python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_0/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_0 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_100/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_100 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_101/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_101 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_102/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_102 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_103/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_103 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_104/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_104 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_105/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_105 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_106/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_106 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_107/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_107 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_108/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_108 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_109/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_109 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_10/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_10 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_110/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_110 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_111/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_111 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_112/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_112 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_113/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_113 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_114/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_114 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_115/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_115 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_116/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_116 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_117/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_117 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_118/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_118 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_119/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_119 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_11/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_11 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_120/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_120 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_121/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_121 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_122/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_122 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_123/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_123 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_124/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_124 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_125/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_125 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_126/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_126 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_127/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_127 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_128/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_128 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_129/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_129 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_12/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_12 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_130/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_130 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_131/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_131 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_132/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_132 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_133/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_133 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_134/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_134 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_135/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_135 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_136/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_136 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_137/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_137 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_138/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_138 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_139/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_139 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_13/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_13 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_140/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_140 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_141/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_141 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_142/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_142 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_143/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_143 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_144/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_144 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_145/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_145 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_146/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_146 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_147/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_147 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_148/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_148 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_149/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_149 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_14/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_14 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_150/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_150 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_151/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_151 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_152/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_152 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_153/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_153 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_154/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_154 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_155/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_155 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_156/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_156 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_157/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_157 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_158/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_158 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_159/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_159 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_15/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_15 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_160/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_160 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_161/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_161 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_162/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_162 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_163/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_163 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_164/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_164 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_165/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_165 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_166/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_166 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_167/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_167 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_168/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_168 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_169/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_169 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_16/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_16 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_170/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_170 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_171/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_171 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_172/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_172 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_173/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_173 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_174/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_174 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_175/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_175 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_176/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_176 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_177/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_177 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_178/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_178 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_179/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_179 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_17/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_17 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_180/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_180 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_181/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_181 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_182/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_182 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_183/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_183 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_184/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_184 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_185/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_185 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_186/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_186 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_187/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_187 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_188/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_188 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_189/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_189 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_18/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_18 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_190/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_190 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_191/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_191 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_192/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_192 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_193/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_193 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_194/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_194 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_195/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_195 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_196/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_196 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_197/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_197 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_198/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_198 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_199/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_199 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_19/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_19 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_1/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_1 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_200/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_200 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_201/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_201 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_202/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_202 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_203/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_203 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_204/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_204 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_205/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_205 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_206/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_206 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_207/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_207 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_208/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_208 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_209/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_209 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_20/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_20 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_210/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_210 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_211/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_211 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_212/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_212 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_213/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_213 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_214/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_214 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_215/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_215 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_216/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_216 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_217/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_217 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_218/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_218 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_219/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_219 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_21/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_21 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_220/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_220 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_221/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_221 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_222/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_222 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_223/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_223 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_224/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_224 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_225/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_225 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_226/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_226 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_227/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_227 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_228/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_228 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_229/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_229 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_22/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_22 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_230/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_230 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_231/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_231 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_232/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_232 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_233/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_233 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_234/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_234 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_235/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_235 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_236/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_236 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_237/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_237 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_238/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_238 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_239/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_239 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_23/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_23 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_240/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_240 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_241/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_241 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_242/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_242 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_243/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_243 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_244/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_244 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_245/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_245 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_246/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_246 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_247/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_247 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_248/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_248 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_249/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_249 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_24/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_24 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_250/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_250 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_251/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_251 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_252/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_252 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_253/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_253 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_254/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_254 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_255/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_255 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_256/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_256 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_257/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_257 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_258/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_258 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_259/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_259 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_25/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_25 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_260/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_260 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_261/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_261 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_262/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_262 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_263/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_263 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_264/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_264 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_265/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_265 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_266/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_266 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_267/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_267 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_268/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_268 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_269/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_269 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_26/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_26 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_270/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_270 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_271/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_271 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_272/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_272 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_273/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_273 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_274/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_274 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_275/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_275 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_276/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_276 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_277/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_277 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_278/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_278 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_279/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_279 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_27/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_27 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_280/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_280 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_281/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_281 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_282/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_282 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_283/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_283 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_284/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_284 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_285/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_285 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_286/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_286 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_287/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_287 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_288/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_288 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_289/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_289 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_28/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_28 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_290/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_290 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_291/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_291 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_292/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_292 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_293/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_293 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_294/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_294 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_295/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_295 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_296/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_296 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_297/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_297 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_298/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_298 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_299/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_299 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_29/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_29 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_2/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_2 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_300/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_300 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_301/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_301 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_302/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_302 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_303/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_303 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_304/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_304 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_305/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_305 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_306/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_306 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_307/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_307 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_308/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_308 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_309/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_309 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_30/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_30 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_310/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_310 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_311/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_311 