## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP-GSM1981391.trimgalore.bwameth.hg38.bam] OUTPUT=07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP-GSM1981391.trimgalore.bwameth.hg38.dedup.bam METRICS_FILE=07-Homo_sapiens-LNCaP_PrEC-GSE40770-LNCaP-GSM1981391.trimgalore.bwameth.hg38.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Jun 21 10:41:16 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
	0	155263254	0	0	1635291	0	0.010532	7318915154

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.979009
3.0	2.937469
4.0	3.87581
5.0	4.794455
6.0	5.693816
7.0	6.5743
8.0	7.436302
9.0	8.28021
10.0	9.106404
11.0	9.915256
12.0	10.707129
13.0	11.482381
14.0	12.241359
15.0	12.984407
16.0	13.711857
17.0	14.424038
18.0	15.121269
19.0	15.803866
20.0	16.472134
21.0	17.126375
22.0	17.766883
23.0	18.393947
24.0	19.007848
25.0	19.608863
26.0	20.197263
27.0	20.773311
28.0	21.337268
29.0	21.889388
30.0	22.429918
31.0	22.959102
32.0	23.477178
33.0	23.984379
34.0	24.480934
35.0	24.967066
36.0	25.442994
37.0	25.908932
38.0	26.365089
39.0	26.811672
40.0	27.248881
41.0	27.676912
42.0	28.095959
43.0	28.506209
44.0	28.907849
45.0	29.301058
46.0	29.686013
47.0	30.062887
48.0	30.431851
49.0	30.79307
50.0	31.146707
51.0	31.492921
52.0	31.831868
53.0	32.1637
54.0	32.488566
55.0	32.806614
56.0	33.117985
57.0	33.422821
58.0	33.721258
59.0	34.013431
60.0	34.29947
61.0	34.579506
62.0	34.853664
63.0	35.122067
64.0	35.384836
65.0	35.642089
66.0	35.893942
67.0	36.140509
68.0	36.3819
69.0	36.618225
70.0	36.849589
71.0	37.076096
72.0	37.297849
73.0	37.514947
74.0	37.727488
75.0	37.935568
76.0	38.13928
77.0	38.338716
78.0	38.533965
79.0	38.725117
80.0	38.912256
81.0	39.095467
82.0	39.274832
83.0	39.450432
84.0	39.622346
85.0	39.790652
86.0	39.955425
87.0	40.116739
88.0	40.274667
89.0	40.42928
90.0	40.580648
91.0	40.728838
92.0	40.873918
93.0	41.015952
94.0	41.155005
95.0	41.29114
96.0	41.424417
97.0	41.554896
98.0	41.682636
99.0	41.807695
100.0	41.930129