python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.0.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.0.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.0.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.100.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.100.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.100.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.101.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.101.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.101.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.102.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.102.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.102.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.103.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.103.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.103.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.104.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.104.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.104.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.105.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.105.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.105.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.106.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.106.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.106.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.107.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.107.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.107.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.108.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.108.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.108.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.109.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.109.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.109.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.10.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.10.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.10.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.110.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.110.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.110.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.111.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.111.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.111.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.112.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.112.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.112.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.113.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.113.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.113.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.114.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.114.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.114.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.115.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.115.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.115.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.116.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.116.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.116.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.117.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.117.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.117.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.118.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.118.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.118.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.119.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.119.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.119.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.11.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.11.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.11.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.120.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.120.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.120.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.121.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.121.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.121.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.122.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.122.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.122.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.123.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.123.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.123.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.124.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.124.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.124.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.125.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.125.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.125.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.126.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.126.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.126.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.127.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.127.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.127.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.128.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.128.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.128.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.129.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.129.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.129.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.12.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.12.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.12.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.130.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.130.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.130.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.131.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.131.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.131.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.132.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.132.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.132.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.133.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.133.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.133.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.134.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.134.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.134.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.135.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.135.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.135.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.136.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.136.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.136.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.137.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.137.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.137.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.138.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.138.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.138.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.139.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.139.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.139.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.13.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.13.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.13.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.140.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.140.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.140.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.141.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.141.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.141.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.142.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.142.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.142.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.143.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.143.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.143.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.144.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.144.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.144.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.145.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.145.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.145.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.146.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.146.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.146.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.147.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.147.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.147.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.148.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.148.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.148.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.149.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.149.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.149.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.14.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.14.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.14.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.150.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.150.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.150.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.151.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.151.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.151.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.152.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.152.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.152.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.153.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.153.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.153.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.154.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.154.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.154.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.155.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.155.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.155.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.156.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.156.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.156.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.157.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.157.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.157.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.158.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.158.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.158.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.159.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.159.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.159.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.15.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.15.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.15.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.160.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.160.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.160.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.161.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.161.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.161.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.162.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.162.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.162.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.163.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.163.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.163.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.164.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.164.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.164.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.165.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.165.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.165.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.166.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.166.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.166.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.167.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.167.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.167.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.168.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.168.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.168.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.169.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.169.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.169.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.16.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.16.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.16.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.170.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.170.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.170.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.171.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.171.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.171.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.172.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.172.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.172.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.173.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.173.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.173.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.174.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.174.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.174.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.175.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.175.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.175.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.176.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.176.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.176.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.177.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.177.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.177.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.178.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.178.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.178.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.179.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.179.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.179.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.17.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.17.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.17.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.180.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.180.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.180.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.181.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.181.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.181.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.182.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.182.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.182.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.183.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.183.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.183.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.184.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.184.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.184.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.185.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.185.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.185.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.186.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.186.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.186.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.187.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.187.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.187.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.188.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.188.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.188.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.189.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.189.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.189.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.18.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.18.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.18.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.190.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.190.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.190.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.191.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.191.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.191.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.192.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.192.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.192.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.193.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.193.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.193.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.194.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.194.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.194.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.195.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.195.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.195.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.196.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.196.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.196.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.197.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.197.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.197.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.198.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.198.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.198.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.199.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.199.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.199.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.19.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.19.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.19.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.1.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.1.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.1.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.200.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.200.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.200.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.201.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.201.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.201.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.202.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.202.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.202.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.203.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.203.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.203.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.204.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.204.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.204.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.205.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.205.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.205.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.206.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.206.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.206.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.207.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.207.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.207.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.208.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.208.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.208.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.209.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.209.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.209.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.20.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.20.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.20.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.210.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.210.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.210.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.211.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.211.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.211.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.212.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.212.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.212.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.213.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.213.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.213.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.214.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.214.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.214.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.215.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.215.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.215.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.216.