2019-11-07 10:07:49,043:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:07:49,047:eu_debug: DRY RUN is enabled. 2019-11-07 10:07:49,047:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:07:49,047:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:07:49,324:eu_debug: submission=True: In submission mode. 2019-11-07 10:07:58,315:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:07:58,316:eu_debug: DRY RUN is enabled. 2019-11-07 10:07:58,316:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:07:58,317:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:07:58,543:eu_debug: submission=True: In submission mode. 2019-11-07 10:08:14,785:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:08:14,787:eu_debug: DRY RUN is enabled. 2019-11-07 10:08:14,787:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:08:14,787:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:08:15,014:eu_debug: submission=True: In submission mode. 2019-11-07 10:08:43,992:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:08:43,994:eu_debug: DRY RUN is enabled. 2019-11-07 10:08:43,994:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:08:43,994:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:08:44,238:eu_debug: submission=True: In submission mode. 2019-11-07 10:08:44,251:eu_debug: IN post(). 2019-11-07 10:08:44,252:eu_debug: <<<<<< POST biosample record will-greenleaf:some alias text To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:some alias text" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPR screen guideRNA modification" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:08:44,252:eu_debug: DRY RUN is enabled. 2019-11-07 10:13:06,164:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:13:06,165:eu_debug: DRY RUN is enabled. 2019-11-07 10:13:06,166:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:13:06,166:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:13:06,419:eu_debug: submission=True: In submission mode. 2019-11-07 10:13:06,430:eu_debug: IN post(). 2019-11-07 10:13:06,431:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRa-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRa-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRa" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:13:06,431:eu_debug: DRY RUN is enabled. 2019-11-07 10:13:07,667:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:13:07,669:eu_debug: DRY RUN is enabled. 2019-11-07 10:13:07,670:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:13:07,670:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:13:07,915:eu_debug: submission=True: In submission mode. 2019-11-07 10:13:07,927:eu_debug: IN post(). 2019-11-07 10:13:07,928:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRk-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRk-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRk" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:13:07,928:eu_debug: DRY RUN is enabled. 2019-11-07 10:13:09,198:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:13:09,200:eu_debug: DRY RUN is enabled. 2019-11-07 10:13:09,200:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:13:09,200:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:13:09,422:eu_debug: submission=True: In submission mode. 2019-11-07 10:13:09,435:eu_debug: IN post(). 2019-11-07 10:13:09,436:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRi-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRi-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRi" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:13:09,436:eu_debug: DRY RUN is enabled. 2019-11-07 10:13:10,738:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:13:10,739:eu_debug: DRY RUN is enabled. 2019-11-07 10:13:10,740:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:13:10,740:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:13:10,959:eu_debug: submission=True: In submission mode. 2019-11-07 10:13:10,971:eu_debug: IN post(). 2019-11-07 10:13:10,972:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRd" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:13:10,972:eu_debug: DRY RUN is enabled. 2019-11-07 10:13:24,233:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:13:24,235:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:13:24,235:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:13:24,476:eu_debug: submission=True: In submission mode. 2019-11-07 10:13:24,486:eu_debug: IN post(). 2019-11-07 10:13:24,487:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRa-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRa-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRa" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:13:24,599:eu_debug: Failed to POST will-greenleaf:CRISPRa-tiling 2019-11-07 10:13:24,599:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 10:13:24,599:eu_debug: { "@type": [ "CSRFTokenError", "Error" ], "code": 400, "description": "The server could not comply with the request since it is either malformed or otherwise incorrect.", "detail": "Missing CSRF token", "status": "error", "title": "Bad Request" } 2019-11-07 10:13:25,961:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:13:25,962:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:13:25,962:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:13:26,183:eu_debug: submission=True: In submission mode. 2019-11-07 10:13:26,193:eu_debug: IN post(). 2019-11-07 10:13:26,193:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRk-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRk-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRk" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:13:26,313:eu_debug: Failed to POST will-greenleaf:CRISPRk-tiling 2019-11-07 10:13:26,313:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 10:13:26,313:eu_debug: { "@type": [ "CSRFTokenError", "Error" ], "code": 400, "description": "The server could not comply with the request since it is either malformed or otherwise incorrect.", "detail": "Missing CSRF token", "status": "error", "title": "Bad Request" } 2019-11-07 10:13:27,581:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:13:27,583:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:13:27,583:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:13:27,825:eu_debug: submission=True: In submission mode. 2019-11-07 10:13:27,836:eu_debug: IN post(). 2019-11-07 10:13:27,837:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRi-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRi-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRi" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:13:27,949:eu_debug: Failed to POST will-greenleaf:CRISPRi-tiling 2019-11-07 10:13:27,950:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 10:13:27,950:eu_debug: { "@type": [ "CSRFTokenError", "Error" ], "code": 400, "description": "The server could not comply with the request since it is either malformed or otherwise incorrect.", "detail": "Missing CSRF token", "status": "error", "title": "Bad Request" } 2019-11-07 10:13:29,225:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:13:29,226:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:13:29,227:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:13:29,446:eu_debug: submission=True: In submission mode. 2019-11-07 10:13:29,457:eu_debug: IN post(). 