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_312/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_312 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_313/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_313 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_314/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_314 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_315/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_315 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_316/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_316 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_317/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_317 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_318/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_318 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_319/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_319 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_31/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_31 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_320/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_320 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_321/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_321 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_322/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_322 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_323/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_323 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_324/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_324 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_325/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_325 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_326/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_326 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_327/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_327 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_328/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_328 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_329/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_329 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_32/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_32 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_330/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_330 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_331/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_331 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_332/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_332 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_333/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_333 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_334/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_334 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_335/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_335 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_336/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_336 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_337/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_337 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_338/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_338 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_339/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_339 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_33/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_33 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_340/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_340 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_341/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_341 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_342/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_342 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_343/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_343 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_344/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_344 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_345/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_345 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_346/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_346 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_347/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_347 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_348/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_348 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_349/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_349 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_34/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_34 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_350/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_350 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_351/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_351 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_352/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_352 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_353/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_353 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_354/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_354 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_355/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_355 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_356/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_356 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_357/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_357 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_358/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_358 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_359/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_359 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_35/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_35 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_360/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_360 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_361/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_361 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_362/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_362 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_363/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_363 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_364/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_364 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_365/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_365 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_366/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_366 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_367/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_367 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_368/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_368 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_369/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_369 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_36/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_36 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_370/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_370 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_371/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_371 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_372/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_372 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_373/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_373 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_374/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_374 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_375/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_375 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_376/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_376 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_377/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_377 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_378/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_378 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_379/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_379 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_37/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_37 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_380/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_380 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_381/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_381 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_382/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_382 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_383/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_383 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_384/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_384 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_385/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_385 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_386/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_386 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_387/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_387 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_388/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_388 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_389/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_389 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_38/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_38 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_390/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_390 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_391/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_391 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_392/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_392 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_393/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_393 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_394/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_394 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_395/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_395 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_396/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_396 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_397/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_397 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_398/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_398 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_399/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_399 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_39/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_39 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_3/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_3 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_400/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_400 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_401/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_401 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_402/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_402 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_403/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_403 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_404/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_404 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_405/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_405 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_406/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_406 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_407/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_407 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_408/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_408 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_409/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_409 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_40/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_40 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_410/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_410 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_411/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_411 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_412/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_412 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_413/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_413 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_414/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_414 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_415/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_415 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_416/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_416 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_417/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_417 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_418/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_418 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_419/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_419 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_41/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_41 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_420/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_420 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_421/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_421 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_422/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_422 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_423/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_423 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_424/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_424 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_425/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_425 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_426/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_426 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_427/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_427 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_428/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_428 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_429/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_429 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_42/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_42 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_430/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_430 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_431/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_431 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_432/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_432 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_433/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_433 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_434/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_434 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_435/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_435 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_436/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_436 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_437/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_437 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_438/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_438 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_439/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_439 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_43/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_43 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_440/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_440 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_441/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_441 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_442/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_442 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_443/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_443 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_444/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_444 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_445/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_445 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_446/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_446 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_447/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_447 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_448/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_448 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_449/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_449 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_44/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_44 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_450/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_450 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_451/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_451 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_452/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_452 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_453/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_453 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_454/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_454 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_455/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_455 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_456/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_456 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_457/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_457 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_458/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_458 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_459/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_459 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_45/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_45 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_460/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_460 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_461/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_461 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_462/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_462 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_463/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_463 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_464/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_464 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_465/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_465 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_466/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_466 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_467/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_467 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_468/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_468 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_469/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_469 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_46/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_46 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_470/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_470 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_471/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_471 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_472/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_472 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_473/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_473 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_474/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_474 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_475/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_475 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_476/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_476 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_477/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_477 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_478/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_478 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_479/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_479 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_47/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_47 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_480/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_480 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_481/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_481 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_482/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_482 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_483/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_483 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_484/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_484 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_485/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_485 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_486/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_486 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_487/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_487 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_488/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_488 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_489/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_489 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_48/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_48 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_490/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_490 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_491/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_491 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_492/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_492 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_493/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_493 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_494/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_494 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_495/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_495 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_496/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_496 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_497/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_497 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_498/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_498 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_499/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_499 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_49/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_49 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_4/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_4 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_500/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_500 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_501/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_501 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_502/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_502 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_503/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_503 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_504/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_504 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_505/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_505 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_506/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_506 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_507/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_507 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_508/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_508 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_509/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_509 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_50/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_50 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_510/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_510 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_511/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_511 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_512/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_512 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_513/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_513 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_514/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_514 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_515/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_515 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_516/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_516 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_517/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_517 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_518/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_518 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_519/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_519 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_51/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_51 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_520/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_520 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_521/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_521 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_522/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_522 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_523/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_523 