python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_0/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_0.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_10/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_10.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_11/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_11.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_12/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_12.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_13/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_13.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_14/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_14.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_15/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_15.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_16/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_16.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_17/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_17.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_18/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_18.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_19/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_19.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_1/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_1.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_20/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_20.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_21/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_21.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_22/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_22.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_23/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_23.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_24/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_24.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_25/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_25.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_26/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_26.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_27/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_27.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_28/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_28.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_29/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_29.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_2/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_2.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_30/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_30.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_31/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_31.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_32/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_32.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_33/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_33.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_34/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_34.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_35/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_35.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_36/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_36.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_37/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_37.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_38/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_38.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_39/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_39.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_3/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_3.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_40/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_40.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_41/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_41.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_42/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_42.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_43/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_43.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_44/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_44.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_45/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_45.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_46/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_46.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_47/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_47.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_48/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_48.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_49/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_49.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_4/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_4.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_50/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_50.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_51/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_51.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_52/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_52.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_53/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_53.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_54/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_54.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_55/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_55.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_56/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_56.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_57/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_57.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_58/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_58.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_59/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_59.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_5/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_5.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_60/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_60.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_61/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_61.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_62/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_62.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_63/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_63.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_64/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_64.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_65/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_65.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_66/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_66.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_67/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_67.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_68/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_68.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_6/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_6.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_7/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_7.TSV -m6A-only -excludeContext CG 1
python ~/code/bisulfite/TomboSingleReadsExtract-tombo_de_novo-1.5.py single_fast5-output-ans574_e2b62ad8_8/tombo.mods.per_read.tombo.per_read_stats /oak/stanford/groups/akundaje/marinovg/genomes/hg38/sequence/hg38-no-haps.fa single_fast5-output-ans574_e2b62ad8_8.TSV -m6A-only -excludeContext CG 1