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.216.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.216.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.217.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.217.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.217.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.218.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.218.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.218.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.219.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.219.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.219.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.21.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.21.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.21.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.220.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.220.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.220.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.221.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.221.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.221.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.222.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.222.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.222.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.223.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.223.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.223.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.224.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.224.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.224.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.225.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.225.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.225.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.226.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.226.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.226.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.227.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.227.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.227.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.228.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.228.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.228.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.229.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.229.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.229.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.22.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.22.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.22.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.230.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.230.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.230.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.231.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.231.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.231.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.232.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.232.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.232.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.233.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.233.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.233.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.234.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.234.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.234.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.235.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.235.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.235.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.236.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.236.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.236.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.237.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.237.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.237.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.238.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.238.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.238.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.239.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.239.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.239.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.23.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.23.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.23.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.240.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.240.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.240.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.241.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.241.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.241.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.242.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.242.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.242.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.243.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.243.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.243.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.244.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.244.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.244.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.245.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.245.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.245.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.246.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.246.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.246.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.247.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.247.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.247.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.248.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.248.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.248.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.249.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.249.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.249.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.24.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.24.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.24.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.250.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.250.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.250.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.251.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.251.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.251.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.252.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.252.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.252.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.253.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.253.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.253.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.254.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.254.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.254.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.255.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.255.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.255.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.256.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.256.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.256.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.257.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.257.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.257.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.258.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.258.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.258.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.259.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.259.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.259.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.25.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.25.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.25.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.260.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.260.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.260.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.261.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.261.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.261.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.262.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.262.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.262.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.263.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.263.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.263.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.264.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.264.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.264.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.265.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.265.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.265.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.266.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.266.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.266.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.267.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.267.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.267.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.268.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.268.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.268.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.269.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.269.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.269.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.26.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.26.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.26.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.270.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.270.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.270.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.271.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.271.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.271.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.272.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.272.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.272.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.273.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.273.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.273.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.274.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.274.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.274.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.275.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.275.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.275.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.276.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.276.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.276.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.277.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.277.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.277.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.278.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.278.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.278.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.279.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.279.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.279.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.27.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.27.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.27.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.280.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.280.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.280.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.281.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.281.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.281.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.282.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.282.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.282.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.283.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.283.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.283.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.284.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.284.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.284.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.285.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.285.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.285.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.286.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.286.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.286.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.287.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.287.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.287.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.288.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.288.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.288.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.289.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.289.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.289.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.28.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.28.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.28.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.290.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.290.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.290.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.291.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.291.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.291.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.292.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.292.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.292.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.293.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.293.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.293.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.294.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.294.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.294.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.295.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.295.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.295.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.296.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.296.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.296.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.297.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.297.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.297.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.298.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.298.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.298.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.299.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.299.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.299.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.29.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.29.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.29.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.2.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.2.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.2.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.300.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.300.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.300.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.301.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.301.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.301.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.302.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.302.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.302.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.303.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.303.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.303.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.304.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.304.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.304.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.305.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.305.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.305.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.306.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.306.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.306.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.307.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.307.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.307.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.308.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.308.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.308.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.309.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.309.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.309.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.30.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.30.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.30.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.310.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.310.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.310.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.311.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.311.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.311.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.312.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.312.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.312.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.313.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.313.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.313.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.314.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.314.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.314.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.315.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.315.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.315.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.316.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.316.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.316.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.317.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.317.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.317.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.318.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.318.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.318.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.319.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.319.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.319.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.31.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.31.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.31.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.320.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.320.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.320.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.321.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.321.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.321.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.322.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.322.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.322.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.323.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.323.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.323.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.324.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.324.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.324.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.325.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.325.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.325.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.326.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.326.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.326.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.327.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.327.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.327.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.328.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.328.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.328.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.329.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.329.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.329.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.32.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.32.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.32.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.330.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.330.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.330.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.331.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.331.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.331.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.332.