## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[07-Homo_sapiens-LNCaP_PrEC-GSE40770-PrEC-GSM1981392.trimgalore.bwameth.hg38.bam] OUTPUT=07-Homo_sapiens-LNCaP_PrEC-GSE40770-PrEC-GSM1981392.trimgalore.bwameth.hg38.dedup.bam METRICS_FILE=07-Homo_sapiens-LNCaP_PrEC-GSE40770-PrEC-GSM1981392.trimgalore.bwameth.hg38.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Jun 21 10:41:16 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
	0	148960990	0	0	2292821	0	0.015392	4789099030

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.969375
3.0	2.909062
4.0	3.81997
5.0	4.702982
6.0	5.558951
7.0	6.388706
8.0	7.193049
9.0	7.972759
10.0	8.72859
11.0	9.461273
12.0	10.171518
13.0	10.860011
14.0	11.527419
15.0	12.174386
16.0	12.801541
17.0	13.409488
18.0	13.998817
19.0	14.570097
20.0	15.123882
21.0	15.660707
22.0	16.181091
23.0	16.685538
24.0	17.174537
25.0	17.648559
26.0	18.108065
27.0	18.553498
28.0	18.985289
29.0	19.403857
30.0	19.809605
31.0	20.202928
32.0	20.584205
33.0	20.953805
34.0	21.312086
35.0	21.659394
36.0	21.996066
37.0	22.322427
38.0	22.638794
39.0	22.945471
40.0	23.242756
41.0	23.530937
42.0	23.810292
43.0	24.081092
44.0	24.343599
45.0	24.598066
46.0	24.84474
47.0	25.083859
48.0	25.315655
49.0	25.540353
50.0	25.758169
51.0	25.969314
52.0	26.173993
53.0	26.372403
54.0	26.564737
55.0	26.751181
56.0	26.931915
57.0	27.107114
58.0	27.276947
59.0	27.441579
60.0	27.601169
61.0	27.755872
62.0	27.905837
63.0	28.051209
64.0	28.192129
65.0	28.328733
66.0	28.461153
67.0	28.589519
68.0	28.713953
69.0	28.834576
70.0	28.951505
71.0	29.064853
72.0	29.174729
73.0	29.281241
74.0	29.384491
75.0	29.484578
76.0	29.581601
77.0	29.675652
78.0	29.766823
79.0	29.855201
80.0	29.940873
81.0	30.023921
82.0	30.104426
83.0	30.182465
84.0	30.258115
85.0	30.331447
86.0	30.402534
87.0	30.471444
88.0	30.538243
89.0	30.602996
90.0	30.665767
91.0	30.726615
92.0	30.785599
93.0	30.842777
94.0	30.898204
95.0	30.951934
96.0	31.004018
97.0	31.054507
98.0	31.103449
99.0	31.150893
100.0	31.196884