2019-11-07 10:13:29,457:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRd" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:13:29,568:eu_debug: Failed to POST will-greenleaf:CRISPRd-tiling 2019-11-07 10:13:29,568:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 10:13:29,568:eu_debug: { "@type": [ "CSRFTokenError", "Error" ], "code": 400, "description": "The server could not comply with the request since it is either malformed or otherwise incorrect.", "detail": "Missing CSRF token", "status": "error", "title": "Bad Request" } 2019-11-07 10:13:42,873:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:13:42,875:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:13:42,875:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:13:43,096:eu_debug: submission=True: In submission mode. 2019-11-07 10:13:43,106:eu_debug: IN post(). 2019-11-07 10:13:43,107:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRd" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:13:43,220:eu_debug: Failed to POST will-greenleaf:CRISPRd-tiling 2019-11-07 10:13:43,221:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 10:13:43,221:eu_debug: { "@type": [ "CSRFTokenError", "Error" ], "code": 400, "description": "The server could not comply with the request since it is either malformed or otherwise incorrect.", "detail": "Missing CSRF token", "status": "error", "title": "Bad Request" } 2019-11-07 10:15:41,419:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:15:41,421:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:15:41,421:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:15:41,660:eu_debug: submission=True: In submission mode. 2019-11-07 10:15:41,671:eu_debug: IN post(). 2019-11-07 10:15:41,672:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRd" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:15:41,789:eu_debug: Failed to POST will-greenleaf:CRISPRd-tiling 2019-11-07 10:15:41,789:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 10:15:41,789:eu_debug: { "@type": [ "CSRFTokenError", "Error" ], "code": 400, "description": "The server could not comply with the request since it is either malformed or otherwise incorrect.", "detail": "Missing CSRF token", "status": "error", "title": "Bad Request" } 2019-11-07 10:16:04,397:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:16:04,399:eu_debug: DRY RUN is enabled. 2019-11-07 10:16:04,399:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:16:04,399:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:16:04,636:eu_debug: submission=True: In submission mode. 2019-11-07 10:16:04,648:eu_debug: IN post(). 2019-11-07 10:16:04,648:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRd" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:16:04,649:eu_debug: DRY RUN is enabled. 2019-11-07 10:16:19,275:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:16:19,276:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:16:19,277:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-07 10:16:19,495:eu_debug: submission=True: In submission mode. 2019-11-07 10:16:19,505:eu_debug: IN post(). 2019-11-07 10:16:19,506:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRd" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:16:19,624:eu_debug: Failed to POST will-greenleaf:CRISPRd-tiling 2019-11-07 10:16:19,625:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 10:16:19,625:eu_debug: { "@type": [ "CSRFTokenError", "Error" ], "code": 400, "description": "The server could not comply with the request since it is either malformed or otherwise incorrect.", "detail": "Missing CSRF token", "status": "error", "title": "Bad Request" } 2019-11-07 10:44:28,858:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:44:28,859:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:44:29,147:eu_debug: submission=True: In submission mode. 2019-11-07 10:44:29,158:eu_debug: IN post(). 2019-11-07 10:44:29,159:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRd" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:44:29,298:eu_debug: Failed to POST will-greenleaf:CRISPRd-tiling 2019-11-07 10:44:29,299:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 10:44:29,299:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'/labs/will-greenleaf/' is not in user submits_for", "location": "body", "name": [ "lab" ] }, { "description": "'nan' not found", "location": "body", "name": [ "source" ] }, { "description": "'will-greenleaf:CRISPRd' not found", "location": "body", "name": [ "genetic_modifications", 0 ] }, { "description": "'0' is not a 'date'", "location": "body", "name": [ "culture_harvest_date" ] }, { "description": "'0' is not a 'date'", "location": "body", "name": [ "culture_start_date" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-07 10:48:00,683:eu_debug: Connecting to test.encodedcc.org 2019-11-07 10:48:00,685:eu_debug: submission=False: In non-submission mode. 2019-11-07 10:48:00,975:eu_debug: submission=True: In submission mode. 2019-11-07 10:48:00,986:eu_debug: IN post(). 2019-11-07 10:48:00,987:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRd" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 10:48:01,129:eu_debug: Failed to POST will-greenleaf:CRISPRd-tiling 2019-11-07 10:48:01,130:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 10:48:01,130:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'/labs/will-greenleaf/' is not in user submits_for", "location": "body", "name": [ "lab" ] }, { "description": "'nan' not found", "location": "body", "name": [ "source" ] }, { "description": "'will-greenleaf:CRISPRd' not found", "location": "body", "name": [ "genetic_modifications", 0 ] }, { "description": "'0' is not a 'date'", "location": "body", "name": [ "culture_harvest_date" ] }, { "description": "'0' is not a 'date'", "location": "body", "name": [ "culture_start_date" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-07 11:02:19,720:eu_debug: Connecting to test.encodedcc.org 2019-11-07 11:02:19,721:eu_debug: submission=False: In non-submission mode. 2019-11-07 11:02:20,017:eu_debug: submission=True: In submission mode. 2019-11-07 11:02:20,027:eu_debug: IN post(). 