python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320DM_rep1_atac-GSM4861351.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320DM_rep1_atac-GSM4861351.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320DM_rep2_atac-GSM4861353.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320DM_rep2_atac-GSM4861353.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320DM_rep4_atac-GSM4861357.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320DM_rep4_atac-GSM4861357.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320DM_rep5_atac-GSM4861359.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320DM_rep5_atac-GSM4861359.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320DM_rep6_atac-GSM4861361.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320DM_rep6_atac-GSM4861361.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320DM_rep7_atac-GSM4861363.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320DM_rep7_atac-GSM4861363.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320DM_rep8_atac-GSM4861365.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320DM_rep8_atac-GSM4861365.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320HSR_rep1_atac-GSM4861367.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320HSR_rep1_atac-GSM4861367.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320HSR_rep2_atac-GSM4861369.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320HSR_rep2_atac-GSM4861369.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320HSR_rep3_atac-GSM4861371.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320HSR_rep3_atac-GSM4861371.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320HSR_rep4_atac-GSM4861373.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320HSR_rep4_atac-GSM4861373.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320HSR_rep5_atac-GSM4861375.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320HSR_rep5_atac-GSM4861375.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320HSR_rep6_atac-GSM4861377.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320HSR_rep6_atac-GSM4861377.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320HSR_rep7_atac-GSM4861379.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320HSR_rep7_atac-GSM4861379.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/genomes/hg20/2016-11-16-refFlat.TSS-0bp.bed 0 1 3 4000 COLO320HSR_rep8_atac-GSM4861381.2x36mers.hg38.unique.nochrM.dedup.bigWig COLO320HSR_rep8_atac-GSM4861381.2x36mers.hg38.unique.nochrM.dedup.TSS_profile -normalize &