## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[03-Homo_sapiens-HMEC_MCF7_PrEC_PC3-GSE57498-HMEC-GSM1383849.trimgalore.bwameth.hg38.bam] OUTPUT=03-Homo_sapiens-HMEC_MCF7_PrEC_PC3-GSE57498-HMEC-GSM1383849.trimgalore.bwameth.hg38.dedup.bam METRICS_FILE=03-Homo_sapiens-HMEC_MCF7_PrEC_PC3-GSE57498-HMEC-GSM1383849.trimgalore.bwameth.hg38.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Jun 21 10:41:15 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
	0	177037313	0	0	4970783	0	0.028078	3093350367

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.944375
3.0	2.83622
4.0	3.678456
5.0	4.473844
6.0	5.224988
7.0	5.934349
8.0	6.604253
9.0	7.236894
10.0	7.834344
11.0	8.398562
12.0	8.931395
13.0	9.434589
14.0	9.909793
15.0	10.358564
16.0	10.782373
17.0	11.182607
18.0	11.560579
19.0	11.917526
20.0	12.254617
21.0	12.572959
22.0	12.873592
23.0	13.157503
24.0	13.425622
25.0	13.678826
26.0	13.917946
27.0	14.143765
28.0	14.357023
29.0	14.558419
30.0	14.748612
31.0	14.928226
32.0	15.097848
33.0	15.258036
34.0	15.409313
35.0	15.552175
36.0	15.687091
37.0	15.814502
38.0	15.934826
39.0	16.048457
40.0	16.155767
41.0	16.257108
42.0	16.352812
43.0	16.443193
44.0	16.528546
45.0	16.609151
46.0	16.685273
47.0	16.757161
48.0	16.825049
49.0	16.889162
50.0	16.949708
51.0	17.006887
52.0	17.060885
53.0	17.111879
54.0	17.160037
55.0	17.205516
56.0	17.248465
57.0	17.289025
58.0	17.327329
59.0	17.363502
60.0	17.397664
61.0	17.429925
62.0	17.460391
63.0	17.489163
64.0	17.516335
65.0	17.541995
66.0	17.566227
67.0	17.589112
68.0	17.610724
69.0	17.631134
70.0	17.650408
71.0	17.66861
72.0	17.6858
73.0	17.702033
74.0	17.717364
75.0	17.731842
76.0	17.745514
77.0	17.758426
78.0	17.77062
79.0	17.782136
80.0	17.793011
81.0	17.803281
82.0	17.812979
83.0	17.822139
84.0	17.830788
85.0	17.838957
86.0	17.846671
87.0	17.853956
88.0	17.860836
89.0	17.867334
90.0	17.873469
91.0	17.879264
92.0	17.884736
93.0	17.889904
94.0	17.894784
95.0	17.899393
96.0	17.903746
97.0	17.907856
98.0	17.911738
99.0	17.915404
100.0	17.918866