2019-11-07 11:02:20,028:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "culture_harvest_date": "0", "culture_start_date": "0", "genetic_modifications": [ "will-greenleaf:CRISPRd" ], "lab": "/labs/will-greenleaf/", "organism": "human", "passage_number": 0, "source": "nan" } 2019-11-07 11:02:20,172:eu_debug: Failed to POST will-greenleaf:CRISPRd-tiling 2019-11-07 11:02:20,172:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-07 11:02:20,172:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'/labs/will-greenleaf/' is not in user submits_for", "location": "body", "name": [ "lab" ] }, { "description": "'nan' not found", "location": "body", "name": [ "source" ] }, { "description": "'will-greenleaf:CRISPRd' not found", "location": "body", "name": [ "genetic_modifications", 0 ] }, { "description": "'0' is not a 'date'", "location": "body", "name": [ "culture_harvest_date" ] }, { "description": "'0' is not a 'date'", "location": "body", "name": [ "culture_start_date" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-07 12:07:57,777:eu_debug: Connecting to test.encodedcc.org 2019-11-07 12:07:57,779:eu_debug: submission=False: In non-submission mode. 2019-11-07 12:07:58,069:eu_debug: submission=True: In submission mode. 2019-11-07 12:07:58,079:eu_debug: IN post(). 2019-11-07 12:07:58,079:eu_debug: <<<<<< POST biosample record will-greenleaf:CRISPRa-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:CRISPRa-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-07 12:07:58,231:eu_debug: Success. 2019-11-08 02:30:26,224:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:30:26,231:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:30:26,503:eu_debug: submission=True: In submission mode. 2019-11-08 02:30:26,514:eu_debug: IN post(). 2019-11-08 02:30:26,515:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRa-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 02:30:26,672:eu_debug: Success. 2019-11-08 02:30:26,673:eu_debug: IN post(). 2019-11-08 02:30:26,673:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRi-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 02:30:26,828:eu_debug: Success. 2019-11-08 02:30:26,829:eu_debug: IN post(). 2019-11-08 02:30:26,829:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRk-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 02:30:26,981:eu_debug: Success. 2019-11-08 02:30:26,981:eu_debug: IN post(). 2019-11-08 02:30:26,982:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRd-tiling To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 02:30:27,133:eu_debug: Success. 2019-11-08 02:31:41,157:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:31:41,158:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:31:41,451:eu_debug: submission=True: In submission mode. 2019-11-08 02:31:41,462:eu_debug: IN post(). 2019-11-08 02:31:41,463:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRa-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 02:31:41,607:eu_debug: Success. 2019-11-08 02:31:41,607:eu_debug: IN post(). 2019-11-08 02:31:41,607:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRi-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 02:31:41,742:eu_debug: Success. 2019-11-08 02:31:41,743:eu_debug: IN post(). 2019-11-08 02:31:41,743:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRd-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 02:31:41,879:eu_debug: Success. 2019-11-08 02:31:41,880:eu_debug: IN post(). 2019-11-08 02:31:41,880:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRk-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 02:31:42,020:eu_debug: Success. 2019-11-08 02:33:52,057:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:33:52,059:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:33:52,368:eu_debug: submission=True: In submission mode. 2019-11-08 02:33:52,379:eu_debug: IN post(). 2019-11-08 02:33:52,380:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "20" } 2019-11-08 02:33:52,510:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T14-R1 2019-11-08 02:33:52,510:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 02:33:52,510:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'20' does not match '(^[0-9]+-[0-9]+$|^[<>][0-9]+$)'", "location": "body", "name": [ "size_range" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 02:34:38,420:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:34:38,422:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:34:38,688:eu_debug: submission=True: In submission mode. 2019-11-08 02:34:38,700:eu_debug: IN post(). 2019-11-08 02:34:38,700:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:38,845:eu_debug: Success. 2019-11-08 02:34:38,845:eu_debug: IN post(). 2019-11-08 02:34:38,846:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:38,985:eu_debug: Success. 2019-11-08 02:34:38,985:eu_debug: IN post(). 2019-11-08 02:34:38,985:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRd-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRd-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:39,126:eu_debug: Success. 2019-11-08 02:34:39,126:eu_debug: IN post(). 2019-11-08 02:34:39,127:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRd-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRd-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:39,272:eu_debug: Success. 2019-11-08 02:34:39,272:eu_debug: IN post(). 2019-11-08 02:34:39,273:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRk-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRk-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:39,414:eu_debug: Success. 2019-11-08 02:34:39,415:eu_debug: IN post(). 2019-11-08 02:34:39,416:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRk-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRk-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:39,563:eu_debug: Success. 2019-11-08 02:34:39,563:eu_debug: IN post(). 2019-11-08 02:34:39,564:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRi-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRi-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:39,708:eu_debug: Success. 2019-11-08 02:34:39,708:eu_debug: IN post(). 2019-11-08 02:34:39,708:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRi-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRi-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:39,852:eu_debug: Success. 2019-11-08 02:34:39,852:eu_debug: IN post(). 2019-11-08 02:34:39,852:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:39,997:eu_debug: Success. 2019-11-08 02:34:39,997:eu_debug: IN post(). 2019-11-08 02:34:39,997:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRd-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRd-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:40,133:eu_debug: Success. 2019-11-08 02:34:40,133:eu_debug: IN post(). 2019-11-08 02:34:40,133:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRk-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRk-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:40,277:eu_debug: Success. 2019-11-08 02:34:40,277:eu_debug: IN post(). 2019-11-08 02:34:40,278:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRi-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRi-tiling", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 02:34:40,423:eu_debug: Success. 2019-11-08 02:37:16,194:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:37:16,195:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:37:16,467:eu_debug: submission=True: In submission mode. 2019-11-08 02:37:16,478:eu_debug: IN post(). 