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_524/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_524 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_525/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_525 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_526/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_526 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_527/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_527 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_528/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_528 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_529/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_529 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_52/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_52 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_530/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_530 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_531/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_531 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_532/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_532 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_533/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_533 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_534/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_534 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_535/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_535 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_536/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_536 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_537/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_537 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_538/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_538 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_539/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_539 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_53/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_53 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_540/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_540 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_541/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_541 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_542/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_542 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_543/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_543 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_544/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_544 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_545/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_545 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_546/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_546 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_547/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_547 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_548/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_548 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_549/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_549 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_54/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_54 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_550/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_550 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_551/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_551 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_552/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_552 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_553/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_553 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_554/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_554 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_555/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_555 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_556/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_556 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_557/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_557 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_558/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_558 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_559/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_559 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_55/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_55 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_560/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_560 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_561/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_561 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_562/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_562 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_563/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_563 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_564/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_564 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_565/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_565 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_566/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_566 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_567/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_567 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_568/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_568 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_569/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_569 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_56/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_56 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_570/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_570 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_571/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_571 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_572/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_572 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_573/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_573 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_574/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_574 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_575/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_575 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_576/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_576 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_577/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_577 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_578/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_578 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_579/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_579 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_57/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_57 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_580/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_580 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_581/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_581 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_582/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_582 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_583/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_583 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_584/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_584 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_585/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_585 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_586/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_586 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_587/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_587 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_588/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_588 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_589/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_589 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_58/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_58 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_590/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_590 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_591/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_591 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_592/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_592 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_593/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_593 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_594/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_594 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_595/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_595 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_596/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_596 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_597/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_597 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_598/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_598 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_599/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_599 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_59/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_59 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_5/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_5 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_600/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_600 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_601/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_601 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_602/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_602 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_603/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_603 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_604/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_604 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_605/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_605 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_606/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_606 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_607/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_607 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_608/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_608 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_609/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_609 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_60/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_60 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_610/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_610 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_611/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_611 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_612/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_612 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_613/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_613 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_614/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_614 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_615/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_615 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_616/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_616 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_617/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_617 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_618/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_618 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_619/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_619 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_61/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_61 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_620/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_620 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_621/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_621 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_622/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_622 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_623/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_623 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_624/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_624 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_625/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_625 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_626/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_626 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_627/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_627 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_628/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_628 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_629/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_629 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_62/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_62 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_630/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_630 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_631/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_631 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_632/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_632 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_633/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_633 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_634/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_634 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_635/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_635 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_636/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_636 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_637/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_637 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_638/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_638 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_639/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_639 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_63/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_63 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_640/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_640 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_641/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_641 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_642/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_642 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_643/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_643 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_644/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_644 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_645/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_645 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_646/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_646 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_647/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_647 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_648/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_648 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_649/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_649 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_64/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_64 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_650/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_650 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_651/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_651 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_652/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_652 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_653/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_653 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_654/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_654 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_655/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_655 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_656/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_656 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_657/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_657 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_658/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_658 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_659/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_659 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_65/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_65 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_660/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_660 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_661/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_661 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_662/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_662 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_663/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_663 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_664/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_664 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_665/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_665 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_666/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_666 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_667/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_667 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_668/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_668 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_669/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_669 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_66/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_66 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_670/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_670 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_671/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_671 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_672/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_672 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_673/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_673 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_674/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_674 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_675/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_675 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_676/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_676 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_677/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_677 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_678/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_678 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_679/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_679 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_67/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_67 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_680/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_680 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_681/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_681 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_682/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_682 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_683/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_683 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_684/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_684 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_685/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_685 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_686/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_686 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_687/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_687 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_688/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_688 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_689/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_689 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_68/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_68 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_690/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_690 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_691/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_691 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_692/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_692 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_693/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_693 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_694/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_694 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_695/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_695 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_696/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_696 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_697/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_697 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_698/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_698 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_699/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_699 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_69/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_69 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_6/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_6 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_700/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_700 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_701/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_701 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_702/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_702 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_703/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_703 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_704/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_704 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_705/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_705 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_706/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_706 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_707/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_707 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_708/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_708 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_709/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_709 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_70/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_70 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_710/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_710 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_711/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_711 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_712/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_712 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_713/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_713 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_714/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_714 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_715/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_715 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_716/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_716 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_717/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_717 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_718/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_718 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_719/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_719 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_71/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_71 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_720/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_720 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_721/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_721 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_722/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_722 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_723/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_723 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_724/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_724 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_725/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_725 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_726/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_726 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_727/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_727 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_728/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_728 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_729/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_729 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_72/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_72 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_730/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_730 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_731/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_731 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_732/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_732 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_733/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_733 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_734/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_734 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_735/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_735 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_736/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_736 