_394/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_394-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_394
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_395/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_395-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_395
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_396/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_396-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_396
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_397/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_397-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_397
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_398/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_398-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_398
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_399/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_399-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_399
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_39/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_39-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_39
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_3/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_3-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_3
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_400/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_400-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_400
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_401/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_401-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_401
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_402/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_402-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_402
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_403/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_403-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_403
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_404/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_404-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_404
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_405/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_405-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_405
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_406/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_406-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_406
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_407/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_407-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_407
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_408/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_408-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_408
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_409/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_409-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_409
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_40/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_40-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_40
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_410/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_410-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_410
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_411/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_411-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_411
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_412/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_412-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_412
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_413/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_413-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_413
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_414/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_414-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_414
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_415/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_415-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_415
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_416/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_416-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_416
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_417/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_417-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_417
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_418/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_418-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_418
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_419/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_419-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_419
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_41/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_41-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_41
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_420/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_420-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_420
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_421/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_421-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_421
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_422/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_422-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_422
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_423/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_423-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_423
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_424/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_424-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_424
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_425/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_425-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_425
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_426/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_426-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_426
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_427/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_427-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_427
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_428/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_428-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_428
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_429/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_429-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_429
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_42/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_42-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_42
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_430/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_430-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_430
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_431/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_431-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_431
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_432/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_432-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_432
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_433/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_433-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_433
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_434/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_434-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_434
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_435/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_435-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_435
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_436/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_436-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_436
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_437/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_437-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_437
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_438/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_438-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_438
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_439/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_439-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_439
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_43/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_43-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_43
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_440/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_440-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_440
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_441/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_441-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_441
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_442/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_442-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_442
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_443/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_443-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_443
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_444/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_444-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_444
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_445/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_445-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_445
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_446/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_446-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_446
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_447/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_447-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_447
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_448/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_448-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_448
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_449/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_449-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_449
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_44/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_44-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_44
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_450/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_450-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_450
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_451/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_451-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_451
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_452/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_452-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_452
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_453/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_453-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_453
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_454/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_454-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_454
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_455/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_455-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_455
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_456/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_456-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_456
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_457/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_457-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_457
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_458/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_458-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_458
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_459/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_459-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_459
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_45/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_45-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_45
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_460/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_460-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_460
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_461/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_461-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_461
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_462/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_462-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_462
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_463/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_463-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_463
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_464/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_464-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_464
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_465/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_465-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_465
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_466/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_466-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_466
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_467/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_467-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_467
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_468/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_468-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_468
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_469/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_469-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_469
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_46/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_46-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_46
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_470/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_470-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_470
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_471/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_471-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_471
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_472/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_472-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_472
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_473/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_473-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_473
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_474/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_474-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_474
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_475/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_475-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_475
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_476/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_476-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_476
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_477/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_477-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_477
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_478/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_478-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_478
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_479/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_479-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_479
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_47/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_47-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_47
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_480/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_480-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_480
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_481/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_481-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_481
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_482/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_482-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_482
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_483/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_483-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_483
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_484/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_484-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_484
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_485/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_485-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_485
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_486/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_486-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_486
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_487/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_487-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_487
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_488/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_488-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_488
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_489/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_489-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_489
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_48/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_48-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_48
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_490/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_490-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_490
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_491/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_491-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_491
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_492/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_492-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_492
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_493/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_493-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_493
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_494/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_494-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_494
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_495/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_495-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_495
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_496/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_496-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_496
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_497/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_497-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_497
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_498/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_498-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_498
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_499/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_499-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_499
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_49/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_49-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_49
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_4/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_4-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_4
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_500/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_500-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_500
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_501/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_501-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_501
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_502/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_502-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_502
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_503/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_503-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_503
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_504/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_504-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_504
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_505/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_505-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_505
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_506/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_506-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_506
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_507/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_507-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_507