2019-11-08 02:37:16,479:eu_debug: <<<<<< POST replicate record l-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "l-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling-T0", "library": "will-greenleaf:K562-CRISPRa-tiling", "technical_replicate_number": 1 } 2019-11-08 02:37:16,606:eu_debug: Failed to POST l-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 02:37:16,606:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 02:37:16,607:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'l-greenleaf:K562-CRISPRa-tiling-T0' does not match \"^(?:alexander-hoffmann|alexander-rudensky|alexander-urban|ali-mortazavi|alkes-price|andrew-fire|anshul-kundaje|anton-valouev|axel-visel|barbara-wold|bill-noble|bin-yu|bing-ren|bradley-bernstein|brenton-graveley|charles-gersbach|chris-burge|christina-leslie|colin-dewey|david-gifford|david-gilbert|douglas-black|elliott-margulies|emery-bresnick|encode-awg|encode-consortium|encode-processing-pipeline|erez-aiden|erez-lieberman|eric-lecuyer|eric-mendehall|ewan-birney|feng-yue|gene-yeo|george-stamatoyannopoulos|greg-cooper|gregory-crawford|guo-cheng-yuan|haiyan-huang|haiyuan-yu|howard-chang|j-michael-cherry|jason-ernst|jason-lieb|jay-shendure|jennifer-harrow|jeremy-luban|job-dekker|joe-ecker|john-lis|john-rinn|john-stamatoyannopoulos|jonathan-pritchard|joseph-costello|kenneth-offit|kevin-struhl|kevin-white|ladeana-hillier|laura-elnitski|len-pennacchio|leonard-lipovich|manolis-kellis|manuel-garber|maria-ciofani|mark-gerstein|mats-ljungman|matteo-pellegrini|michael-bassik|michael-beer|michael-hoffman|michael-snyder|morgan-giddings|nadav-ahituv|pardis-sabeti|paul-khavari|peggy-farnham|peter-bickel|peter-park|piero-carninci|rafael-irizarry|richard-myers|roadmap-epigenomics|rob-spitale|robert-klein|robert-waterston|roderic-guigo|ross-hardison|ryan-tewhey|scott-tenenbaum|sherman-weissman|souma-raychaudhuri|stephen-smale|sunduz-keles|susan-celniker|thomas-gingeras|thomas-tullius|tim-reddy|timothy-hubbard|ting-wang|tommi-jaakkola|unknown|valerie-reinke|vishwanath-iyer|w-james-kent|wei-wang|will-greenleaf|xiang-dong-fu|xiaole-shirley|xinshu-xiao|yi-xing|yijun-ruan|yin-shen|yoav-gilad|zhiping-weng|brian-oliver|david-macalpine|hugo-bellen|peter-cherbas|terry-orr-weaver|abby-dernburg|anthony-hyman|arshad-desai|david-miller|eric-lai|fabio-piano|frank-slack|gary-karpen|gregory-hannon|james-posakony|john-kim|julie-ahringer|kamran-ahmad|kris-gunsalus|lincoln-stein|michael-brent|michael-maccoss|mitzi-kuroda|nikolaus-rajewsky|norbert-perrimon|philip-green|sarah-elgin|steven-henikoff|steven-russell|susan-strome|vincenzo-pirrotta|MitaniLab|UofC-HGAC|wesley-hung|encode|modern|dnanexus|modencode|gencode|ggr|cgc|bloomington|dssc|gtex|pgp|biochain|promocell|nichd|lonza|allcells):[a-zA-Z\\\\d_$.+!*,()'-]+(?:\\\\s[a-zA-Z\\\\d_$.+!*,()'-]+)*$\"", "location": "body", "name": [ "aliases", 0 ] }, { "description": "'will-greenleaf:K562-CRISPRa-tiling-T0' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] }, { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Library'", "location": "body", "name": [ "library" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 02:37:56,582:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:37:56,584:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:37:56,843:eu_debug: submission=True: In submission mode. 2019-11-08 02:37:56,856:eu_debug: IN post(). 2019-11-08 02:37:56,857:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling-T0", "library": "will-greenleaf:K562-CRISPRa-tiling", "technical_replicate_number": 1 } 2019-11-08 02:37:56,988:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 02:37:56,988:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 02:37:56,988:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling-T0' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] }, { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Library'", "location": "body", "name": [ "library" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 02:38:23,412:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:38:23,413:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:38:23,667:eu_debug: submission=True: In submission mode. 2019-11-08 02:38:23,678:eu_debug: IN post(). 2019-11-08 02:38:23,679:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling-T0", "library": "will-greenleaf:K562-CRISPRa-tiling", "technical_replicate_number": 1 } 2019-11-08 02:38:23,801:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 02:38:23,802:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 02:38:23,802:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling-T0' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] }, { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Library'", "location": "body", "name": [ "library" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 02:42:32,335:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:42:32,336:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:42:32,617:eu_debug: submission=True: In submission mode. 2019-11-08 02:42:47,533:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:42:47,535:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:42:47,789:eu_debug: submission=True: In submission mode. 2019-11-08 02:43:05,987:eu_debug: Connecting to test.encodedcc.org 2019-11-08 02:43:05,989:eu_debug: submission=False: In non-submission mode. 2019-11-08 02:43:06,249:eu_debug: submission=True: In submission mode. 2019-11-08 11:59:24,513:eu_debug: Connecting to test.encodedcc.org 2019-11-08 11:59:24,515:eu_debug: submission=False: In non-submission mode. 2019-11-08 11:59:24,859:eu_debug: submission=True: In submission mode. 2019-11-08 11:59:24,871:eu_debug: IN post(). 2019-11-08 11:59:24,871:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRa-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:guide RNA elements reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 11:59:25,022:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling 2019-11-08 11:59:25,022:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 11:59:25,023:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:guide RNA elements reference' not found", "location": "body", "name": [ "elements_references", 0 ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 12:08:22,086:eu_debug: Connecting to test.encodedcc.org 2019-11-08 12:08:22,087:eu_debug: submission=False: In non-submission mode. 2019-11-08 12:08:22,368:eu_debug: submission=True: In submission mode. 2019-11-08 12:08:22,379:eu_debug: IN post(). 2019-11-08 12:08:22,380:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRa-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 12:08:22,539:eu_debug: {'code': 409, 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling')]"} 2019-11-08 12:08:22,540:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling/?format=json&datastore=database 2019-11-08 12:08:22,764:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling']'. 2019-11-08 12:08:22,765:eu_debug: IN post(). 