#	C methylated in CHG context:	C methylated in CHH context:	C methylated in CpG context:	C methylated in unknown context (CN or CHN):	CT/GA/CT:	CT/GA/GA:	GA/CT/CT:	GA/CT/GA:	Mapping efficiency:	Number of alignments to (merely theoretical) complementary strands being rejected in total:	Number of paired-end alignments with a unique best hit:	Sequence pairs analysed in total:	Sequence pairs did not map uniquely:	Sequence pairs which were discarded because genomic sequence could not be extracted:	Sequence pairs with no alignments under any condition:	Total methylated C's in CHG context:	Total methylated C's in CHH context:	Total methylated C's in CpG context:	Total methylated C's in Unknown context:	Total number of C's analysed:	Total unmethylated C's in CHG context:	Total unmethylated C's in CHH context:	Total unmethylated C's in CpG context:	Total unmethylated C's in Unknown context:
dnmt2-PGT45-GSM983095-Bismark_v0.19.0.bowtie1.drorep	0.5%	0.5%	0.5%	nan	2520680	3073260	0	0	5.0%	0	5593940	112104016	101158	2556	106408918	143160	404949	146479	nan	143128214	30268657	80082340	32082629	nan
dnmt2-PGT45-GSM983095-Bismark_v0.19.0.bowtie1.drorep.pbat	40.3%	77.4%	37.9%	nan	0	0	7144	5108	0.0%	nan	12252	112104016	9714	5	112082050	4946	169463	4878	nan	244153	7326	49559	7981	nan
dnmt2-PGT45-GSM983095-Bismark_v0.19.0.bowtie2.dm6	0.5%	0.5%	0.5%	0.3%	36779262	36968218	0	0	65.8%	0	73748281	112104016	16270023	801	22085712	1966160	5303909	2051298	868	1846497334	405683565	997561942	433930460	252960
dnmt2-PGT45-GSM983095-Bismark_v0.19.0.bowtie2.dm6.pbat	61.5%	71.4%	56.4%	45.8%	0	0	136388	93576	0.2%	nan	229972	112104016	415413	8	111458631	124897	2113990	187839	422	3498060	78238	847984	145112	499
dnmt2-PGT45-GSM983095-Bismark_v0.19.0.bowtie2.drorep.pbat	50.8%	76.7%	47.6%	47.6%	0	0	8226	9875	0.0%	nan	18101	98091014	41656	0	98031257	7574	272779	7337	20	386119	7348	82994	8087	22
w1118-PGT44-GSM983094-Bismark_v0.19.0.bowtie1.drorep	0.2%	0.2%	0.2%	nan	3885704	4702544	0	0	5.3%	0	8588248	163120500	203252	3909	154329000	90551	252039	99884	nan	215724945	45016106	122711081	47555284	nan
w1118-PGT44-GSM983094-Bismark_v0.19.0.bowtie1.drorep.pbat	40.7%	75.3%	36.7%	nan	0	0	11534	9538	0.0%	nan	21072	163120500	22744	15	163076684	5926	288454	5244	nan	411774	8621	94471	9058	nan
w1118-PGT44-GSM983094-Bismark_v0.19.0.bowtie2.dm6	0.2%	0.2%	0.2%	0.2%	52606753	52976555	0	0	64.7%	0	105584778	163120500	24371617	1470	33164105	1157670	3047950	1292424	611	2614370142	565304082	1440449903	603118113	370551
w1118-PGT44-GSM983094-Bismark_v0.19.0.bowtie2.dm6.pbat	45.8%	71.7%	46.1%	39.7%	0	0	151268	115514	0.2%	nan	266800	163120500	797618	18	162056082	74480	2756850	108939	627	4242726	88253	1086961	127243	953
w1118-PGT44-GSM983094-Bismark_v0.19.0.bowtie2.drorep.pbat	50.0%	71.4%	43.9%	55.4%	0	0	14251	26308	0.0%	nan	40562	163120500	130464	3	162949474	9827	534131	8250	41	786301	9825	213728	10540	33