/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_0/0 -s single_fast5-output-FAN06711_bf4f35f0_0-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_100/0 -s single_fast5-output-FAN06711_bf4f35f0_100-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_101/0 -s single_fast5-output-FAN06711_bf4f35f0_101-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_102/0 -s single_fast5-output-FAN06711_bf4f35f0_102-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_103/0 -s single_fast5-output-FAN06711_bf4f35f0_103-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_104/0 -s single_fast5-output-FAN06711_bf4f35f0_104-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_105/0 -s single_fast5-output-FAN06711_bf4f35f0_105-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_106/0 -s single_fast5-output-FAN06711_bf4f35f0_106-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_107/0 -s single_fast5-output-FAN06711_bf4f35f0_107-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_108/0 -s single_fast5-output-FAN06711_bf4f35f0_108-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_109/0 -s single_fast5-output-FAN06711_bf4f35f0_109-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_10/0 -s single_fast5-output-FAN06711_bf4f35f0_10-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_110/0 -s single_fast5-output-FAN06711_bf4f35f0_110-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_111/0 -s single_fast5-output-FAN06711_bf4f35f0_111-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_112/0 -s single_fast5-output-FAN06711_bf4f35f0_112-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_113/0 -s single_fast5-output-FAN06711_bf4f35f0_113-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_114/0 -s single_fast5-output-FAN06711_bf4f35f0_114-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_115/0 -s single_fast5-output-FAN06711_bf4f35f0_115-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_116/0 -s single_fast5-output-FAN06711_bf4f35f0_116-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_117/0 -s single_fast5-output-FAN06711_bf4f35f0_117-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_118/0 -s single_fast5-output-FAN06711_bf4f35f0_118-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_119/0 -s single_fast5-output-FAN06711_bf4f35f0_119-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_11/0 -s single_fast5-output-FAN06711_bf4f35f0_11-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_120/0 -s single_fast5-output-FAN06711_bf4f35f0_120-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_121/0 -s single_fast5-output-FAN06711_bf4f35f0_121-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_122/0 -s single_fast5-output-FAN06711_bf4f35f0_122-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_123/0 -s single_fast5-output-FAN06711_bf4f35f0_123-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_124/0 -s single_fast5-output-FAN06711_bf4f35f0_124-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_125/0 -s single_fast5-output-FAN06711_bf4f35f0_125-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_126/0 -s single_fast5-output-FAN06711_bf4f35f0_126-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_127/0 -s single_fast5-output-FAN06711_bf4f35f0_127-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_128/0 -s single_fast5-output-FAN06711_bf4f35f0_128-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_129/0 -s single_fast5-output-FAN06711_bf4f35f0_129-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_12/0 -s single_fast5-output-FAN06711_bf4f35f0_12-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_130/0 -s single_fast5-output-FAN06711_bf4f35f0_130-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_131/0 -s single_fast5-output-FAN06711_bf4f35f0_131-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_132/0 -s single_fast5-output-FAN06711_bf4f35f0_132-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_133/0 -s single_fast5-output-FAN06711_bf4f35f0_133-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_134/0 -s single_fast5-output-FAN06711_bf4f35f0_134-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_135/0 -s single_fast5-output-FAN06711_bf4f35f0_135-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_136/0 -s single_fast5-output-FAN06711_bf4f35f0_136-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_137/0 -s single_fast5-output-FAN06711_bf4f35f0_137-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_138/0 -s single_fast5-output-FAN06711_bf4f35f0_138-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_139/0 -s single_fast5-output-FAN06711_bf4f35f0_139-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_13/0 -s single_fast5-output-FAN06711_bf4f35f0_13-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_140/0 -s single_fast5-output-FAN06711_bf4f35f0_140-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_141/0 -s single_fast5-output-FAN06711_bf4f35f0_141-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_142/0 -s single_fast5-output-FAN06711_bf4f35f0_142-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_143/0 -s single_fast5-output-FAN06711_bf4f35f0_143-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_144/0 -s single_fast5-output-FAN06711_bf4f35f0_144-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_145/0 -s single_fast5-output-FAN06711_bf4f35f0_145-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_146/0 -s single_fast5-output-FAN06711_bf4f35f0_146-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_147/0 -s single_fast5-output-FAN06711_bf4f35f0_147-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_148/0 -s single_fast5-output-FAN06711_bf4f35f0_148-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_149/0 -s single_fast5-output-FAN06711_bf4f35f0_149-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_14/0 -s single_fast5-output-FAN06711_bf4f35f0_14-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_150/0 -s single_fast5-output-FAN06711_bf4f35f0_150-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_151/0 -s single_fast5-output-FAN06711_bf4f35f0_151-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_152/0 -s single_fast5-output-FAN06711_bf4f35f0_152-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_153/0 -s single_fast5-output-FAN06711_bf4f35f0_153-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_154/0 -s single_fast5-output-FAN06711_bf4f35f0_154-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_155/0 -s single_fast5-output-FAN06711_bf4f35f0_155-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_156/0 -s single_fast5-output-FAN06711_bf4f35f0_156-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_157/0 -s single_fast5-output-FAN06711_bf4f35f0_157-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_158/0 -s single_fast5-output-FAN06711_bf4f35f0_158-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_159/0 -s single_fast5-output-FAN06711_bf4f35f0_159-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_15/0 -s single_fast5-output-FAN06711_bf4f35f0_15-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_160/0 -s single_fast5-output-FAN06711_bf4f35f0_160-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_161/0 -s single_fast5-output-FAN06711_bf4f35f0_161-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_162/0 -s single_fast5-output-FAN06711_bf4f35f0_162-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_163/0 -s single_fast5-output-FAN06711_bf4f35f0_163-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_164/0 -s single_fast5-output-FAN06711_bf4f35f0_164-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_165/0 -s single_fast5-output-FAN06711_bf4f35f0_165-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_166/0 -s single_fast5-output-FAN06711_bf4f35f0_166-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_167/0 -s single_fast5-output-FAN06711_bf4f35f0_167-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_168/0 -s single_fast5-output-FAN06711_bf4f35f0_168-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_169/0 -s single_fast5-output-FAN06711_bf4f35f0_169-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_16/0 -s single_fast5-output-FAN06711_bf4f35f0_16-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_170/0 -s single_fast5-output-FAN06711_bf4f35f0_170-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_171/0 -s single_fast5-output-FAN06711_bf4f35f0_171-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_172/0 -s single_fast5-output-FAN06711_bf4f35f0_172-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_173/0 -s single_fast5-output-FAN06711_bf4f35f0_173-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_174/0 -s single_fast5-output-FAN06711_bf4f35f0_174-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_175/0 -s single_fast5-output-FAN06711_bf4f35f0_175-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_176/0 -s single_fast5-output-FAN06711_bf4f35f0_176-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_177/0 -s single_fast5-output-FAN06711_bf4f35f0_177-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_178/0 -s single_fast5-output-FAN06711_bf4f35f0_178-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_179/0 -s single_fast5-output-FAN06711_bf4f35f0_179-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_17/0 -s single_fast5-output-FAN06711_bf4f35f0_17-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_180/0 -s single_fast5-output-FAN06711_bf4f35f0_180-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_181/0 -s single_fast5-output-FAN06711_bf4f35f0_181-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_182/0 -s single_fast5-output-FAN06711_bf4f35f0_182-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_183/0 -s single_fast5-output-FAN06711_bf4f35f0_183-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_184/0 -s single_fast5-output-FAN06711_bf4f35f0_184-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_185/0 -s single_fast5-output-FAN06711_bf4f35f0_185-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_186/0 -s single_fast5-output-FAN06711_bf4f35f0_186-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_187/0 -s single_fast5-output-FAN06711_bf4f35f0_187-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_188/0 -s single_fast5-output-FAN06711_bf4f35f0_188-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_189/0 -s single_fast5-output-FAN06711_bf4f35f0_189-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_18/0 -s single_fast5-output-FAN06711_bf4f35f0_18-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_190/0 -s single_fast5-output-FAN06711_bf4f35f0_190-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_191/0 -s single_fast5-output-FAN06711_bf4f35f0_191-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_192/0 -s single_fast5-output-FAN06711_bf4f35f0_192-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_193/0 -s single_fast5-output-FAN06711_bf4f35f0_193-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_194/0 -s single_fast5-output-FAN06711_bf4f35f0_194-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_195/0 -s single_fast5-output-FAN06711_bf4f35f0_195-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_196/0 -s single_fast5-output-FAN06711_bf4f35f0_196-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_197/0 -s single_fast5-output-FAN06711_bf4f35f0_197-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_198/0 -s single_fast5-output-FAN06711_bf4f35f0_198-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_199/0 -s single_fast5-output-FAN06711_bf4f35f0_199-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_19/0 -s single_fast5-output-FAN06711_bf4f35f0_19-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_1/0 -s single_fast5-output-FAN06711_bf4f35f0_1-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_200/0 -s single_fast5-output-FAN06711_bf4f35f0_200-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_201/0 -s single_fast5-output-FAN06711_bf4f35f0_201-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_202/0 -s single_fast5-output-FAN06711_bf4f35f0_202-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_203/0 -s single_fast5-output-FAN06711_bf4f35f0_203-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_204/0 -s single_fast5-output-FAN06711_bf4f35f0_204-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_205/0 -s single_fast5-output-FAN06711_bf4f35f0_205-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_206/0 -s single_fast5-output-FAN06711_bf4f35f0_206-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_207/0 -s single_fast5-output-FAN06711_bf4f35f0_207-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_208/0 -s single_fast5-output-FAN06711_bf4f35f0_208-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_209/0 -s single_fast5-output-FAN06711_bf4f35f0_209-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_20/0 -s single_fast5-output-FAN06711_bf4f35f0_20-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_210/0 -s single_fast5-output-FAN06711_bf4f35f0_210-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_211/0 -s single_fast5-output-FAN06711_bf4f35f0_211-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_212/0 -s single_fast5-output-FAN06711_bf4f35f0_212-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_213/0 -s single_fast5-output-FAN06711_bf4f35f0_213-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_214/0 -s single_fast5-output-FAN06711_bf4f35f0_214-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_215/0 -s single_fast5-output-FAN06711_bf4f35f0_215-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_216/0 -s single_fast5-output-FAN06711_bf4f35f0_216-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_217/0 -s single_fast5-output-FAN06711_bf4f35f0_217-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_218/0 -s single_fast5-output-FAN06711_bf4f35f0_218-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_219/0 -s single_fast5-output-FAN06711_bf4f35f0_219-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_21/0 -s single_fast5-output-FAN06711_bf4f35f0_21-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_220/0 -s single_fast5-output-FAN06711_bf4f35f0_220-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_221/0 -s single_fast5-output-FAN06711_bf4f35f0_221-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_222/0 -s single_fast5-output-FAN06711_bf4f35f0_222-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_223/0 -s single_fast5-output-FAN06711_bf4f35f0_223-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_224/0 -s single_fast5-output-FAN06711_bf4f35f0_224-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_225/0 -s single_fast5-output-FAN06711_bf4f35f0_225-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_226/0 -s single_fast5-output-FAN06711_bf4f35f0_226-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_227/0 -s single_fast5-output-FAN06711_bf4f35f0_227-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_228/0 -s single_fast5-output-FAN06711_bf4f35f0_228-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_229/0 -s single_fast5-output-FAN06711_bf4f35f0_229-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_22/0 -s single_fast5-output-FAN06711_bf4f35f0_22-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_230/0 -s single_fast5-output-FAN06711_bf4f35f0_230-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_231/0 -s single_fast5-output-FAN06711_bf4f35f0_231-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_232/0 -s single_fast5-output-FAN06711_bf4f35f0_232-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_233/0 -s single_fast5-output-FAN06711_bf4f35f0_233-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_234/0 -s single_fast5-output-FAN06711_bf4f35f0_234-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_235/0 -s single_fast5-output-FAN06711_bf4f35f0_235-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_236/0 -s single_fast5-output-FAN06711_bf4f35f0_236-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_237/0 -s single_fast5-output-FAN06711_bf4f35f0_237-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_238/0 -s single_fast5-output-FAN06711_bf4f35f0_238-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_239/0 -s single_fast5-output-FAN06711_bf4f35f0_239-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_23/0 -s single_fast5-output-FAN06711_bf4f35f0_23-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_240/0 -s single_fast5-output-FAN06711_bf4f35f0_240-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_241/0 -s single_fast5-output-FAN06711_bf4f35f0_241-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_242/0 -s single_fast5-output-FAN06711_bf4f35f0_242-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_243/0 -s single_fast5-output-FAN06711_bf4f35f0_243-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_244/0 -s single_fast5-output-FAN06711_bf4f35f0_244-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_245/0 -s single_fast5-output-FAN06711_bf4f35f0_245-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_246/0 -s single_fast5-output-FAN06711_bf4f35f0_246-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_247/0 -s single_fast5-output-FAN06711_bf4f35f0_247-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_248/0 -s single_fast5-output-FAN06711_bf4f35f0_248-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_249/0 -s single_fast5-output-FAN06711_bf4f35f0_249-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_24/0 -s single_fast5-output-FAN06711_bf4f35f0_24-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_250/0 -s single_fast5-output-FAN06711_bf4f35f0_250-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_251/0 -s single_fast5-output-FAN06711_bf4f35f0_251-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_252/0 -s single_fast5-output-FAN06711_bf4f35f0_252-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_253/0 -s single_fast5-output-FAN06711_bf4f35f0_253-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_254/0 -s single_fast5-output-FAN06711_bf4f35f0_254-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_255/0 -s single_fast5-output-FAN06711_bf4f35f0_255-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_256/0 -s single_fast5-output-FAN06711_bf4f35f0_256-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_257/0 -s single_fast5-output-FAN06711_bf4f35f0_257-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_258/0 -s single_fast5-output-FAN06711_bf4f35f0_258-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_259/0 -s single_fast5-output-FAN06711_bf4f35f0_259-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_25/0 -s single_fast5-output-FAN06711_bf4f35f0_25-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_260/0 -s single_fast5-output-FAN06711_bf4f35f0_260-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_261/0 -s single_fast5-output-FAN06711_bf4f35f0_261-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_262/0 -s single_fast5-output-FAN06711_bf4f35f0_262-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_263/0 -s single_fast5-output-FAN06711_bf4f35f0_263-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_264/0 -s single_fast5-output-FAN06711_bf4f35f0_264-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_265/0 -s single_fast5-output-FAN06711_bf4f35f0_265-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_266/0 -s single_fast5-output-FAN06711_bf4f35f0_266-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_267/0 -s single_fast5-output-FAN06711_bf4f35f0_267-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_268/0 -s single_fast5-output-FAN06711_bf4f35f0_268-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_269/0 -s single_fast5-output-FAN06711_bf4f35f0_269-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_26/0 -s single_fast5-output-FAN06711_bf4f35f0_26-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_270/0 -s single_fast5-output-FAN06711_bf4f35f0_270-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_271/0 -s single_fast5-output-FAN06711_bf4f35f0_271-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_272/0 -s single_fast5-output-FAN06711_bf4f35f0_272-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_273/0 -s single_fast5-output-FAN06711_bf4f35f0_273-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_274/0 -s single_fast5-output-FAN06711_bf4f35f0_274-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_275/0 -s single_fast5-output-FAN06711_bf4f35f0_275-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_276/0 -s single_fast5-output-FAN06711_bf4f35f0_276-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_277/0 -s single_fast5-output-FAN06711_bf4f35f0_277-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_278/0 -s single_fast5-output-FAN06711_bf4f35f0_278-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_279/0 -s single_fast5-output-FAN06711_bf4f35f0_279-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_27/0 -s single_fast5-output-FAN06711_bf4f35f0_27-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_280/0 -s single_fast5-output-FAN06711_bf4f35f0_280-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_281/0 -s single_fast5-output-FAN06711_bf4f35f0_281-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_282/0 -s single_fast5-output-FAN06711_bf4f35f0_282-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_283/0 -s single_fast5-output-FAN06711_bf4f35f0_283-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_284/0 -s single_fast5-output-FAN06711_bf4f35f0_284-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_285/0 -s single_fast5-output-FAN06711_bf4f35f0_285-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_286/0 -s single_fast5-output-FAN06711_bf4f35f0_286-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_287/0 -s single_fast5-output-FAN06711_bf4f35f0_287-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_288/0 -s single_fast5-output-FAN06711_bf4f35f0_288-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_289/0 -s single_fast5-output-FAN06711_bf4f35f0_289-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_28/0 -s single_fast5-output-FAN06711_bf4f35f0_28-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_290/0 -s single_fast5-output-FAN06711_bf4f35f0_290-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_291/0 -s single_fast5-output-FAN06711_bf4f35f0_291-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_292/0 -s single_fast5-output-FAN06711_bf4f35f0_292-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_293/0 -s single_fast5-output-FAN06711_bf4f35f0_293-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_294/0 -s single_fast5-output-FAN06711_bf4f35f0_294-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_295/0 -s single_fast5-output-FAN06711_bf4f35f0_295-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_296/0 -s single_fast5-output-FAN06711_bf4f35f0_296-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_297/0 -s single_fast5-output-FAN06711_bf4f35f0_297-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_298/0 -s single_fast5-output-FAN06711_bf4f35f0_298-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_299/0 -s single_fast5-output-FAN06711_bf4f35f0_299-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_29/0 -s single_fast5-output-FAN06711_bf4f35f0_29-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_2/0 -s single_fast5-output-FAN06711_bf4f35f0_2-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_300/0 -s single_fast5-output-FAN06711_bf4f35f0_300-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_301/0 -s single_fast5-output-FAN06711_bf4f35f0_301-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_302/0 -s single_fast5-output-FAN06711_bf4f35f0_302-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_303/0 -s single_fast5-output-FAN06711_bf4f35f0_303-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_304/0 -s single_fast5-output-FAN06711_bf4f35f0_304-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_305/0 -s single_fast5-output-FAN06711_bf4f35f0_305-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_306/0 -s single_fast5-output-FAN06711_bf4f35f0_306-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_307/0 -s single_fast5-output-FAN06711_bf4f35f0_307-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_308/0 -s single_fast5-output-FAN06711_bf4f35f0_308-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_309/0 -s single_fast5-output-FAN06711_bf4f35f0_309-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_30/0 -s single_fast5-output-FAN06711_bf4f35f0_30-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_310/0 -s single_fast5-output-FAN06711_bf4f35f0_310-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_311/0 -s single_fast5-output-FAN06711_bf4f35f0_311-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_312/0 -s single_fast5-output-FAN06711_bf4f35f0_312-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_313/0 -s single_fast5-output-FAN06711_bf4f35f0_313-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_314/0 -s single_fast5-output-FAN06711_bf4f35f0_314-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_315/0 -s single_fast5-output-FAN06711_bf4f35f0_315-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_316/0 -s single_fast5-output-FAN06711_bf4f35f0_316-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_317/0 -s single_fast5-output-FAN06711_bf4f35f0_317-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_318/0 -s single_fast5-output-FAN06711_bf4f35f0_318-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_319/0 -s single_fast5-output-FAN06711_bf4f35f0_319-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_31/0 -s single_fast5-output-FAN06711_bf4f35f0_31-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_320/0 -s single_fast5-output-FAN06711_bf4f35f0_320-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_321/0 -s single_fast5-output-FAN06711_bf4f35f0_321-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_322/0 -s single_fast5-output-FAN06711_bf4f35f0_322-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_323/0 -s single_fast5-output-FAN06711_bf4f35f0_323-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_324/0 -s single_fast5-output-FAN06711_bf4f35f0_324-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_325/0 -s single_fast5-output-FAN06711_bf4f35f0_325-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_326/0 -s single_fast5-output-FAN06711_bf4f35f0_326-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_327/0 -s single_fast5-output-FAN06711_bf4f35f0_327-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_328/0 -s single_fast5-output-FAN06711_bf4f35f0_328-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_329/0 -s single_fast5-output-FAN06711_bf4f35f0_329-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_32/0 -s single_fast5-output-FAN06711_bf4f35f0_32-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_330/0 -s single_fast5-output-FAN06711_bf4f35f0_330-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_331/0 -s single_fast5-output-FAN06711_bf4f35f0_331-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_332/0 -s single_fast5-output-FAN06711_bf4f35f0_332-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_333/0 -s single_fast5-output-FAN06711_bf4f35f0_333-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_334/0 -s single_fast5-output-FAN06711_bf4f35f0_334-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_335/0 -s single_fast5-output-FAN06711_bf4f35f0_335-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_336/0 -s single_fast5-output-FAN06711_bf4f35f0_336-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_337/0 -s single_fast5-output-FAN06711_bf4f35f0_337-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_338/0 -s single_fast5-output-FAN06711_bf4f35f0_338-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_339/0 -s