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.332.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.332.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.333.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.333.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.333.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.334.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.334.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.334.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.335.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.335.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.335.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.336.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.336.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.336.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.337.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.337.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.337.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.338.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.338.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.338.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.339.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.339.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.339.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.33.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.33.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.33.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.340.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.340.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.340.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.341.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.341.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.341.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.342.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.342.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.342.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.343.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.343.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.343.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.344.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.344.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.344.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.345.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.345.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.345.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.346.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.346.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.346.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.347.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.347.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.347.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.348.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.348.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.348.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.349.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.349.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.349.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.34.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.34.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.34.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.350.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.350.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.350.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.351.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.351.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.351.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.352.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.352.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.352.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.353.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.353.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.353.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.354.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.354.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.354.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.355.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.355.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.355.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.356.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.356.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.356.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.357.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.357.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.357.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.358.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.358.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.358.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.359.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.359.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.359.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.35.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.35.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.35.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.360.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.360.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.360.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.361.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.361.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.361.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.362.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.362.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.362.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.363.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.363.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.363.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.364.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.364.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.364.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.365.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.365.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.365.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.366.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.366.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.366.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.367.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.367.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.367.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.368.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.368.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.368.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.369.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.369.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.369.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.36.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.36.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.36.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.370.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.370.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.370.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.371.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.371.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.371.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.372.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.372.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.372.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.373.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.373.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.373.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.374.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.374.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.374.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.375.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.375.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.375.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.376.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.376.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.376.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.377.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.377.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.377.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.378.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.378.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.378.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.379.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.379.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.379.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.37.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.37.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.37.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.380.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.380.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.380.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.381.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.381.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.381.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.382.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.382.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.382.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.383.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.383.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.383.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.384.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.384.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.384.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.385.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.385.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.385.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.386.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.386.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.386.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.387.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.387.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.387.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.388.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.388.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.388.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.389.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.389.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.389.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.38.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.38.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.38.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.390.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.390.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.390.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.391.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.391.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.391.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.392.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.392.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.392.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.393.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.393.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.393.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.394.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.394.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.394.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.395.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.395.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.395.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.396.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.396.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.396.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.397.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.397.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.397.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.398.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.398.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.398.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.399.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.399.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.399.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.39.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.39.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.39.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.3.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.3.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.3.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.400.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.400.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.400.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.401.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.401.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.401.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.402.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.402.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.402.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.403.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.403.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.403.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.404.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.404.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.404.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.405.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.405.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.405.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.406.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.406.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.406.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.407.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.407.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.407.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.408.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.408.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.408.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.409.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.409.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.409.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.40.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.40.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.40.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.410.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.410.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.410.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.411.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.411.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.411.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.412.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.412.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.412.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.413.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.413.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.413.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.414.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.414.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.414.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.415.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.415.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.415.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.416.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.416.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.416.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.417.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.417.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.417.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.418.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.418.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.418.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.419.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.419.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.419.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.41.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.41.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.41.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.420.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.420.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.420.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.421.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.421.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.421.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.422.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.422.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.422.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.423.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.423.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.423.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.424.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.424.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.424.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.425.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.425.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.425.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.426.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.426.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.426.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.427.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.427.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.427.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.428.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.428.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.428.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.429.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.429.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.429.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.42.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.42.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.42.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.430.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.430.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.430.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.431.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.431.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.431.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.432.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.432.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.432.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.433.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.433.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.433.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.434.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.434.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.434.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.435.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.435.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.435.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.436.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.436.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.436.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.437.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.437.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.437.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.438.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.438.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.438.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.439.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.439.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.439.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.43.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.43.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.43.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.440.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.440.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.440.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.441.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.441.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.441.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.442.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.442.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.442.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.443.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.443.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.443.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.444.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.444.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.444.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.445.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.445.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.445.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.446.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.446.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.446.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.447.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.447.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.447.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.448.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.448.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.448.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.449.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.449.