Index of /kundaje/marinovg/oak/ENCODE4/Chromatin-nanopores/2018-05-21-NextSeq-run-S2-ATAC

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[TXT]ATACTSSscore.txt2018-05-23 12:39 1.8K 
[DIR]DESeq2/2018-05-23 20:55 -  
[ ]IDR-0.10.200bp.100bp-radius.L209-S2_Ecd_0h_Rep1.RPM.gz2018-05-23 19:45 188K 
[ ]IDR-0.10.200bp.100bp-radius.L209-S2_Ecd_0h_Rep1.readCounts2018-05-23 20:40 545K 
[ ]IDR-0.10.200bp.100bp-radius.L210-S2_Ecd_0h_Rep2.RPM.gz2018-05-23 19:45 186K 
[ ]IDR-0.10.200bp.100bp-radius.L210-S2_Ecd_0h_Rep2.readCounts2018-05-23 20:40 543K 
[ ]IDR-0.10.200bp.100bp-radius.L211-S2_Ecd_2h_Rep1.RPM.gz2018-05-23 19:45 184K 
[ ]IDR-0.10.200bp.100bp-radius.L211-S2_Ecd_2h_Rep1.readCounts2018-05-23 20:41 543K 
[ ]IDR-0.10.200bp.100bp-radius.L212-S2_Ecd_2h_Rep2.RPM.gz2018-05-23 19:45 188K 
[ ]IDR-0.10.200bp.100bp-radius.L212-S2_Ecd_2h_Rep2.readCounts2018-05-23 20:41 547K 
[ ]IDR-0.10.200bp.100bp-radius.L213-S2_Ecd_4h_Rep1.RPM.gz2018-05-23 19:45 189K 
[ ]IDR-0.10.200bp.100bp-radius.L213-S2_Ecd_4h_Rep1.readCounts2018-05-23 20:41 547K 
[ ]IDR-0.10.200bp.100bp-radius.L214-S2_Ecd_4h_Rep2.RPM.gz2018-05-23 19:45 188K 
[ ]IDR-0.10.200bp.100bp-radius.L214-S2_Ecd_4h_Rep2.readCounts2018-05-23 20:42 546K 
[ ]IDR-0.10.200bp.100bp-radius.L215-S2_Ecd_8h_Rep1.RPM.gz2018-05-23 19:45 187K 
[ ]IDR-0.10.200bp.100bp-radius.L215-S2_Ecd_8h_Rep1.readCounts2018-05-23 20:42 547K 
[ ]IDR-0.10.200bp.100bp-radius.L216-S2_Ecd_8h_Rep2.RPM.gz2018-05-23 19:45 188K 
[ ]IDR-0.10.200bp.100bp-radius.L216-S2_Ecd_8h_Rep2.readCounts2018-05-23 20:42 549K 
[ ]IDR-0.10.200bp.100bp-radius.L217-S2_Ecd_12h_Rep1.RPM.gz2018-05-23 19:45 188K 
[ ]IDR-0.10.200bp.100bp-radius.L217-S2_Ecd_12h_Rep1.readCounts2018-05-23 20:42 544K 
[ ]IDR-0.10.200bp.100bp-radius.L218-S2_Ecd_12h_Rep2.RPM.gz2018-05-23 19:45 190K 
[ ]IDR-0.10.200bp.100bp-radius.L218-S2_Ecd_12h_Rep2.readCounts2018-05-23 20:43 546K 
[ ]IDR-0.10.200bp.100bp-radius.L219-S2_Ecd_24h_Rep1.RPM.gz2018-05-23 19:45 185K 
[ ]IDR-0.10.200bp.100bp-radius.L219-S2_Ecd_24h_Rep1.readCounts2018-05-23 20:43 544K 
[ ]IDR-0.10.200bp.100bp-radius.L220-S2_Ecd_24h_Rep2.RPM.gz2018-05-23 19:45 185K 
[ ]IDR-0.10.200bp.100bp-radius.L220-S2_Ecd_24h_Rep2.readCounts2018-05-23 20:43 543K 
[ ]IDR-0.10.200bp.100bp-radius.L221-S2_no_Ecd_24h_Rep1.RPM.gz2018-05-23 19:45 189K 
[ ]IDR-0.10.200bp.100bp-radius.L221-S2_no_Ecd_24h_Rep1.readCounts2018-05-23 20:43 546K 
[ ]IDR-0.10.200bp.100bp-radius.L222-S2_no_Ecd_24h_Rep2.RPM.gz2018-05-23 19:45 183K 
[ ]IDR-0.10.200bp.100bp-radius.L222-S2_no_Ecd_24h_Rep2.readCounts2018-05-23 20:44 541K 
[ ]IDR-0.10.200bp.100bp-radius.RPM.files2018-05-23 19:47 928  
[ ]IDR-0.10.200bp.100bp-radius.RPM.table2018-05-23 19:47 3.8M 
[ ]IDR-0.10.200bp.100bp-radius.bed2018-05-23 19:42 709K 
[ ]IDR-0.10.200bp.100bp-radius.counts.files2018-05-23 20:41 1.0K 
[ ]IDR-0.10.200bp.100bp-radius.counts.table2018-05-23 20:44 1.6M 
[ ]IDR-0.10.200bp.100bp-radius.log2RPM+1.table2018-05-23 19:51 3.8M 
[ ]IDR-0.10.200bp.100bp-radius.normalizedToMean.minMax0.5.table2018-05-23 21:09 4.2M 
[ ]IDR-0.10.200bp.100bp-radius.normalizedToMean.minMax2.table2018-05-23 21:10 4.0M 
[ ]IDR-0.10.200bp.100bp-radius.normalizedToMean.minMax5.table2018-05-23 21:10 3.2M 
[ ]IDR-0.10.200bp.100bp-radius.normalizedToMean.table2018-05-23 20:31 4.2M 
[ ]IDR-0.10.200bp.200bp-radius.bed2018-05-23 19:41 709K 
[ ]IDR-0.10.files2018-05-23 19:41 445  
[ ]S2_Ecd_0h.merged.sorted.MACS-2.1.0.IDR2018-05-23 17:59 6.1M 
