## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP_16hr_2-GSM1981400.trimgalore.bwameth.hg38.bam] OUTPUT=07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP_16hr_2-GSM1981400.trimgalore.bwameth.hg38.dedup.bam METRICS_FILE=07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP_16hr_2-GSM1981400.trimgalore.bwameth.hg38.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Jun 21 10:41:16 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
	0	27966422	0	0	787796	0	0.028169	487031449

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.944195
3.0	2.8357
4.0	3.677455
5.0	4.472236
6.0	5.222664
7.0	5.931215
8.0	6.600226
9.0	7.231902
10.0	7.828328
11.0	8.391471
12.0	8.923188
13.0	9.425232
14.0	9.899261
15.0	10.346836
16.0	10.769434
17.0	11.168449
18.0	11.545198
19.0	11.900922
20.0	12.236795
21.0	12.553925
22.0	12.853357
23.0	13.13608
24.0	13.403025
25.0	13.655074
26.0	13.893057
27.0	14.11776
28.0	14.329923
29.0	14.530247
30.0	14.719391
31.0	14.89798
32.0	15.066604
33.0	15.225817
34.0	15.376145
35.0	15.518085
36.0	15.652103
37.0	15.778643
38.0	15.898121
39.0	16.010932
40.0	16.117447
41.0	16.218018
42.0	16.312977
43.0	16.402637
44.0	16.487293
45.0	16.567226
46.0	16.642697
47.0	16.713957
48.0	16.78124
49.0	16.844769
50.0	16.904752
51.0	16.961388
52.0	17.014864
53.0	17.065355
54.0	17.113028
55.0	17.158042
56.0	17.200543
57.0	17.240672
58.0	17.278563
59.0	17.314338
60.0	17.348117
61.0	17.380012
62.0	17.410126
63.0	17.43856
64.0	17.465407
65.0	17.490756
66.0	17.51469
67.0	17.537288
68.0	17.558626
69.0	17.578773
70.0	17.597795
71.0	17.615756
72.0	17.632715
73.0	17.648727
74.0	17.663846
75.0	17.678121
76.0	17.691599
77.0	17.704326
78.0	17.716342
79.0	17.727687
80.0	17.7384
81.0	17.748514
82.0	17.758064
83.0	17.767082
84.0	17.775596
85.0	17.783634
86.0	17.791225
87.0	17.798391
88.0	17.805158
89.0	17.811547
90.0	17.81758
91.0	17.823276
92.0	17.828654
93.0	17.833732
94.0	17.838526
95.0	17.843054
96.0	17.847328
97.0	17.851364
98.0	17.855174
99.0	17.858772
100.0	17.86217