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.449.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.44.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.44.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.44.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.450.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.450.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.450.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.451.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.451.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.451.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.452.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.452.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.452.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.453.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.453.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.453.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.454.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.454.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.454.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.455.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.455.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.455.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.456.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.456.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.456.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.457.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.457.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.457.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.458.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.458.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.458.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.459.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.459.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.459.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.45.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.45.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.45.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.460.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.460.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.460.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.461.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.461.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.461.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.462.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.462.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.462.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.463.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.463.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.463.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.464.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.464.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.464.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.465.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.465.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.465.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.466.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.466.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.466.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.467.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.467.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.467.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.468.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.468.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.468.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.469.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.469.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.469.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.46.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.46.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.46.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.470.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.470.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.470.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.471.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.471.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.471.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.472.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.472.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.472.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.473.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.473.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.473.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.474.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.474.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.474.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.475.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.475.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.475.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.476.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.476.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.476.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.477.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.477.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.477.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.478.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.478.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.478.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.479.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.479.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.479.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.47.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.47.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.47.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.480.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.480.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.480.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.481.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.481.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.481.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.482.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.482.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.482.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.483.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.483.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.483.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.484.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.484.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.484.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.485.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.485.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.485.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.486.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.486.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.486.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.487.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.487.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.487.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.488.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.488.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.488.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.489.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.489.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.489.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.48.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.48.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.48.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.490.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.490.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.490.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.491.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.491.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.491.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.492.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.492.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.492.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.493.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.493.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.493.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.494.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.494.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.494.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.495.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.495.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.495.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.496.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.496.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.496.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.497.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.497.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.497.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.498.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.498.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.498.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.499.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.499.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.499.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.49.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.49.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.49.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.4.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.4.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.4.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.500.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.500.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.500.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.501.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.501.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.501.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.502.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.502.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.502.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.503.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.503.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.503.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.504.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.504.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.504.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.505.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.505.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.505.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.506.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.506.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.506.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.507.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.507.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.507.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.508.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.508.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.508.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.509.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.509.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.509.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.50.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.50.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.50.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.510.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.510.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.510.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.511.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.511.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.511.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.512.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.512.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.512.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.513.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.513.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.513.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.514.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.514.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.514.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.515.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.515.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.515.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.516.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.516.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.516.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.517.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.517.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.517.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.518.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.518.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.518.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.519.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.519.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.519.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.51.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.51.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.51.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.520.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.520.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.520.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.521.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.521.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.521.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.522.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.522.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.522.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.523.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.523.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.523.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.524.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.524.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.524.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.525.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.525.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.525.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.526.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.526.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.526.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.527.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.527.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.527.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.528.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.528.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.528.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.529.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.529.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.529.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.52.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.52.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.52.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.530.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.530.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.530.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.531.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.531.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.531.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.532.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.532.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.532.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.533.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.533.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.533.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.534.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.534.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.534.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.535.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.535.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.535.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.536.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.536.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.536.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.537.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.537.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.537.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.538.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.538.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.538.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.539.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.539.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.539.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.53.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.53.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.53.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.540.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.540.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.540.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.541.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.541.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.541.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.542.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.542.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.542.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.543.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.543.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.543.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.544.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.544.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.544.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.545.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.545.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.545.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.546.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.546.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.546.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.547.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.547.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.547.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.548.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.548.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.548.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.549.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.549.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.549.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.54.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.54.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.54.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.550.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.550.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.550.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.551.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.551.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.551.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.552.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.552.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.552.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.553.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.553.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.553.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.554.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.554.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.554.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.555.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.555.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.555.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.556.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.556.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.556.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.557.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.557.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.557.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.558.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.558.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.558.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.559.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.559.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.559.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.55.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.55.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.55.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.560.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.560.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.560.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.561.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.561.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.561.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.562.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.562.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.562.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.563.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.563.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.563.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.564.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.564.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.564.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.565.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.565.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.565.