2019-11-08 12:08:22,766:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRd-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 12:08:22,932:eu_debug: {'code': 409, 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling')]"} 2019-11-08 12:08:22,933:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling/?format=json&datastore=database 2019-11-08 12:08:23,170:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling']'. 2019-11-08 12:08:23,171:eu_debug: IN post(). 2019-11-08 12:08:23,171:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRk-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 12:08:23,329:eu_debug: {'code': 409, 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling')]"} 2019-11-08 12:08:23,330:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling/?format=json&datastore=database 2019-11-08 12:08:23,560:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling']'. 2019-11-08 12:08:23,560:eu_debug: IN post(). 2019-11-08 12:08:23,561:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRi-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 12:08:23,722:eu_debug: {'code': 409, 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling')]"} 2019-11-08 12:08:23,722:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling/?format=json&datastore=database 2019-11-08 12:08:23,956:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling']'. 2019-11-08 12:08:59,013:eu_debug: Connecting to test.encodedcc.org 2019-11-08 12:08:59,015:eu_debug: submission=False: In non-submission mode. 2019-11-08 12:08:59,303:eu_debug: submission=True: In submission mode. 2019-11-08 12:08:59,314:eu_debug: IN post(). 2019-11-08 12:08:59,315:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling-T0", "library": "will-greenleaf:K562-CRISPRa-tiling", "technical_replicate_number": 1 } 2019-11-08 12:08:59,453:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 12:08:59,454:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 12:08:59,454:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling-T0' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] }, { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Library'", "location": "body", "name": [ "library" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 12:17:42,195:eu_debug: Connecting to test.encodedcc.org 2019-11-08 12:17:42,196:eu_debug: submission=False: In non-submission mode. 2019-11-08 12:17:42,466:eu_debug: submission=True: In submission mode. 2019-11-08 12:17:42,477:eu_debug: IN post(). 2019-11-08 12:17:42,478:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling", "library": "will-greenleaf:K562-CRISPRa-tiling-T0", "technical_replicate_number": 1 } 2019-11-08 12:17:42,617:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 12:17:42,617:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 12:17:42,617:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 12:26:23,457:eu_debug: Connecting to test.encodedcc.org 2019-11-08 12:26:23,461:eu_debug: submission=False: In non-submission mode. 2019-11-08 12:26:23,734:eu_debug: submission=True: In submission mode. 2019-11-08 12:26:23,745:eu_debug: IN post(). 2019-11-08 12:26:23,746:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling", "library": "will-greenleaf:K562-CRISPRa-tiling", "technical_replicate_number": 1 } 2019-11-08 12:26:23,882:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 12:26:23,882:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 12:26:23,883:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] }, { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Library'", "location": "body", "name": [ "library" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 12:26:56,120:eu_debug: Connecting to test.encodedcc.org 2019-11-08 12:26:56,121:eu_debug: submission=False: In non-submission mode. 2019-11-08 12:26:56,387:eu_debug: submission=True: In submission mode. 2019-11-08 12:26:56,398:eu_debug: IN post(). 2019-11-08 12:26:56,399:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling", "library": "will-greenleaf:K562-CRISPRa-tiling-T0", "technical_replicate_number": 1 } 2019-11-08 12:26:56,541:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 12:26:56,541:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 12:26:56,541:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 12:27:09,601:eu_debug: Connecting to test.encodedcc.org 2019-11-08 12:27:09,603:eu_debug: submission=False: In non-submission mode. 2019-11-08 12:27:09,902:eu_debug: submission=True: In submission mode. 2019-11-08 12:27:09,913:eu_debug: IN post(). 2019-11-08 12:27:09,913:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRa-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 12:27:10,074:eu_debug: {'title': 'Conflict', 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling')]"} 2019-11-08 12:27:10,074:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling/?format=json&datastore=database 2019-11-08 12:27:10,294:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling']'. 2019-11-08 12:27:10,295:eu_debug: IN post(). 2019-11-08 12:27:10,295:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRd-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 12:27:10,450:eu_debug: {'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409} 2019-11-08 12:27:10,451:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling/?format=json&datastore=database 2019-11-08 12:27:10,676:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling']'. 2019-11-08 12:27:10,677:eu_debug: IN post(). 2019-11-08 12:27:10,677:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRk-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 12:27:10,835:eu_debug: {'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409} 2019-11-08 12:27:10,836:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling/?format=json&datastore=database 2019-11-08 12:27:11,065:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling']'. 2019-11-08 12:27:11,065:eu_debug: IN post(). 2019-11-08 12:27:11,066:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRi-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 12:27:11,221:eu_debug: {'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409} 2019-11-08 12:27:11,221:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling/?format=json&datastore=database 2019-11-08 12:27:11,448:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling']'. 2019-11-08 12:27:26,500:eu_debug: Connecting to test.encodedcc.org 2019-11-08 12:27:26,501:eu_debug: submission=False: In non-submission mode. 2019-11-08 12:27:26,806:eu_debug: submission=True: In submission mode. 2019-11-08 12:27:26,817:eu_debug: IN post(). 2019-11-08 12:27:26,818:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling", "library": "will-greenleaf:K562-CRISPRa-tiling-T0", "technical_replicate_number": 1 } 2019-11-08 12:27:26,956:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 12:27:26,956:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 12:27:26,957:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 12:29:13,324:eu_debug: Connecting to test.encodedcc.org 2019-11-08 12:29:13,325:eu_debug: submission=False: In non-submission mode. 2019-11-08 12:29:13,603:eu_debug: submission=True: In submission mode. 2019-11-08 12:29:13,615:eu_debug: IN post(). 