## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP_4hr_1-GSM1981397.trimgalore.bwameth.hg38.bam] OUTPUT=07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP_4hr_1-GSM1981397.trimgalore.bwameth.hg38.dedup.bam METRICS_FILE=07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP_4hr_1-GSM1981397.trimgalore.bwameth.hg38.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Jun 21 10:41:16 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
	0	33967596	0	0	1259026	0	0.037066	446816489

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.926796
3.0	2.785748
4.0	3.581821
5.0	4.319619
6.0	5.003407
7.0	5.63714
8.0	6.224481
9.0	6.768827
10.0	7.273324
11.0	7.740891
12.0	8.17423
13.0	8.575847
14.0	8.948064
15.0	9.293034
16.0	9.61275
17.0	9.909063
18.0	10.183684
19.0	10.438202
20.0	10.674088
21.0	10.892706
22.0	11.095321
23.0	11.283104
24.0	11.45714
25.0	11.618436
26.0	11.767925
27.0	11.906471
28.0	12.034874
29.0	12.153878
30.0	12.264171
31.0	12.36639
32.0	12.461125
33.0	12.548926
34.0	12.6303
35.0	12.705717
36.0	12.775613
37.0	12.840392
38.0	12.900429
39.0	12.956072
40.0	13.007641
41.0	13.055435
42.0	13.09973
43.0	13.140783
44.0	13.17883
45.0	13.214093
46.0	13.246774
47.0	13.277062
48.0	13.305134
49.0	13.33115
50.0	13.355262
51.0	13.377609
52.0	13.39832
53.0	13.417515
54.0	13.435305
55.0	13.451792
56.0	13.467073
57.0	13.481235
58.0	13.49436
59.0	13.506524
60.0	13.517798
61.0	13.528247
62.0	13.537931
63.0	13.546906
64.0	13.555224
65.0	13.562933
66.0	13.570077
67.0	13.576699
68.0	13.582836
69.0	13.588524
70.0	13.593795
71.0	13.59868
72.0	13.603208
73.0	13.607405
74.0	13.611294
75.0	13.614898
76.0	13.618239
77.0	13.621335
78.0	13.624204
79.0	13.626864
80.0	13.629328
81.0	13.631613
82.0	13.63373
83.0	13.635692
84.0	13.63751
85.0	13.639195
86.0	13.640757
87.0	13.642205
88.0	13.643547
89.0	13.64479
90.0	13.645943
91.0	13.647011
92.0	13.648
93.0	13.648918
94.0	13.649768
95.0	13.650556
96.0	13.651286
97.0	13.651963
98.0	13.652591
99.0	13.653172
100.0	13.653711