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.566.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.566.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.566.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.567.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.567.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.567.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.568.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.568.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.568.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.569.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.569.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.569.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.56.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.56.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.56.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.570.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.570.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.570.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.571.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.571.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.571.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.572.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.572.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.572.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.573.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.573.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.573.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.574.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.574.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.574.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.575.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.575.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.575.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.576.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.576.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.576.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.577.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.577.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.577.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.578.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.578.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.578.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.579.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.579.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.579.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.57.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.57.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.57.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.580.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.580.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.580.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.581.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.581.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.581.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.582.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.582.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.582.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.583.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.583.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.583.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.584.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.584.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.584.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.585.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.585.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.585.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.586.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.586.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.586.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.587.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.587.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.587.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.588.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.588.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.588.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.589.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.589.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.589.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.58.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.58.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.58.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.590.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.590.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.590.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.591.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.591.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.591.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.592.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.592.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.592.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.593.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.593.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.593.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.594.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.594.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.594.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.595.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.595.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.595.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.596.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.596.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.596.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.597.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.597.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.597.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.598.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.598.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.598.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.599.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.599.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.599.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.59.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.59.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.59.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.5.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.5.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.5.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.600.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.600.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.600.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.601.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.601.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.601.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.602.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.602.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.602.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.603.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.603.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.603.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.604.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.604.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.604.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.605.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.605.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.605.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.606.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.606.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.606.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.607.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.607.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.607.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.608.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.608.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.608.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.609.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.609.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.609.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.60.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.60.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.60.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.610.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.610.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.610.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.611.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.611.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.611.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.612.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.612.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.612.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.613.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.613.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.613.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.614.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.614.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.614.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.615.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.615.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.615.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.616.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.616.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.616.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.617.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.617.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.617.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.618.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.618.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.618.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.619.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.619.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.619.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.61.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.61.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.61.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.620.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.620.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.620.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.621.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.621.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.621.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.622.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.622.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.622.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.623.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.623.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.623.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.624.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.624.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.624.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.625.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.625.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.625.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.626.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.626.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.626.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.627.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.627.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.627.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.628.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.628.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.628.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.629.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.629.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.629.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.62.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.62.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.62.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.630.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.630.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.630.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.631.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.631.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.631.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.632.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.632.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.632.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.633.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.633.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.633.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.634.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.634.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.634.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.635.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.635.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.635.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.636.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.636.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.636.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.637.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.637.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.637.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.638.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.638.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.638.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.639.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.639.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.639.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.63.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.63.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.63.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.640.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.640.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.640.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.641.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.641.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.641.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.642.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.642.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.642.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.643.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.643.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.643.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.644.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.644.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.644.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.645.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.645.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.645.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.64.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.64.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.64.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.65.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.65.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.65.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.66.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.66.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.66.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.67.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.67.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.67.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.68.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.68.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.68.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.69.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.69.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.69.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.6.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.6.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.6.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.70.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.70.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.70.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.71.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.71.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.71.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.72.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.72.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.72.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.73.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.73.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.73.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.74.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.74.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.74.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.75.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.75.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.75.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.76.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.76.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.76.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.77.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.77.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.77.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.78.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.78.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.78.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.79.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.79.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.79.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.7.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.7.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.7.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.80.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.80.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.80.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.81.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.81.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.81.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.82.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.82.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.82.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.83.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.83.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.83.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.84.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.84.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.84.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.85.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.85.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.85.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.86.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.86.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.86.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.87.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.87.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.87.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.88.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.88.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.88.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.89.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.89.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.89.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.8.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.8.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.8.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.90.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.90.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.90.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.91.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.91.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.91.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.92.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.92.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.92.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.93.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.93.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.93.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.94.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.94.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.94.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.95.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.95.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.95.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.96.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.96.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.96.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.97.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.97.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.97.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.98.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.98.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.98.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.99.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.99.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.99.tombo.m6A-only.reads.BI_w10_a10_b10.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019_04_24_S2_Alkylation.9.tombo.m6A-only.reads.tsv 0.5 2019_04_24_S2_Alkylation.9.tombo.m6A-only.reads.tsv.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile 2019_04_24_S2_Alkylation.9.tombo.m6A-only.reads.BI_w10_a10_b10.tsv