[ ]S2_Ecd_0h.merged.sorted.MACS-2.1.0.IDR-0.052018-05-23 19:35 797K 
[ ]S2_Ecd_0h.merged.sorted.MACS-2.1.0.IDR-0.102018-05-23 19:35 960K 
[IMG]S2_Ecd_0h.merged.sorted.MACS-2.1.0.IDR.png2018-05-23 17:59 534K 
[ ]S2_Ecd_0h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz2018-05-23 17:49 1.8M 
[ ]S2_Ecd_0h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.300K.gz2018-05-23 17:55 1.3M 
[ ]S2_Ecd_2h.merged.sorted.MACS-2.1.0.IDR2018-05-23 17:59 6.6M 
[ ]S2_Ecd_2h.merged.sorted.MACS-2.1.0.IDR-0.052018-05-23 19:35 929K 
[ ]S2_Ecd_2h.merged.sorted.MACS-2.1.0.IDR-0.102018-05-23 19:35 1.1M 
[IMG]S2_Ecd_2h.merged.sorted.MACS-2.1.0.IDR.png2018-05-23 17:59 519K 
[ ]S2_Ecd_2h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz2018-05-23 17:49 2.1M 
[ ]S2_Ecd_2h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.300K.gz2018-05-23 17:55 1.5M 
[ ]S2_Ecd_4h.merged.sorted.MACS-2.1.0.IDR2018-05-23 17:59 6.0M 
[ ]S2_Ecd_4h.merged.sorted.MACS-2.1.0.IDR-0.052018-05-23 19:35 637K 
[ ]S2_Ecd_4h.merged.sorted.MACS-2.1.0.IDR-0.102018-05-23 19:35 779K 
[IMG]S2_Ecd_4h.merged.sorted.MACS-2.1.0.IDR.png2018-05-23 17:58 526K 
[ ]S2_Ecd_4h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz2018-05-23 17:50 1.9M 
[ ]S2_Ecd_4h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.300K.gz2018-05-23 17:55 1.3M 
[ ]S2_Ecd_8h.merged.sorted.MACS-2.1.0.IDR2018-05-23 17:59 5.9M 
[ ]S2_Ecd_8h.merged.sorted.MACS-2.1.0.IDR-0.052018-05-23 19:35 654K 
[ ]S2_Ecd_8h.merged.sorted.MACS-2.1.0.IDR-0.102018-05-23 19:35 812K 
[IMG]S2_Ecd_8h.merged.sorted.MACS-2.1.0.IDR.png2018-05-23 17:59 529K 
[ ]S2_Ecd_8h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz2018-05-23 17:50 2.0M 
[ ]S2_Ecd_8h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.300K.gz2018-05-23 17:56 1.4M 
[ ]S2_Ecd_12h.merged.sorted.MACS-2.1.0.IDR2018-05-23 17:59 6.7M 
[ ]S2_Ecd_12h.merged.sorted.MACS-2.1.0.IDR-0.052018-05-23 19:35 801K 
[ ]S2_Ecd_12h.merged.sorted.MACS-2.1.0.IDR-0.102018-05-23 19:35 1.0M 
[IMG]S2_Ecd_12h.merged.sorted.MACS-2.1.0.IDR.png2018-05-23 17:59 527K 
[ ]S2_Ecd_12h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz2018-05-23 17:50 2.1M 
[ ]S2_Ecd_12h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.300K.gz2018-05-23 17:56 1.5M 
[ ]S2_Ecd_14h.merged.sorted.MACS-2.1.0.IDR2018-05-23 17:59 5.7M 
[ ]S2_Ecd_14h.merged.sorted.MACS-2.1.0.IDR-0.052018-05-23 19:35 798K 
[ ]S2_Ecd_14h.merged.sorted.MACS-2.1.0.IDR-0.102018-05-23 19:35 1.0M 
[IMG]S2_Ecd_14h.merged.sorted.MACS-2.1.0.IDR.png2018-05-23 17:59 529K 
[ ]S2_Ecd_14h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz2018-05-23 17:49 1.9M 
[ ]S2_Ecd_14h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.300K.gz2018-05-23 17:56 1.3M 
[ ]S2_no_Ecd_0h.merged.sorted.MACS-2.1.0.IDR2018-05-23 17:59 6.0M 
[ ]S2_no_Ecd_0h.merged.sorted.MACS-2.1.0.IDR-0.052018-05-23 19:35 686K 
[ ]S2_no_Ecd_0h.merged.sorted.MACS-2.1.0.IDR-0.102018-05-23 19:35 852K 
[IMG]S2_no_Ecd_0h.merged.sorted.MACS-2.1.0.IDR.png2018-05-23 17:59 540K 
[ ]S2_no_Ecd_0h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz2018-05-23 17:52 2.0M 
[ ]S2_no_Ecd_0h.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.300K.gz2018-05-23 17:56 1.4M 
[DIR]SAMstats-files/2018-05-23 19:37 -  
[ ]SAMstats.files2018-05-23 12:47 3.4K 
[ ]SAMstats.table2018-05-23 12:48 2.5K 
[DIR]clustering/2018-05-23 21:29 -  
[TXT]map.sh2018-05-22 18:19 8.7K 
[DIR]png/2018-05-23 12:26 -  
[ ]z2018-05-23 19:45 4.9K 
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