## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[05-Homo_sapiens-RWPE1-GSE118629-RWPE1-GSM3564284.trimgalore.bwameth.hg38.bam] OUTPUT=05-Homo_sapiens-RWPE1-GSE118629-RWPE1-GSM3564284.trimgalore.bwameth.hg38.dedup.bam METRICS_FILE=05-Homo_sapiens-RWPE1-GSE118629-RWPE1-GSM3564284.trimgalore.bwameth.hg38.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Jun 21 10:41:16 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
	0	268828297	0	0	30452158	0	0.113277	1095181445

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.782341
3.0	2.394398
4.0	2.873236
5.0	3.24785
6.0	3.540926
7.0	3.770212
8.0	3.949591
9.0	4.089927
10.0	4.199717
11.0	4.285611
12.0	4.352809
13.0	4.405381
14.0	4.44651
15.0	4.478687
16.0	4.50386
17.0	4.523554
18.0	4.538962
19.0	4.551016
20.0	4.560446
21.0	4.567824
22.0	4.573596
23.0	4.578111
24.0	4.581644
25.0	4.584408
26.0	4.58657
27.0	4.588262
28.0	4.589585
29.0	4.59062
30.0	4.59143
31.0	4.592064
32.0	4.59256
33.0	4.592948
34.0	4.593251
35.0	4.593488
36.0	4.593674
37.0	4.593819
38.0	4.593933
39.0	4.594022
40.0	4.594092
41.0	4.594146
42.0	4.594189
43.0	4.594222
44.0	4.594248
45.0	4.594268
46.0	4.594284
47.0	4.594297
48.0	4.594307
49.0	4.594314
50.0	4.59432
51.0	4.594325
52.0	4.594329
53.0	4.594331
54.0	4.594334
55.0	4.594335
56.0	4.594337
57.0	4.594338
58.0	4.594339
59.0	4.594339
60.0	4.59434
61.0	4.59434
62.0	4.594341
63.0	4.594341
64.0	4.594341
65.0	4.594341
66.0	4.594341
67.0	4.594341
68.0	4.594341
69.0	4.594342
70.0	4.594342
71.0	4.594342
72.0	4.594342
73.0	4.594342
74.0	4.594342
75.0	4.594342
76.0	4.594342
77.0	4.594342
78.0	4.594342
79.0	4.594342
80.0	4.594342
81.0	4.594342
82.0	4.594342
83.0	4.594342
84.0	4.594342
85.0	4.594342
86.0	4.594342
87.0	4.594342
88.0	4.594342
89.0	4.594342
90.0	4.594342
91.0	4.594342
92.0	4.594342
93.0	4.594342
94.0	4.594342
95.0	4.594342
96.0	4.594342
97.0	4.594342
98.0	4.594342
99.0	4.594342
100.0	4.594342