2019-11-08 12:29:13,616:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling", "library": "will-greenleaf:K562-CRISPRa-tiling-T0", "technical_replicate_number": 1 } 2019-11-08 12:29:13,753:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 12:29:13,753:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 12:29:13,753:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 12:32:42,824:eu_debug: Connecting to test.encodedcc.org 2019-11-08 12:32:42,825:eu_debug: submission=False: In non-submission mode. 2019-11-08 12:32:43,113:eu_debug: submission=True: In submission mode. 2019-11-08 13:33:37,288:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:33:37,289:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:33:37,576:eu_debug: submission=True: In submission mode. 2019-11-08 13:33:37,589:eu_debug: IN post(). 2019-11-08 13:33:37,590:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRa-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:33:37,743:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling')]", 'code': 409, 'title': 'Conflict'} 2019-11-08 13:33:37,744:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling/?format=json&datastore=database 2019-11-08 13:33:37,967:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling']'. 2019-11-08 13:33:37,967:eu_debug: IN post(). 2019-11-08 13:33:37,968:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRd-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRd-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:33:38,120:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling')]", 'code': 409, 'title': 'Conflict'} 2019-11-08 13:33:38,121:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling/?format=json&datastore=database 2019-11-08 13:33:38,346:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling']'. 2019-11-08 13:33:38,346:eu_debug: IN post(). 2019-11-08 13:33:38,347:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRk-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRk-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:33:38,507:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling')]", 'code': 409, 'title': 'Conflict'} 2019-11-08 13:33:38,508:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling/?format=json&datastore=database 2019-11-08 13:33:38,740:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling']'. 2019-11-08 13:33:38,740:eu_debug: IN post(). 2019-11-08 13:33:38,741:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRi-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRi-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:33:38,902:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling')]", 'code': 409, 'title': 'Conflict'} 2019-11-08 13:33:38,902:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling/?format=json&datastore=database 2019-11-08 13:33:39,136:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling']'. 2019-11-08 13:33:43,237:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:33:43,239:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:33:43,533:eu_debug: submission=True: In submission mode. 2019-11-08 13:50:25,804:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:50:25,806:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:50:26,080:eu_debug: submission=True: In submission mode. 2019-11-08 13:50:26,093:eu_debug: IN post(). 2019-11-08 13:50:26,093:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRa-tiling-screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 13:50:26,253:eu_debug: Success. 2019-11-08 13:50:26,254:eu_debug: IN post(). 2019-11-08 13:50:26,254:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRi-tiling-screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 13:50:26,416:eu_debug: Success. 2019-11-08 13:50:26,417:eu_debug: IN post(). 2019-11-08 13:50:26,417:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRk-tiling-screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 13:50:26,587:eu_debug: Success. 2019-11-08 13:50:26,588:eu_debug: IN post(). 2019-11-08 13:50:26,588:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRd-tiling-screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 13:50:26,751:eu_debug: Success. 2019-11-08 13:50:30,754:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:50:30,755:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:50:31,034:eu_debug: submission=True: In submission mode. 2019-11-08 13:50:31,045:eu_debug: IN post(). 2019-11-08 13:50:31,046:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRa-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 13:50:31,200:eu_debug: {'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling-reference')]", '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'description': 'There was a conflict when trying to complete your request.', 'status': 'error'} 2019-11-08 13:50:31,200:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling-reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling-reference/?format=json&datastore=database 2019-11-08 13:50:31,408:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling-reference' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling-reference']'. 2019-11-08 13:50:31,408:eu_debug: IN post(). 2019-11-08 13:50:31,409:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRi-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 13:50:31,564:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling-reference')]", '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error'} 2019-11-08 13:50:31,564:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling-reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling-reference/?format=json&datastore=database 2019-11-08 13:50:31,776:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling-reference' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling-reference']'. 2019-11-08 13:50:31,776:eu_debug: IN post(). 2019-11-08 13:50:31,777:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRd-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 13:50:31,925:eu_debug: {'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling-reference')]", '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'description': 'There was a conflict when trying to complete your request.', 'status': 'error'} 2019-11-08 13:50:31,926:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling-reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling-reference/?format=json&datastore=database 2019-11-08 13:50:32,139:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling-reference' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling-reference']'. 2019-11-08 13:50:32,140:eu_debug: IN post(). 