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_508/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_508-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_508
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_509/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_509-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_509
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_50/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_50-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_50
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_510/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_510-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_510
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_511/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_511-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_511
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_512/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_512-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_512
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_513/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_513-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_513
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_514/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_514-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_514
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_515/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_515-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_515
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_516/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_516-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_516
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_517/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_517-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_517
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_518/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_518-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_518
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_519/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_519-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_519
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_51/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_51-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_51
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_520/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_520-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_520
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_521/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_521-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_521
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_522/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_522-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_522
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_523/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_523-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_523
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_524/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_524-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_524
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_525/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_525-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_525
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_526/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_526-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_526
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_527/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_527-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_527
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_528/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_528-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_528
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_529/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_529-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_529
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_52/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_52-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_52
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_530/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_530-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_530
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_531/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_531-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_531
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_532/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_532-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_532
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_533/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_533-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_533
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_534/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_534-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_534
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_535/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_535-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_535
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_536/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_536-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_536
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_537/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_537-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_537
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_538/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_538-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_538
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_539/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_539-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_539
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_53/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_53-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_53
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_540/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_540-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_540
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_541/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_541-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_541
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_542/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_542-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_542
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_543/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_543-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_543
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_544/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_544-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_544
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_545/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_545-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_545
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_546/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_546-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_546
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_547/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_547-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_547
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_548/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_548-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_548
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_549/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_549-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_549
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_54/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_54-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_54
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_550/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_550-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_550
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_551/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_551-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_551
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_552/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_552-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_552
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_553/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_553-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_553
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_554/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_554-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_554
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_555/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_555-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_555
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_556/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_556-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_556
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_557/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_557-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_557
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_558/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_558-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_558
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_559/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_559-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_559
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_55/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_55-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_55
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_560/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_560-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_560
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_561/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_561-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_561
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_562/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_562-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_562
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_563/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_563-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_563
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_564/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_564-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_564
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_565/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_565-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_565
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_566/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_566-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_566
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_567/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_567-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_567
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_568/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_568-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_568
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_569/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_569-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_569
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_56/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_56-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_56
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_570/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_570-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_570
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_571/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_571-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_571
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_572/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_572-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_572
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_573/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_573-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_573
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_574/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_574-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_574
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_575/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_575-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_575
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_576/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_576-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_576
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_577/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_577-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_577
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_578/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_578-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_578
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_579/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_579-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_579
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_57/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_57-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_57
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_580/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_580-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_580
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_581/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_581-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_581
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_582/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_582-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_582
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_583/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_583-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_583
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_584/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_584-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_584
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_585/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_585-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_585
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_586/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_586-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_586
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_587/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_587-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_587
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_588/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_588-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_588
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_589/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_589-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_589
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_58/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_58-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_58
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_590/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_590-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_590
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_591/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_591-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_591
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_592/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_592-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_592
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_593/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_593-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_593
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_594/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_594-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_594
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_595/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_595-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_595
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_596/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_596-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_596
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_597/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_597-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_597
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_598/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_598-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_598
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_599/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_599-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_599
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_59/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_59-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_59
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_5/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_5-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_5
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_600/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_600-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_600
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_601/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_601-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_601
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_602/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_602-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_602
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_603/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_603-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_603
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_604/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_604-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_604
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_605/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_605-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_605
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_606/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_606-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_606
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_607/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_607-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_607
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_608/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_608-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_608
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_609/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_609-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_609
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_60/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_60-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_60
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_610/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_610-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_610
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_611/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_611-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_611
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_612/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_612-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_612
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_613/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_613-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_613
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_614/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_614-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_614
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_615/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_615-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_615
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_616/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_616-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_616
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_617/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_617-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_617
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_618/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_618-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_618
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_619/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_619-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_619
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_61/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_61-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_61
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_620/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_620-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_620
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_621/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_621-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_621