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_737/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_737 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_738/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_738 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_739/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_739 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_73/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_73 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_740/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_740 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_741/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_741 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_742/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_742 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_743/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_743 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_744/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_744 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_745/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_745 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_746/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_746 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_747/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_747 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_748/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_748 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_749/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_749 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_74/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_74 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_750/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_750 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_751/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_751 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_752/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_752 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_753/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_753 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_754/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_754 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_755/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_755 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_756/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_756 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_757/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_757 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_758/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_758 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_759/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_759 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_75/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_75 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_760/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_760 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_761/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_761 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_762/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_762 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_763/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_763 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_764/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_764 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_765/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_765 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_766/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_766 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_767/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_767 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_768/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_768 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_769/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_769 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_76/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_76 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_770/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_770 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_771/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_771 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_772/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_772 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_773/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_773 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_774/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_774 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_775/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_775 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_776/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_776 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_777/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_777 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_778/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_778 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_779/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_779 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_77/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_77 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_780/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_780 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_781/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_781 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_782/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_782 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_783/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_783 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_784/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_784 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_785/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_785 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_786/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_786 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_787/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_787 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_788/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_788 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_789/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_789 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_78/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_78 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_790/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_790 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_791/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_791 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_792/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_792 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_793/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_793 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_794/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_794 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_795/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_795 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_796/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_796 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_797/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_797 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_798/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_798 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_799/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_799 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_79/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_79 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_7/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_7 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_800/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_800 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_801/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_801 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_802/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_802 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_803/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_803 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_804/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_804 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_805/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_805 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_806/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_806 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_807/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_807 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_808/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_808 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_809/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_809 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_80/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_80 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_810/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_810 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_811/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_811 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_812/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_812 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_813/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_813 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_814/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_814 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_815/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_815 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_816/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_816 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_817/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_817 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_818/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_818 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_819/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_819 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_81/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_81 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_820/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_820 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_821/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_821 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_822/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_822 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_823/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_823 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_824/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_824 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_825/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_825 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_826/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_826 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_827/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_827 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_828/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_828 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_829/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_829 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_82/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_82 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_830/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_830 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_831/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_831 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_832/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_832 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_833/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_833 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_834/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_834 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_835/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_835 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_836/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_836 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_837/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_837 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_838/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_838 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_839/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_839 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_83/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_83 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_840/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_840 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_841/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_841 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_842/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_842 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_843/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_843 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_844/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_844 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_845/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_845 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_846/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_846 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_847/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_847 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_848/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_848 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_849/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_849 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_84/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_84 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_850/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_850 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_851/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_851 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_852/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_852 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_853/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_853 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_854/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_854 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_855/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_855 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_856/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_856 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_857/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_857 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_858/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_858 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_859/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_859 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_85/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_85 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_860/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_860 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_861/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_861 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_862/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_862 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_863/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_863 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_864/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_864 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_865/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_865 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_866/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_866 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_867/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_867 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_868/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_868 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_869/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_869 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_86/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_86 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_870/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_870 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_871/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_871 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_872/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_872 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_873/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_873 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_874/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_874 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_875/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_875 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_876/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_876 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_877/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_877 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_878/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_878 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_879/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_879 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_87/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_87 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_880/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_880 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_881/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_881 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_882/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_882 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_883/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_883 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_884/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_884 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_885/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_885 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_886/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_886 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_887/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_887 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_888/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_888 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_889/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_889 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_88/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_88 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_890/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_890 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_891/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_891 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_892/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_892 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_893/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_893 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_894/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_894 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_895/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_895 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_896/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_896 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_897/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_897 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_898/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_898 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_899/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_899 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_89/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_89 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_8/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_8 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_900/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_900 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_901/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_901 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_902/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_902 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_903/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_903 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_904/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_904 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_905/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_905 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_906/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_906 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_907/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_907 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_908/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_908 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_909/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_909 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_90/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_90 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_910/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_910 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_911/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_911 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_912/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_912 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_913/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_913 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_914/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_914 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_915/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_915 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_916/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_916 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_917/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_917 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_918/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_918 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_919/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_919 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_91/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_91 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_920/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_920 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_921/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_921 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_922/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_922 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_923/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_923 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_924/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_924 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_925/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_925 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_926/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_926 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_927/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_927 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_928/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_928 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_929/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_929 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_92/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_92 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_930/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_930 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_931/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_931 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_932/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_932 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_933/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_933 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_934/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_934 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_935/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_935 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_936/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_936 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_937/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_937 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_938/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_938 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_939/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_939 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_93/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_93 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_940/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_940 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_94/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_94 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_95/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_95 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_96/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_96 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_97/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_97 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_98/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_98 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_99/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_99 -m6A-only -excludeContext CG 1 &
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_9/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/sequence/sacCer3.fa single_fast5-output-FAK47401_7f797bc105e2fb92cbec058104a6b49007168f14_9 -m6A-only -excludeContext CG 1 &