2019-11-08 13:50:32,140:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRk-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 13:50:32,295:eu_debug: {'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling-reference')]", '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'description': 'There was a conflict when trying to complete your request.', 'status': 'error'} 2019-11-08 13:50:32,295:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling-reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling-reference/?format=json&datastore=database 2019-11-08 13:50:32,507:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling-reference' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling-reference']'. 2019-11-08 13:50:41,590:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:50:41,592:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:50:41,868:eu_debug: submission=True: In submission mode. 2019-11-08 13:50:41,880:eu_debug: IN post(). 2019-11-08 13:50:41,880:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:42,037:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling-T14-R1')]", 'code': 409} 2019-11-08 13:50:42,038:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling-T14-R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling-T14-R1/?format=json&datastore=database 2019-11-08 13:50:42,246:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling-T14-R1' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling-T14-R1']'. 2019-11-08 13:50:42,247:eu_debug: IN post(). 2019-11-08 13:50:42,247:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:42,401:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling-T14-R2')]"} 2019-11-08 13:50:42,401:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling-T14-R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling-T14-R2/?format=json&datastore=database 2019-11-08 13:50:42,607:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling-T14-R2' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling-T14-R2']'. 2019-11-08 13:50:42,607:eu_debug: IN post(). 2019-11-08 13:50:42,607:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRd-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRd-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:42,760:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling-T14-R1')]"} 2019-11-08 13:50:42,761:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling-T14-R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling-T14-R1/?format=json&datastore=database 2019-11-08 13:50:42,959:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling-T14-R1' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling-T14-R1']'. 2019-11-08 13:50:42,959:eu_debug: IN post(). 2019-11-08 13:50:42,960:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRd-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRd-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:43,115:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling-T14-R2')]"} 2019-11-08 13:50:43,115:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling-T14-R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling-T14-R2/?format=json&datastore=database 2019-11-08 13:50:43,319:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling-T14-R2' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling-T14-R2']'. 2019-11-08 13:50:43,319:eu_debug: IN post(). 2019-11-08 13:50:43,320:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRk-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRk-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:43,475:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling-T14-R1')]", 'code': 409} 2019-11-08 13:50:43,475:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling-T14-R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling-T14-R1/?format=json&datastore=database 2019-11-08 13:50:43,688:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling-T14-R1' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling-T14-R1']'. 2019-11-08 13:50:43,688:eu_debug: IN post(). 2019-11-08 13:50:43,688:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRk-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRk-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:43,845:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling-T14-R2')]", 'code': 409} 2019-11-08 13:50:43,846:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling-T14-R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling-T14-R2/?format=json&datastore=database 2019-11-08 13:50:44,055:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling-T14-R2' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling-T14-R2']'. 2019-11-08 13:50:44,056:eu_debug: IN post(). 2019-11-08 13:50:44,056:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRi-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRi-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:44,202:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling-T14-R1')]", 'code': 409} 2019-11-08 13:50:44,202:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling-T14-R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling-T14-R1/?format=json&datastore=database 2019-11-08 13:50:44,412:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling-T14-R1' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling-T14-R1']'. 2019-11-08 13:50:44,412:eu_debug: IN post(). 2019-11-08 13:50:44,413:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRi-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRi-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:44,568:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling-T14-R2')]", 'code': 409} 2019-11-08 13:50:44,569:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling-T14-R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling-T14-R2/?format=json&datastore=database 2019-11-08 13:50:44,773:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling-T14-R2' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling-T14-R2']'. 2019-11-08 13:50:44,773:eu_debug: IN post(). 2019-11-08 13:50:44,774:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:44,935:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling-T0')]", 'code': 409} 2019-11-08 13:50:44,935:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling-T0/?format=json&datastore=database 2019-11-08 13:50:45,153:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling-T0' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling-T0']'. 2019-11-08 13:50:45,153:eu_debug: IN post(). 2019-11-08 13:50:45,154:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRd-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRd-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:45,305:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling-T0')]", 'code': 409} 2019-11-08 13:50:45,305:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling-T0/?format=json&datastore=database 2019-11-08 13:50:45,522:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling-T0' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling-T0']'. 2019-11-08 13:50:45,522:eu_debug: IN post(). 