Index of /kundaje/marinovg/oak/ENCODE4/Chromatin-nanopores/2021-06-09-figures

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[PARENTDIR]Parent Directory  -  
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[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_136.matrix.png2021-06-14 10:02 11K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_137.matrix.png2021-06-14 10:02 11K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_138.matrix.png2021-06-14 10:02 11K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_139.matrix.png2021-06-14 10:02 11K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_140.matrix.png2021-06-14 10:02 7.8K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_141.matrix.png2021-06-14 10:02 7.8K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_142.matrix.png2021-06-14 10:03 8.4K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_143.matrix.png2021-06-14 10:03 9.4K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_144.matrix.png2021-06-14 10:03 7.9K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_145.matrix.png2021-06-14 10:03 10K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_146.matrix.png2021-06-14 11:28 12K 
[IMG]MYC-ecDNA-regions-300bp-tiling-50bp-step.others_147.matrix.png2021-06-14 11:28 11K 
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed2021-06-14 08:49 12K 
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks02021-06-14 08:50 340  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks12021-06-14 08:50 340  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks22021-06-14 08:50 340  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks32021-06-14 08:50 340  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks42021-06-14 08:50 340  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks52021-06-14 08:50 338  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks62021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks72021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks82021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks92021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks102021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks112021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks122021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks132021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks142021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks152021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks162021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks172021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks182021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks192021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks202021-06-14 08:50 330  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks212021-06-14 08:50 335  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks222021-06-14 08:50 346  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks232021-06-14 08:50 350  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks242021-06-14 08:50 350  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks252021-06-14 08:50 350  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks262021-06-14 08:50 350  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks272021-06-14 08:50 350  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks282021-06-14 08:50 350  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks292021-06-14 08:50 350  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks302021-06-14 08:50 350  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks312021-06-14 08:50 356  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks322021-06-14 08:50 360  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks332021-06-14 08:50 360  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks342021-06-14 08:50 360  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks352021-06-14 08:50 360  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.annotated.bed-chunks362021-06-14 08:50 72  
[ ]MYC-ecDNA-regions.300bp-tiling-50bp-step.bed2021-06-14 08:48 11K 
[ ]MYC-ecDNA-regions.bed2021-06-14 08:46 504  
[ ]chr8.1kb.bed2021-06-09 09:21 3.4M 
[ ]chr8.chrom.sizes2021-06-09 09:20 446  
[ ]ecDNA-vs-2016-11-16-refFlat.TSS-100bp-intersection22021-06-09 11:25 770  
[ ]ecDNA-vs-2016-11-16-refFlat.TSS-100bp-intersection2-King_eccDNA_NOME.deduped.pooled.sorted_CHH.GpC-only2021-06-09 11:34 9.2K 
[ ]ecDNA-vs-2016-11-16-refFlat.TSS-100bp-intersection2-King_eccDNA_NOME.deduped.pooled.sorted_CHH.GpC-only_noCpGpC2021-06-09 11:33 9.2K 
[ ]ecDNA-vs-2016-11-16-refFlat.TSS-100bp-intersection2-King_eccDNA_NOME.deduped.pooled.sorted_CpG.CpG-only2021-06-09 11:31 8.8K 
[ ]ecDNA-vs-2016-11-16-refFlat.TSS-100bp-intersection2-King_eccDNA_gDNA.deduped.pooled.sorted_CHH.GpC-only2021-06-09 11:33 9.2K 
[ ]ecDNA-vs-2016-11-16-refFlat.TSS-100bp-intersection2-King_eccDNA_gDNA.deduped.pooled.sorted_CHH.GpC-only_noCpGpC2021-06-09 11:33 9.2K 
[ ]ecDNA-vs-2016-11-16-refFlat.TSS-100bp-intersection2-King_eccDNA_gDNA.deduped.pooled.sorted_CpG.CpG-only2021-06-09 11:30 8.8K 
[ ]ecDNA-vs-chr8.1kb-intersection22021-06-09 11:22 38K 
[ ]ecDNA-vs-chr8.1kb-intersection2-King_eccDNA_NOME.deduped.pooled.sorted_CHH.GpC-only2021-06-09 11:20 9.6K 
[ ]ecDNA-vs-chr8.1kb-intersection2-King_eccDNA_NOME.deduped.pooled.sorted_CHH.GpC-only_noCpGpC2021-06-09 11:19 9.6K 
[ ]ecDNA-vs-chr8.1kb-intersection2-King_eccDNA_NOME.deduped.pooled.sorted_CpG.CpG-only2021-06-09 11:17 9.5K 
[ ]ecDNA-vs-chr8.1kb-intersection2-King_eccDNA_gDNA.deduped.pooled.sorted_CHH.GpC-only2021-06-09 11:19 9.6K 
[ ]ecDNA-vs-chr8.1kb-intersection2-King_eccDNA_gDNA.deduped.pooled.sorted_CHH.GpC-only_noCpGpC2021-06-09 11:19 9.6K 
[ ]ecDNA-vs-chr8.1kb-intersection2-King_eccDNA_gDNA.deduped.pooled.sorted_CpG.CpG-only2021-06-09 11:16 9.5K 
[ ]ecDNA-vs-chr8.1kb-outersection22021-06-09 11:22 3.4M 
[ ]ecDNA-vs-chr8.1kb-outersection2-King_eccDNA_NOME.deduped.pooled.sorted_CHH.GpC-only2021-06-09 11:34 10K 