single_fast5-output-FAN06711_bf4f35f0_339-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_33/0 -s single_fast5-output-FAN06711_bf4f35f0_33-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_340/0 -s single_fast5-output-FAN06711_bf4f35f0_340-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_341/0 -s single_fast5-output-FAN06711_bf4f35f0_341-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_342/0 -s single_fast5-output-FAN06711_bf4f35f0_342-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_343/0 -s single_fast5-output-FAN06711_bf4f35f0_343-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_344/0 -s single_fast5-output-FAN06711_bf4f35f0_344-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_345/0 -s single_fast5-output-FAN06711_bf4f35f0_345-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_346/0 -s single_fast5-output-FAN06711_bf4f35f0_346-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_347/0 -s single_fast5-output-FAN06711_bf4f35f0_347-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_348/0 -s single_fast5-output-FAN06711_bf4f35f0_348-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_349/0 -s single_fast5-output-FAN06711_bf4f35f0_349-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_34/0 -s single_fast5-output-FAN06711_bf4f35f0_34-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_350/0 -s single_fast5-output-FAN06711_bf4f35f0_350-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_351/0 -s single_fast5-output-FAN06711_bf4f35f0_351-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_352/0 -s single_fast5-output-FAN06711_bf4f35f0_352-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_353/0 -s single_fast5-output-FAN06711_bf4f35f0_353-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_354/0 -s single_fast5-output-FAN06711_bf4f35f0_354-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_355/0 -s single_fast5-output-FAN06711_bf4f35f0_355-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_356/0 -s single_fast5-output-FAN06711_bf4f35f0_356-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_357/0 -s single_fast5-output-FAN06711_bf4f35f0_357-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_358/0 -s single_fast5-output-FAN06711_bf4f35f0_358-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_359/0 -s single_fast5-output-FAN06711_bf4f35f0_359-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_35/0 -s single_fast5-output-FAN06711_bf4f35f0_35-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_360/0 -s single_fast5-output-FAN06711_bf4f35f0_360-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_361/0 -s single_fast5-output-FAN06711_bf4f35f0_361-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_362/0 -s single_fast5-output-FAN06711_bf4f35f0_362-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_363/0 -s single_fast5-output-FAN06711_bf4f35f0_363-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_364/0 -s single_fast5-output-FAN06711_bf4f35f0_364-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_365/0 -s single_fast5-output-FAN06711_bf4f35f0_365-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_366/0 -s single_fast5-output-FAN06711_bf4f35f0_366-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_367/0 -s single_fast5-output-FAN06711_bf4f35f0_367-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_368/0 -s single_fast5-output-FAN06711_bf4f35f0_368-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_369/0 -s single_fast5-output-FAN06711_bf4f35f0_369-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_36/0 -s single_fast5-output-FAN06711_bf4f35f0_36-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_370/0 -s single_fast5-output-FAN06711_bf4f35f0_370-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_371/0 -s single_fast5-output-FAN06711_bf4f35f0_371-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_372/0 -s single_fast5-output-FAN06711_bf4f35f0_372-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_373/0 -s single_fast5-output-FAN06711_bf4f35f0_373-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_374/0 -s single_fast5-output-FAN06711_bf4f35f0_374-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_375/0 -s single_fast5-output-FAN06711_bf4f35f0_375-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_376/0 -s single_fast5-output-FAN06711_bf4f35f0_376-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_377/0 -s single_fast5-output-FAN06711_bf4f35f0_377-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_378/0 -s single_fast5-output-FAN06711_bf4f35f0_378-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_379/0 -s single_fast5-output-FAN06711_bf4f35f0_379-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_37/0 -s single_fast5-output-FAN06711_bf4f35f0_37-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_380/0 -s single_fast5-output-FAN06711_bf4f35f0_380-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_381/0 -s single_fast5-output-FAN06711_bf4f35f0_381-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_382/0 -s single_fast5-output-FAN06711_bf4f35f0_382-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_383/0 -s single_fast5-output-FAN06711_bf4f35f0_383-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_384/0 -s single_fast5-output-FAN06711_bf4f35f0_384-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_385/0 -s single_fast5-output-FAN06711_bf4f35f0_385-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_386/0 -s single_fast5-output-FAN06711_bf4f35f0_386-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_387/0 -s single_fast5-output-FAN06711_bf4f35f0_387-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_388/0 -s single_fast5-output-FAN06711_bf4f35f0_388-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_389/0 -s single_fast5-output-FAN06711_bf4f35f0_389-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_38/0 -s single_fast5-output-FAN06711_bf4f35f0_38-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_390/0 -s single_fast5-output-FAN06711_bf4f35f0_390-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_391/0 -s single_fast5-output-FAN06711_bf4f35f0_391-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_392/0 -s single_fast5-output-FAN06711_bf4f35f0_392-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_393/0 -s single_fast5-output-FAN06711_bf4f35f0_393-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_394/0 -s single_fast5-output-FAN06711_bf4f35f0_394-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_395/0 -s single_fast5-output-FAN06711_bf4f35f0_395-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_396/0 -s single_fast5-output-FAN06711_bf4f35f0_396-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_397/0 -s single_fast5-output-FAN06711_bf4f35f0_397-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_398/0 -s single_fast5-output-FAN06711_bf4f35f0_398-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_399/0 -s single_fast5-output-FAN06711_bf4f35f0_399-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_39/0 -s single_fast5-output-FAN06711_bf4f35f0_39-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_3/0 -s single_fast5-output-FAN06711_bf4f35f0_3-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_400/0 -s single_fast5-output-FAN06711_bf4f35f0_400-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_401/0 -s single_fast5-output-FAN06711_bf4f35f0_401-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_402/0 -s single_fast5-output-FAN06711_bf4f35f0_402-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_403/0 -s single_fast5-output-FAN06711_bf4f35f0_403-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_404/0 -s single_fast5-output-FAN06711_bf4f35f0_404-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_405/0 -s single_fast5-output-FAN06711_bf4f35f0_405-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_406/0 -s single_fast5-output-FAN06711_bf4f35f0_406-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_407/0 -s single_fast5-output-FAN06711_bf4f35f0_407-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_408/0 -s single_fast5-output-FAN06711_bf4f35f0_408-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_409/0 -s single_fast5-output-FAN06711_bf4f35f0_409-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_40/0 -s single_fast5-output-FAN06711_bf4f35f0_40-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_410/0 -s single_fast5-output-FAN06711_bf4f35f0_410-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_411/0 -s single_fast5-output-FAN06711_bf4f35f0_411-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_412/0 -s single_fast5-output-FAN06711_bf4f35f0_412-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_413/0 -s single_fast5-output-FAN06711_bf4f35f0_413-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_414/0 -s single_fast5-output-FAN06711_bf4f35f0_414-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_415/0 -s single_fast5-output-FAN06711_bf4f35f0_415-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_416/0 -s single_fast5-output-FAN06711_bf4f35f0_416-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_417/0 -s single_fast5-output-FAN06711_bf4f35f0_417-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_418/0 -s single_fast5-output-FAN06711_bf4f35f0_418-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_419/0 -s single_fast5-output-FAN06711_bf4f35f0_419-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_41/0 -s single_fast5-output-FAN06711_bf4f35f0_41-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_420/0 -s single_fast5-output-FAN06711_bf4f35f0_420-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_421/0 -s single_fast5-output-FAN06711_bf4f35f0_421-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_422/0 -s single_fast5-output-FAN06711_bf4f35f0_422-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_423/0 -s single_fast5-output-FAN06711_bf4f35f0_423-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_424/0 -s single_fast5-output-FAN06711_bf4f35f0_424-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_425/0 -s single_fast5-output-FAN06711_bf4f35f0_425-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_426/0 -s single_fast5-output-FAN06711_bf4f35f0_426-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_427/0 -s single_fast5-output-FAN06711_bf4f35f0_427-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_428/0 -s single_fast5-output-FAN06711_bf4f35f0_428-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_429/0 -s single_fast5-output-FAN06711_bf4f35f0_429-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_42/0 -s single_fast5-output-FAN06711_bf4f35f0_42-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_430/0 -s single_fast5-output-FAN06711_bf4f35f0_430-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_431/0 -s single_fast5-output-FAN06711_bf4f35f0_431-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_432/0 -s single_fast5-output-FAN06711_bf4f35f0_432-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_433/0 -s single_fast5-output-FAN06711_bf4f35f0_433-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_434/0 -s single_fast5-output-FAN06711_bf4f35f0_434-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_435/0 -s single_fast5-output-FAN06711_bf4f35f0_435-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_436/0 -s single_fast5-output-FAN06711_bf4f35f0_436-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_437/0 -s single_fast5-output-FAN06711_bf4f35f0_437-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_438/0 -s single_fast5-output-FAN06711_bf4f35f0_438-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_439/0 -s single_fast5-output-FAN06711_bf4f35f0_439-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_43/0 -s single_fast5-output-FAN06711_bf4f35f0_43-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_440/0 -s single_fast5-output-FAN06711_bf4f35f0_440-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_441/0 -s single_fast5-output-FAN06711_bf4f35f0_441-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_442/0 -s single_fast5-output-FAN06711_bf4f35f0_442-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_443/0 -s single_fast5-output-FAN06711_bf4f35f0_443-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_444/0 -s single_fast5-output-FAN06711_bf4f35f0_444-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_445/0 -s single_fast5-output-FAN06711_bf4f35f0_445-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_446/0 -s single_fast5-output-FAN06711_bf4f35f0_446-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_447/0 -s single_fast5-output-FAN06711_bf4f35f0_447-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_448/0 -s single_fast5-output-FAN06711_bf4f35f0_448-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_449/0 -s single_fast5-output-FAN06711_bf4f35f0_449-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_44/0 -s single_fast5-output-FAN06711_bf4f35f0_44-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_450/0 -s single_fast5-output-FAN06711_bf4f35f0_450-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_451/0 -s single_fast5-output-FAN06711_bf4f35f0_451-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_452/0 -s single_fast5-output-FAN06711_bf4f35f0_452-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_453/0 -s single_fast5-output-FAN06711_bf4f35f0_453-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_454/0 -s single_fast5-output-FAN06711_bf4f35f0_454-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_455/0 -s single_fast5-output-FAN06711_bf4f35f0_455-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_456/0 -s single_fast5-output-FAN06711_bf4f35f0_456-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_457/0 -s single_fast5-output-FAN06711_bf4f35f0_457-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_458/0 -s single_fast5-output-FAN06711_bf4f35f0_458-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_459/0 -s single_fast5-output-FAN06711_bf4f35f0_459-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_45/0 -s single_fast5-output-FAN06711_bf4f35f0_45-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_460/0 -s single_fast5-output-FAN06711_bf4f35f0_460-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_461/0 -s single_fast5-output-FAN06711_bf4f35f0_461-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_462/0 -s single_fast5-output-FAN06711_bf4f35f0_462-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_463/0 -s single_fast5-output-FAN06711_bf4f35f0_463-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_464/0 -s single_fast5-output-FAN06711_bf4f35f0_464-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_465/0 -s single_fast5-output-FAN06711_bf4f35f0_465-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_466/0 -s single_fast5-output-FAN06711_bf4f35f0_466-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_467/0 -s single_fast5-output-FAN06711_bf4f35f0_467-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_468/0 -s single_fast5-output-FAN06711_bf4f35f0_468-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_469/0 -s single_fast5-output-FAN06711_bf4f35f0_469-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_46/0 -s single_fast5-output-FAN06711_bf4f35f0_46-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_470/0 -s single_fast5-output-FAN06711_bf4f35f0_470-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_471/0 -s single_fast5-output-FAN06711_bf4f35f0_471-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_472/0 -s single_fast5-output-FAN06711_bf4f35f0_472-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_473/0 -s single_fast5-output-FAN06711_bf4f35f0_473-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_474/0 -s single_fast5-output-FAN06711_bf4f35f0_474-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_475/0 -s single_fast5-output-FAN06711_bf4f35f0_475-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_476/0 -s single_fast5-output-FAN06711_bf4f35f0_476-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_477/0 -s single_fast5-output-FAN06711_bf4f35f0_477-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_478/0 -s single_fast5-output-FAN06711_bf4f35f0_478-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_479/0 -s single_fast5-output-FAN06711_bf4f35f0_479-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_47/0 -s single_fast5-output-FAN06711_bf4f35f0_47-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_480/0 -s single_fast5-output-FAN06711_bf4f35f0_480-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_481/0 -s single_fast5-output-FAN06711_bf4f35f0_481-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_482/0 -s single_fast5-output-FAN06711_bf4f35f0_482-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_483/0 -s single_fast5-output-FAN06711_bf4f35f0_483-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_484/0 -s single_fast5-output-FAN06711_bf4f35f0_484-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_485/0 -s single_fast5-output-FAN06711_bf4f35f0_485-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_486/0 -s single_fast5-output-FAN06711_bf4f35f0_486-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_487/0 -s single_fast5-output-FAN06711_bf4f35f0_487-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_488/0 -s single_fast5-output-FAN06711_bf4f35f0_488-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_489/0 -s single_fast5-output-FAN06711_bf4f35f0_489-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_48/0 -s single_fast5-output-FAN06711_bf4f35f0_48-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_490/0 -s single_fast5-output-FAN06711_bf4f35f0_490-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_491/0 -s single_fast5-output-FAN06711_bf4f35f0_491-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_492/0 -s single_fast5-output-FAN06711_bf4f35f0_492-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_493/0 -s single_fast5-output-FAN06711_bf4f35f0_493-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_494/0 -s single_fast5-output-FAN06711_bf4f35f0_494-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_495/0 -s single_fast5-output-FAN06711_bf4f35f0_495-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_496/0 -s single_fast5-output-FAN06711_bf4f35f0_496-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_497/0 -s single_fast5-output-FAN06711_bf4f35f0_497-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_498/0 -s single_fast5-output-FAN06711_bf4f35f0_498-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_499/0 -s