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_622/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_622-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_622
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_623/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_623-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_623
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_624/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_624-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_624
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_625/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_625-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_625
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_626/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_626-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_626
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_627/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_627-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_627
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_628/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_628-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_628
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_629/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_629-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_629
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_62/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_62-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_62
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_630/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_630-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_630
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_631/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_631-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_631
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_632/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_632-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_632
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_633/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_633-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_633
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_634/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_634-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_634
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_635/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_635-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_635
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_636/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_636-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_636
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_637/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_637-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_637
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_638/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_638-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_638
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_639/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_639-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_639
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_63/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_63-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_63
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_640/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_640-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_640
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_641/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_641-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_641
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_642/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_642-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_642
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_643/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_643-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_643
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_644/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_644-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_644
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_645/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_645-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_645
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_646/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_646-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_646
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_647/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_647-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_647
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_648/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_648-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_648
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_649/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_649-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_649
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_64/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_64-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_64
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_650/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_650-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_650
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_651/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_651-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_651
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_652/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_652-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_652
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_653/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_653-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_653
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_654/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_654-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_654
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_655/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_655-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_655
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_656/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_656-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_656
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_657/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_657-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_657
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_658/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_658-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_658
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_659/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_659-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_659
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_65/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_65-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_65
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_660/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_660-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_660
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_661/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_661-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_661
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_662/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_662-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_662
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_663/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_663-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_663
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_664/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_664-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_664
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_665/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_665-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_665
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_666/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_666-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_666
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_667/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_667-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_667
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_668/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_668-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_668
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_669/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_669-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_669
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_66/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_66-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_66
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_670/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_670-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_670
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_671/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_671-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_671
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_672/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_672-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_672
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_673/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_673-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_673
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_674/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_674-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_674
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_675/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_675-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_675
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_676/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_676-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_676
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_677/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_677-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_677
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_678/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_678-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_678
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_679/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_679-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_679
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_67/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_67-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_67
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_680/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_680-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_680
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_681/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_681-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_681
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_682/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_682-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_682
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_683/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_683-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_683
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_684/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_684-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_684
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_685/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_685-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_685
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_686/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_686-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_686
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_687/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_687-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_687
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_688/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_688-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_688
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_689/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_689-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_689
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_68/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_68-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_68
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_690/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_690-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_690
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_691/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_691-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_691
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_692/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_692-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_692
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_693/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_693-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_693
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_694/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_694-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_694
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_695/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_695-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_695
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_696/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_696-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_696
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_697/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_697-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_697
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_698/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_698-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_698
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_699/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_699-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_699
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_69/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_69-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_69
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_6/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_6-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_6
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_700/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_700-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_700
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_701/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_701-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_701
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_702/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_702-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_702
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_703/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_703-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_703
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_704/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_704-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_704
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_705/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_705-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_705
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_706/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_706-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_706
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_70/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_70-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_70
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_71/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_71-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_71
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_72/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_72-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_72
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_73/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_73-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_73
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_74/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_74-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_74
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_75/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_75-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_75
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_76/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_76-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_76
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_77/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_77-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_77
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_78/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_78-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_78
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_79/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_79-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_79
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_7/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_7-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_7
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_80/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_80-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_80
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_81/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_81-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_81
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_82/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_82-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_82
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_83/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_83-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_83
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_84/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_84-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_84
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_85/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_85-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_85
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_86/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_86-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_86
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_87/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_87-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_87
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_88/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_88-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_88
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_89/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_89-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_89
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_8/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_8-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_8
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_90/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_90-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_90
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_91/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_91-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_91
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_92/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_92-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_92
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_93/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_93-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_93
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_94/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_94-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_94
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_95/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_95-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_95
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_96/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_96-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_96
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_97/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_97-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_97
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_98/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_98-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_98
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_99/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_99-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_99
tombo detect_modifications alternative_model --alternate-bases 5mC 6mA --statistics-file-basename single_fast5-output-FAN06711_bf4f35f0_9/tombo.stats --per-read-statistics-basename single_fast5-output-FAN06711_bf4f35f0_9-guppy/tombo.mods.per_read.alternative --processes 20 --multiprocess-region-size 2000000 --fast5-basedirs single_fast5-output-FAN06711_bf4f35f0_9