[ ]ecDNA-vs-chr8.1kb-outersection2-King_eccDNA_NOME.deduped.pooled.sorted_CHH.GpC-only_noCpGpC2021-06-09 11:34 10K 
[ ]ecDNA-vs-chr8.1kb-outersection2-King_eccDNA_NOME.deduped.pooled.sorted_CpG.CpG-only2021-06-09 11:31 9.9K 
[ ]ecDNA-vs-chr8.1kb-outersection2-King_eccDNA_gDNA.deduped.pooled.sorted_CHH.GpC-only2021-06-09 11:34 10K 
[ ]ecDNA-vs-chr8.1kb-outersection2-King_eccDNA_gDNA.deduped.pooled.sorted_CHH.GpC-only_noCpGpC2021-06-09 11:31 8.3K 
[ ]ecDNA-vs-chr8.1kb-outersection2-King_eccDNA_gDNA.deduped.pooled.sorted_CpG.CpG-only2021-06-09 11:31 9.9K 
[ ]ecDNA.bed2021-06-09 09:19 25  
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average2021-06-09 07:32 4.8M 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr12021-06-09 07:33 383K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr22021-06-09 07:33 377K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr32021-06-09 07:33 307K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr42021-06-09 07:33 294K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr52021-06-09 07:33 276K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr62021-06-09 07:33 261K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr72021-06-09 07:33 242K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr82021-06-09 07:33 219K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr92021-06-09 07:33 206K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr102021-06-09 07:33 208K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr112021-06-09 07:33 210K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr122021-06-09 07:33 209K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr132021-06-09 07:33 177K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr142021-06-09 07:33 161K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr152021-06-09 07:33 153K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr162021-06-09 07:33 139K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr172021-06-09 07:33 128K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr182021-06-09 07:33 122K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr192021-06-09 07:33 89K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr202021-06-09 07:33 99K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr212021-06-09 07:33 69K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr222021-06-09 07:33 75K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chrM2021-06-09 07:33 27  
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chrX2021-06-09 07:33 235K 
[ ]hg38.20kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chrY2021-06-09 07:33 76K 
[ ]hg38.20kb.bed2021-06-09 07:24 3.7M 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average2021-06-09 07:23 2.0M 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr12021-06-09 07:33 155K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr22021-06-09 07:33 152K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr32021-06-09 07:33 124K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr42021-06-09 07:33 119K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr52021-06-09 07:33 112K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr62021-06-09 07:33 106K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr72021-06-09 07:33 98K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr82021-06-09 07:33 89K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr92021-06-09 07:33 83K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr102021-06-09 07:33 84K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr112021-06-09 07:33 85K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr122021-06-09 07:33 84K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr132021-06-09 07:33 72K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr142021-06-09 07:33 65K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr152021-06-09 07:33 62K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr162021-06-09 07:33 56K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr172021-06-09 07:33 52K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr182021-06-09 07:33 49K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr192021-06-09 07:33 36K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr202021-06-09 07:33 40K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr212021-06-09 07:33 28K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chr222021-06-09 07:33 30K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chrM2021-06-09 07:33 27  
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chrX2021-06-09 07:33 95K 
[ ]hg38.50kb.L1997-King_eccDNA_NOME_rep1.2x150mers.bwameth.hg38.dedup.average.chrY2021-06-09 07:33 31K 
[ ]hg38.50kb.bed2021-06-09 07:14 1.5M 
[ ]z2021-06-14 10:01 15K 
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[ ]zSMM.17.out2021-06-14 10:03 1.1K 
[ ]zSMM.17.sbatch2021-06-14 10:01 596  
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[ ]zSMM.18.out2021-06-14 10:03 1.1K 
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[ ]zSMM.19.err2021-06-14 10:01 0  
[ ]zSMM.19.out2021-06-14 10:03 1.1K 
[ ]zSMM.19.sbatch2021-06-14 10:01 596  
[ ]zSMM.20.err2021-06-14 10:01 0  
[ ]zSMM.20.out2021-06-14 10:03 1.1K 
[ ]zSMM.20.sbatch2021-06-14 10:01 596  
[ ]zSMM.21.err2021-06-14 10:01 0  
[ ]zSMM.21.out2021-06-14 10:03 1.1K 
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[ ]zSMM.22.err2021-06-14 10:01 0  
[ ]zSMM.22.out2021-06-14 10:03 1.1K 
[ ]zSMM.22.sbatch2021-06-14 10:01 596  
[ ]zSMM.23.err2021-06-14 10:01 0  
[ ]zSMM.23.out2021-06-14 10:02 1.1K 
[ ]zSMM.23.sbatch2021-06-14 10:01 596  
[ ]zSMM.24.err2021-06-14 10:02 0  
[ ]zSMM.24.out2021-06-14 10:03 1.1K 
[ ]zSMM.24.sbatch2021-06-14 10:01 596  
[ ]zSMM.25.err2021-06-14 10:02 0  
[ ]zSMM.25.out2021-06-14 10:03 1.1K 
[ ]zSMM.25.sbatch2021-06-14 10:01 596  
[ ]zSMM.26.err2021-06-14 10:01 0  
[ ]zSMM.26.out2021-06-14 10:03 1.1K 
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