## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP_2hr_2.-GSM1981396.trimgalore.bwameth.hg38.bam] OUTPUT=07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP_2hr_2.-GSM1981396.trimgalore.bwameth.hg38.dedup.bam METRICS_FILE=07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP_2hr_2.-GSM1981396.trimgalore.bwameth.hg38.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Jun 21 10:41:16 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
	0	33916420	0	0	1184740	0	0.034931	474102554

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.930961
3.0	2.797649
4.0	3.604501
5.0	4.355649
6.0	5.054938
7.0	5.705949
8.0	6.312015
9.0	6.876238
10.0	7.401508
11.0	7.890513
12.0	8.345758
13.0	8.769574
14.0	9.164129
15.0	9.531444
16.0	9.873401
17.0	10.191749
18.0	10.488118
19.0	10.764026
20.0	11.020886
21.0	11.260013
22.0	11.48263
23.0	11.689878
24.0	11.882818
25.0	12.062437
26.0	12.229655
27.0	12.385329
28.0	12.530256
29.0	12.665176
30.0	12.790782
31.0	12.907716
32.0	13.016577
33.0	13.117923
34.0	13.212271
35.0	13.300106
36.0	13.381877
37.0	13.458002
38.0	13.528872
39.0	13.594849
40.0	13.656271
41.0	13.713452
42.0	13.766686
43.0	13.816245
44.0	13.862381
45.0	13.905333
46.0	13.94532
47.0	13.982545
48.0	14.017201
49.0	14.049464
50.0	14.0795
51.0	14.107462
52.0	14.133493
53.0	14.157728
54.0	14.180289
55.0	14.201293
56.0	14.220846
57.0	14.23905
58.0	14.255997
59.0	14.271773
60.0	14.286461
61.0	14.300135
62.0	14.312864
63.0	14.324715
64.0	14.335747
65.0	14.346018
66.0	14.35558
67.0	14.364482
68.0	14.372769
69.0	14.380484
70.0	14.387666
71.0	14.394353
72.0	14.400577
73.0	14.406373
74.0	14.411768
75.0	14.41679
76.0	14.421466
77.0	14.425819
78.0	14.429871
79.0	14.433644
80.0	14.437156
81.0	14.440426
82.0	14.44347
83.0	14.446304
84.0	14.448942
85.0	14.451398
86.0	14.453684
87.0	14.455813
88.0	14.457795
89.0	14.459639
90.0	14.461357
91.0	14.462956
92.0	14.464444
93.0	14.46583
94.0	14.46712
95.0	14.468321
96.0	14.469439
97.0	14.47048
98.0	14.471449
99.0	14.472351
100.0	14.473191