python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G0 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G0.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G0.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G1 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G1.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G1.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G10 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G10.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G10.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G100 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G100.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G100.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G101 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G101.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G101.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G102 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G102.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G102.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G103 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G103.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G103.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G104 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G104.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G104.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G105 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G105.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G105.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G106 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G106.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G106.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G107 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G107.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G107.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G108 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G108.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G108.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G109 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G109.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G109.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G11 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G11.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G11.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G110 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G110.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G110.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G111 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G111.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G111.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G112 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G112.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G112.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G113 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G113.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G113.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G114 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G114.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G114.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G115 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G115.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G115.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G116 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G116.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G116.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G117 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G117.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G117.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G118 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G118.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G118.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G119 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G119.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G119.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G12 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G12.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G12.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G120 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G120.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G120.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G121 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G121.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G121.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G122 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G122.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G122.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G123 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G123.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G123.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G13 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G13.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G13.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G14 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G14.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G14.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G15 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G15.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G15.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G16 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G16.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G16.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G17 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G17.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G17.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G18 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G18.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G18.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G19 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G19.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G19.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G2 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G2.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G2.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G20 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G20.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G20.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G21 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G21.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G21.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G22 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G22.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G22.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G23 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G23.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G23.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G24 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G24.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G24.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G25 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G25.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G25.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G26 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G26.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G26.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G27 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G27.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G27.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G28 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G28.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G28.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G29 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G29.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G29.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G3 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G3.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G3.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G30 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G30.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G30.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G31 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G31.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G31.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G32 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G32.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G32.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G33 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G33.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G33.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G34 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G34.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G34.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G35 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G35.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G35.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G36 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G36.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G36.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G37 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G37.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G37.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G38 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G38.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G38.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G39 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G39.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G39.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G4 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G4.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G4.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G40 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G40.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G40.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G41 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G41.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G41.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G42 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G42.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G42.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G43 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G43.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G43.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G44 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G44.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G44.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G45 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G45.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G45.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G46 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G46.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G46.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G47 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G47.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G47.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G48 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G48.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G48.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G49 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G49.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G49.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G5 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G5.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G5.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G50 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G50.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G50.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G51 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G51.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G51.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G52 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G52.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G52.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G53 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G53.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G53.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G54 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G54.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G54.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G55 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G55.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G55.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G56 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G56.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G56.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G57 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G57.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G57.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G58 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G58.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G58.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G59 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G59.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G59.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G6 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G6.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G6.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G60 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G60.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G60.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G61 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G61.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G61.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G62 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G62.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G62.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G63 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G63.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G63.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G64 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G64.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G64.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G65 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G65.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G65.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G66 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G66.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G66.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G67 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G67.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G67.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G68 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G68.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G68.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G69 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G69.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G69.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G7 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G7.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G7.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G70 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G70.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G70.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G71 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G71.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G71.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G72 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G72.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G72.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G73 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G73.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G73.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G74 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G74.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G74.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G75 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G75.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G75.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G76 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G76.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G76.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G77 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G77.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G77.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G78 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G78.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G78.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G79 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G79.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G79.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G8 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G8.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G8.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G80 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G80.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G80.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G81 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G81.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G81.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G82 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G82.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G82.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G83 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G83.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G83.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G84 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G84.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G84.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G85 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G85.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G85.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G86 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G86.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G86.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G87 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G87.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G87.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G88 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G88.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G88.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G89 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G89.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G89.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G9 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G9.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G9.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G90 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G90.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G90.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G91 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G91.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G91.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G92 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G92.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G92.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G93 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G93.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G93.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G94 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G94.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G94.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G95 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G95.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G95.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G96 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G96.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G96.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G97 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G97.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G97.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G98 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G98.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G98.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py pieces-2019_10_15_m6A_Positive.generic-A-C-T-G99 0.5 pieces-2019_10_15_m6A_Positive.generic-A-C-T-G99.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019_10_15_m6A_Positive.generic-A-C-T-G99.BI_w10_a10_b10.reads.tsv