single_fast5-output-FAN06711_bf4f35f0_499-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_49/0 -s single_fast5-output-FAN06711_bf4f35f0_49-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_4/0 -s single_fast5-output-FAN06711_bf4f35f0_4-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_500/0 -s single_fast5-output-FAN06711_bf4f35f0_500-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_501/0 -s single_fast5-output-FAN06711_bf4f35f0_501-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_502/0 -s single_fast5-output-FAN06711_bf4f35f0_502-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_503/0 -s single_fast5-output-FAN06711_bf4f35f0_503-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_504/0 -s single_fast5-output-FAN06711_bf4f35f0_504-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_505/0 -s single_fast5-output-FAN06711_bf4f35f0_505-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_506/0 -s single_fast5-output-FAN06711_bf4f35f0_506-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_507/0 -s single_fast5-output-FAN06711_bf4f35f0_507-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_508/0 -s single_fast5-output-FAN06711_bf4f35f0_508-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_509/0 -s single_fast5-output-FAN06711_bf4f35f0_509-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_50/0 -s single_fast5-output-FAN06711_bf4f35f0_50-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_510/0 -s single_fast5-output-FAN06711_bf4f35f0_510-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_511/0 -s single_fast5-output-FAN06711_bf4f35f0_511-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_512/0 -s single_fast5-output-FAN06711_bf4f35f0_512-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_513/0 -s single_fast5-output-FAN06711_bf4f35f0_513-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_514/0 -s single_fast5-output-FAN06711_bf4f35f0_514-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_515/0 -s single_fast5-output-FAN06711_bf4f35f0_515-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_516/0 -s single_fast5-output-FAN06711_bf4f35f0_516-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_517/0 -s single_fast5-output-FAN06711_bf4f35f0_517-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_518/0 -s single_fast5-output-FAN06711_bf4f35f0_518-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_519/0 -s single_fast5-output-FAN06711_bf4f35f0_519-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_51/0 -s single_fast5-output-FAN06711_bf4f35f0_51-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_520/0 -s single_fast5-output-FAN06711_bf4f35f0_520-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_521/0 -s single_fast5-output-FAN06711_bf4f35f0_521-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_522/0 -s single_fast5-output-FAN06711_bf4f35f0_522-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_523/0 -s single_fast5-output-FAN06711_bf4f35f0_523-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_524/0 -s single_fast5-output-FAN06711_bf4f35f0_524-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_525/0 -s single_fast5-output-FAN06711_bf4f35f0_525-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_526/0 -s single_fast5-output-FAN06711_bf4f35f0_526-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_527/0 -s single_fast5-output-FAN06711_bf4f35f0_527-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_528/0 -s single_fast5-output-FAN06711_bf4f35f0_528-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_529/0 -s single_fast5-output-FAN06711_bf4f35f0_529-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_52/0 -s single_fast5-output-FAN06711_bf4f35f0_52-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_530/0 -s single_fast5-output-FAN06711_bf4f35f0_530-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_531/0 -s single_fast5-output-FAN06711_bf4f35f0_531-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_532/0 -s single_fast5-output-FAN06711_bf4f35f0_532-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_533/0 -s single_fast5-output-FAN06711_bf4f35f0_533-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_534/0 -s single_fast5-output-FAN06711_bf4f35f0_534-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_535/0 -s single_fast5-output-FAN06711_bf4f35f0_535-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_536/0 -s single_fast5-output-FAN06711_bf4f35f0_536-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_537/0 -s single_fast5-output-FAN06711_bf4f35f0_537-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_538/0 -s single_fast5-output-FAN06711_bf4f35f0_538-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_539/0 -s single_fast5-output-FAN06711_bf4f35f0_539-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_53/0 -s single_fast5-output-FAN06711_bf4f35f0_53-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_540/0 -s single_fast5-output-FAN06711_bf4f35f0_540-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_541/0 -s single_fast5-output-FAN06711_bf4f35f0_541-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_542/0 -s single_fast5-output-FAN06711_bf4f35f0_542-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_543/0 -s single_fast5-output-FAN06711_bf4f35f0_543-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_544/0 -s single_fast5-output-FAN06711_bf4f35f0_544-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_545/0 -s single_fast5-output-FAN06711_bf4f35f0_545-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_546/0 -s single_fast5-output-FAN06711_bf4f35f0_546-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_547/0 -s single_fast5-output-FAN06711_bf4f35f0_547-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_548/0 -s single_fast5-output-FAN06711_bf4f35f0_548-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_549/0 -s single_fast5-output-FAN06711_bf4f35f0_549-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_54/0 -s single_fast5-output-FAN06711_bf4f35f0_54-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_550/0 -s single_fast5-output-FAN06711_bf4f35f0_550-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_551/0 -s single_fast5-output-FAN06711_bf4f35f0_551-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_552/0 -s single_fast5-output-FAN06711_bf4f35f0_552-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_553/0 -s single_fast5-output-FAN06711_bf4f35f0_553-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_554/0 -s single_fast5-output-FAN06711_bf4f35f0_554-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_555/0 -s single_fast5-output-FAN06711_bf4f35f0_555-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_556/0 -s single_fast5-output-FAN06711_bf4f35f0_556-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_557/0 -s single_fast5-output-FAN06711_bf4f35f0_557-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_558/0 -s single_fast5-output-FAN06711_bf4f35f0_558-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_559/0 -s single_fast5-output-FAN06711_bf4f35f0_559-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_55/0 -s single_fast5-output-FAN06711_bf4f35f0_55-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_560/0 -s single_fast5-output-FAN06711_bf4f35f0_560-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_561/0 -s single_fast5-output-FAN06711_bf4f35f0_561-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_562/0 -s single_fast5-output-FAN06711_bf4f35f0_562-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_563/0 -s single_fast5-output-FAN06711_bf4f35f0_563-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_564/0 -s single_fast5-output-FAN06711_bf4f35f0_564-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_565/0 -s single_fast5-output-FAN06711_bf4f35f0_565-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_566/0 -s single_fast5-output-FAN06711_bf4f35f0_566-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_567/0 -s single_fast5-output-FAN06711_bf4f35f0_567-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_568/0 -s single_fast5-output-FAN06711_bf4f35f0_568-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_569/0 -s single_fast5-output-FAN06711_bf4f35f0_569-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_56/0 -s single_fast5-output-FAN06711_bf4f35f0_56-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_570/0 -s single_fast5-output-FAN06711_bf4f35f0_570-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_571/0 -s single_fast5-output-FAN06711_bf4f35f0_571-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_572/0 -s single_fast5-output-FAN06711_bf4f35f0_572-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_573/0 -s single_fast5-output-FAN06711_bf4f35f0_573-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_574/0 -s single_fast5-output-FAN06711_bf4f35f0_574-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_575/0 -s single_fast5-output-FAN06711_bf4f35f0_575-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_576/0 -s single_fast5-output-FAN06711_bf4f35f0_576-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_577/0 -s single_fast5-output-FAN06711_bf4f35f0_577-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_578/0 -s single_fast5-output-FAN06711_bf4f35f0_578-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_579/0 -s single_fast5-output-FAN06711_bf4f35f0_579-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_57/0 -s single_fast5-output-FAN06711_bf4f35f0_57-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_580/0 -s single_fast5-output-FAN06711_bf4f35f0_580-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_581/0 -s single_fast5-output-FAN06711_bf4f35f0_581-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_582/0 -s single_fast5-output-FAN06711_bf4f35f0_582-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_583/0 -s single_fast5-output-FAN06711_bf4f35f0_583-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_584/0 -s single_fast5-output-FAN06711_bf4f35f0_584-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_585/0 -s single_fast5-output-FAN06711_bf4f35f0_585-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_586/0 -s single_fast5-output-FAN06711_bf4f35f0_586-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_587/0 -s single_fast5-output-FAN06711_bf4f35f0_587-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_588/0 -s single_fast5-output-FAN06711_bf4f35f0_588-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_589/0 -s single_fast5-output-FAN06711_bf4f35f0_589-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_58/0 -s single_fast5-output-FAN06711_bf4f35f0_58-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_590/0 -s single_fast5-output-FAN06711_bf4f35f0_590-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_591/0 -s single_fast5-output-FAN06711_bf4f35f0_591-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_592/0 -s single_fast5-output-FAN06711_bf4f35f0_592-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_593/0 -s single_fast5-output-FAN06711_bf4f35f0_593-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_594/0 -s single_fast5-output-FAN06711_bf4f35f0_594-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_595/0 -s single_fast5-output-FAN06711_bf4f35f0_595-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_596/0 -s single_fast5-output-FAN06711_bf4f35f0_596-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_597/0 -s single_fast5-output-FAN06711_bf4f35f0_597-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_598/0 -s single_fast5-output-FAN06711_bf4f35f0_598-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_599/0 -s single_fast5-output-FAN06711_bf4f35f0_599-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_59/0 -s single_fast5-output-FAN06711_bf4f35f0_59-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_5/0 -s single_fast5-output-FAN06711_bf4f35f0_5-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_600/0 -s single_fast5-output-FAN06711_bf4f35f0_600-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_601/0 -s single_fast5-output-FAN06711_bf4f35f0_601-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_602/0 -s single_fast5-output-FAN06711_bf4f35f0_602-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_603/0 -s single_fast5-output-FAN06711_bf4f35f0_603-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_604/0 -s single_fast5-output-FAN06711_bf4f35f0_604-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_605/0 -s single_fast5-output-FAN06711_bf4f35f0_605-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_606/0 -s single_fast5-output-FAN06711_bf4f35f0_606-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_607/0 -s single_fast5-output-FAN06711_bf4f35f0_607-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_608/0 -s single_fast5-output-FAN06711_bf4f35f0_608-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_609/0 -s single_fast5-output-FAN06711_bf4f35f0_609-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_60/0 -s single_fast5-output-FAN06711_bf4f35f0_60-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_610/0 -s single_fast5-output-FAN06711_bf4f35f0_610-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_611/0 -s single_fast5-output-FAN06711_bf4f35f0_611-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_612/0 -s single_fast5-output-FAN06711_bf4f35f0_612-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_613/0 -s single_fast5-output-FAN06711_bf4f35f0_613-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_614/0 -s single_fast5-output-FAN06711_bf4f35f0_614-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_615/0 -s single_fast5-output-FAN06711_bf4f35f0_615-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_616/0 -s single_fast5-output-FAN06711_bf4f35f0_616-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_617/0 -s single_fast5-output-FAN06711_bf4f35f0_617-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_618/0 -s single_fast5-output-FAN06711_bf4f35f0_618-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_619/0 -s single_fast5-output-FAN06711_bf4f35f0_619-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_61/0 -s single_fast5-output-FAN06711_bf4f35f0_61-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_620/0 -s single_fast5-output-FAN06711_bf4f35f0_620-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_621/0 -s single_fast5-output-FAN06711_bf4f35f0_621-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_622/0 -s single_fast5-output-FAN06711_bf4f35f0_622-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_623/0 -s single_fast5-output-FAN06711_bf4f35f0_623-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_624/0 -s single_fast5-output-FAN06711_bf4f35f0_624-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_625/0 -s single_fast5-output-FAN06711_bf4f35f0_625-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_626/0 -s single_fast5-output-FAN06711_bf4f35f0_626-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_627/0 -s single_fast5-output-FAN06711_bf4f35f0_627-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_628/0 -s single_fast5-output-FAN06711_bf4f35f0_628-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_629/0 -s single_fast5-output-FAN06711_bf4f35f0_629-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_62/0 -s single_fast5-output-FAN06711_bf4f35f0_62-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_630/0 -s single_fast5-output-FAN06711_bf4f35f0_630-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_631/0 -s single_fast5-output-FAN06711_bf4f35f0_631-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_632/0 -s single_fast5-output-FAN06711_bf4f35f0_632-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_633/0 -s single_fast5-output-FAN06711_bf4f35f0_633-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_634/0 -s single_fast5-output-FAN06711_bf4f35f0_634-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_635/0 -s single_fast5-output-FAN06711_bf4f35f0_635-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_636/0 -s single_fast5-output-FAN06711_bf4f35f0_636-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_637/0 -s single_fast5-output-FAN06711_bf4f35f0_637-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_638/0 -s single_fast5-output-FAN06711_bf4f35f0_638-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_639/0 -s single_fast5-output-FAN06711_bf4f35f0_639-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_63/0 -s single_fast5-output-FAN06711_bf4f35f0_63-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_640/0 -s single_fast5-output-FAN06711_bf4f35f0_640-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_641/0 -s single_fast5-output-FAN06711_bf4f35f0_641-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_642/0 -s single_fast5-output-FAN06711_bf4f35f0_642-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_643/0 -s single_fast5-output-FAN06711_bf4f35f0_643-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_644/0 -s single_fast5-output-FAN06711_bf4f35f0_644-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_645/0 -s single_fast5-output-FAN06711_bf4f35f0_645-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_646/0 -s single_fast5-output-FAN06711_bf4f35f0_646-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_647/0 -s single_fast5-output-FAN06711_bf4f35f0_647-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_648/0 -s single_fast5-output-FAN06711_bf4f35f0_648-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_649/0 -s single_fast5-output-FAN06711_bf4f35f0_649-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_64/0 -s single_fast5-output-FAN06711_bf4f35f0_64-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_650/0 -s single_fast5-output-FAN06711_bf4f35f0_650-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_651/0 -s single_fast5-output-FAN06711_bf4f35f0_651-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_652/0 -s single_fast5-output-FAN06711_bf4f35f0_652-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_653/0 -s single_fast5-output-FAN06711_bf4f35f0_653-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_654/0 -s single_fast5-output-FAN06711_bf4f35f0_654-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_655/0 -s single_fast5-output-FAN06711_bf4f35f0_655-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_656/0 -s single_fast5-output-FAN06711_bf4f35f0_656-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_657/0 -s single_fast5-output-FAN06711_bf4f35f0_657-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_658/0 -s single_fast5-output-FAN06711_bf4f35f0_658-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_659/0 -s single_fast5-output-FAN06711_bf4f35f0_659-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_65/0 -s single_fast5-output-FAN06711_bf4f35f0_65-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_660/0 -s single_fast5-output-FAN06711_bf4f35f0_660-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_661/0 -s single_fast5-output-FAN06711_bf4f35f0_661-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_662/0 -s single_fast5-output-FAN06711_bf4f35f0_662-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_663/0 -s single_fast5-output-FAN06711_bf4f35f0_663-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_664/0 -s single_fast5-output-FAN06711_bf4f35f0_664-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_665/0 -s single_fast5-output-FAN06711_bf4f35f0_665-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_666/0 -s single_fast5-output-FAN06711_bf4f35f0_666-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_667/0 -s single_fast5-output-FAN06711_bf4f35f0_667-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_668/0 -s single_fast5-output-FAN06711_bf4f35f0_668-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_669/0 -s single_fast5-output-FAN06711_bf4f35f0_669-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_66/0 -s single_fast5-output-FAN06711_bf4f35f0_66-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_670/0 -s single_fast5-output-FAN06711_bf4f35f0_670-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_671/0 -s single_fast5-output-FAN06711_bf4f35f0_671-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_672/0 -s single_fast5-output-FAN06711_bf4f35f0_672-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_673/0 -s single_fast5-output-FAN06711_bf4f35f0_673-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_674/0 -s single_fast5-output-FAN06711_bf4f35f0_674-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_675/0 -s single_fast5-output-FAN06711_bf4f35f0_675-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_676/0 -s single_fast5-output-FAN06711_bf4f35f0_676-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_677/0 -s single_fast5-output-FAN06711_bf4f35f0_677-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_678/0 -s single_fast5-output-FAN06711_bf4f35f0_678-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_679/0 -s single_fast5-output-FAN06711_bf4f35f0_679-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_67/0 -s single_fast5-output-FAN06711_bf4f35f0_67-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_680/0 -s single_fast5-output-FAN06711_bf4f35f0_680-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_681/0 -s single_fast5-output-FAN06711_bf4f35f0_681-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_682/0 -s single_fast5-output-FAN06711_bf4f35f0_682-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_683/0 -s single_fast5-output-FAN06711_bf4f35f0_683-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_684/0 -s single_fast5-output-FAN06711_bf4f35f0_684-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_685/0 -s single_fast5-output-FAN06711_bf4f35f0_685-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_686/0 -s single_fast5-output-FAN06711_bf4f35f0_686-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_687/0 -s single_fast5-output-FAN06711_bf4f35f0_687-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_688/0 -s single_fast5-output-FAN06711_bf4f35f0_688-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_689/0 -s single_fast5-output-FAN06711_bf4f35f0_689-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_68/0 -s single_fast5-output-FAN06711_bf4f35f0_68-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_690/0 -s single_fast5-output-FAN06711_bf4f35f0_690-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_691/0 -s single_fast5-output-FAN06711_bf4f35f0_691-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_692/0 -s single_fast5-output-FAN06711_bf4f35f0_692-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_693/0 -s single_fast5-output-FAN06711_bf4f35f0_693-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_694/0 -s single_fast5-output-FAN06711_bf4f35f0_694-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_695/0 -s single_fast5-output-FAN06711_bf4f35f0_695-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_696/0 -s single_fast5-output-FAN06711_bf4f35f0_696-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_697/0 -s single_fast5-output-FAN06711_bf4f35f0_697-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_698/0 -s single_fast5-output-FAN06711_bf4f35f0_698-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_699/0 -s single_fast5-output-FAN06711_bf4f35f0_699-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_69/0 -s single_fast5-output-FAN06711_bf4f35f0_69-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_6/0 -s single_fast5-output-FAN06711_bf4f35f0_6-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_700/0 -s single_fast5-output-FAN06711_bf4f35f0_700-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_701/0 -s single_fast5-output-FAN06711_bf4f35f0_701-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_702/0 -s single_fast5-output-FAN06711_bf4f35f0_702-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_703/0 -s single_fast5-output-FAN06711_bf4f35f0_703-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_704/0 -s single_fast5-output-FAN06711_bf4f35f0_704-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_705/0 -s single_fast5-output-FAN06711_bf4f35f0_705-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_706/0 -s single_fast5-output-FAN06711_bf4f35f0_706-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_70/0 -s single_fast5-output-FAN06711_bf4f35f0_70-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_71/0 -s single_fast5-output-FAN06711_bf4f35f0_71-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_72/0 -s single_fast5-output-FAN06711_bf4f35f0_72-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_73/0 -s single_fast5-output-FAN06711_bf4f35f0_73-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_74/0 -s single_fast5-output-FAN06711_bf4f35f0_74-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_75/0 -s single_fast5-output-FAN06711_bf4f35f0_75-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_76/0 -s single_fast5-output-FAN06711_bf4f35f0_76-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_77/0 -s single_fast5-output-FAN06711_bf4f35f0_77-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_78/0 -s single_fast5-output-FAN06711_bf4f35f0_78-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_79/0 -s single_fast5-output-FAN06711_bf4f35f0_79-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_7/0 -s single_fast5-output-FAN06711_bf4f35f0_7-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_80/0 -s single_fast5-output-FAN06711_bf4f35f0_80-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_81/0 -s single_fast5-output-FAN06711_bf4f35f0_81-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_82/0 -s single_fast5-output-FAN06711_bf4f35f0_82-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_83/0 -s single_fast5-output-FAN06711_bf4f35f0_83-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_84/0 -s single_fast5-output-FAN06711_bf4f35f0_84-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_85/0 -s single_fast5-output-FAN06711_bf4f35f0_85-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_86/0 -s single_fast5-output-FAN06711_bf4f35f0_86-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_87/0 -s single_fast5-output-FAN06711_bf4f35f0_87-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_88/0 -s single_fast5-output-FAN06711_bf4f35f0_88-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_89/0 -s single_fast5-output-FAN06711_bf4f35f0_89-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_8/0 -s single_fast5-output-FAN06711_bf4f35f0_8-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_90/0 -s single_fast5-output-FAN06711_bf4f35f0_90-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_91/0 -s single_fast5-output-FAN06711_bf4f35f0_91-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_92/0 -s single_fast5-output-FAN06711_bf4f35f0_92-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_93/0 -s single_fast5-output-FAN06711_bf4f35f0_93-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_94/0 -s single_fast5-output-FAN06711_bf4f35f0_94-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_95/0 -s single_fast5-output-FAN06711_bf4f35f0_95-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_96/0 -s single_fast5-output-FAN06711_bf4f35f0_96-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_97/0 -s single_fast5-output-FAN06711_bf4f35f0_97-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_98/0 -s single_fast5-output-FAN06711_bf4f35f0_98-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_99/0 -s single_fast5-output-FAN06711_bf4f35f0_99-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
/oak/stanford/groups/akundaje/marinovg/programs/ont-guppy-cpu_6.4.6_linux64/bin/guppy_basecaller -i single_fast5-output-FAN06711_bf4f35f0_9/0 -s single_fast5-output-FAN06711_bf4f35f0_9-guppy --flowcell FLO-MIN106 --kit SQK-LSK109 --cpu_threads_per_caller 20 --trim_adapters --detect_adapter
 