2019-11-08 13:50:45,523:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRk-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRk-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:45,675:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling-T0')]"} 2019-11-08 13:50:45,675:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling-T0/?format=json&datastore=database 2019-11-08 13:50:45,887:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling-T0' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling-T0']'. 2019-11-08 13:50:45,888:eu_debug: IN post(). 2019-11-08 13:50:45,888:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRi-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRi-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:50:46,049:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling-T0')]", 'code': 409} 2019-11-08 13:50:46,049:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling-T0/?format=json&datastore=database 2019-11-08 13:50:46,261:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling-T0' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling-T0']'. 2019-11-08 13:50:50,288:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:50:50,290:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:50:50,555:eu_debug: submission=True: In submission mode. 2019-11-08 13:51:09,589:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:51:09,591:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:51:09,878:eu_debug: submission=True: In submission mode. 2019-11-08 13:51:09,888:eu_debug: IN post(). 2019-11-08 13:51:09,888:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRa-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:51:10,047:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling')]", 'title': 'Conflict', 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-08 13:51:10,047:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling/?format=json&datastore=database 2019-11-08 13:51:10,621:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling']'. 2019-11-08 13:51:10,622:eu_debug: IN post(). 2019-11-08 13:51:10,623:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRd-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRd-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:51:10,784:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling')]", 'description': 'There was a conflict when trying to complete your request.', 'code': 409, 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-08 13:51:10,784:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling/?format=json&datastore=database 2019-11-08 13:51:11,010:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling']'. 2019-11-08 13:51:11,011:eu_debug: IN post(). 2019-11-08 13:51:11,011:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRk-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRk-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:51:11,169:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling')]", 'description': 'There was a conflict when trying to complete your request.', 'code': 409, 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-08 13:51:11,169:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling/?format=json&datastore=database 2019-11-08 13:51:11,411:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling']'. 2019-11-08 13:51:11,411:eu_debug: IN post(). 2019-11-08 13:51:11,412:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRi-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRi-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:51:11,570:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling')]", 'description': 'There was a conflict when trying to complete your request.', 'code': 409, 'title': 'Conflict', 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-08 13:51:11,571:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling/?format=json&datastore=database 2019-11-08 13:51:11,802:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling']'. 2019-11-08 13:51:16,626:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:51:16,628:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:51:16,915:eu_debug: submission=True: In submission mode. 2019-11-08 13:51:35,238:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:51:35,240:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:51:35,527:eu_debug: submission=True: In submission mode. 2019-11-08 13:51:35,540:eu_debug: IN post(). 2019-11-08 13:51:35,541:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling", "library": "will-greenleaf:K562-CRISPRa-tiling-T0", "technical_replicate_number": 1 } 2019-11-08 13:51:35,680:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 13:51:35,680:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 13:51:35,680:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-08 13:53:24,049:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:53:24,050:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:53:24,348:eu_debug: submission=True: In submission mode. 2019-11-08 13:53:24,359:eu_debug: IN post(). 2019-11-08 13:53:24,360:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRa-tiling-screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 13:53:24,528:eu_debug: {'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling-screen')]"} 2019-11-08 13:53:24,528:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling-screen From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling-screen/?format=json&datastore=database 2019-11-08 13:53:24,764:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling-screen' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling-screen']'. 2019-11-08 13:53:24,764:eu_debug: IN post(). 2019-11-08 13:53:24,765:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRi-tiling-screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 13:53:24,917:eu_debug: {'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling-screen')]"} 2019-11-08 13:53:24,917:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling-screen From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling-screen/?format=json&datastore=database 2019-11-08 13:53:25,141:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling-screen' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling-screen']'. 2019-11-08 13:53:25,141:eu_debug: IN post(). 2019-11-08 13:53:25,142:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRk-tiling-screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 13:53:25,303:eu_debug: {'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'status': 'error', 'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling-screen')]"} 2019-11-08 13:53:25,304:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling-screen From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling-screen/?format=json&datastore=database 2019-11-08 13:53:25,533:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling-screen' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling-screen']'. 2019-11-08 13:53:25,534:eu_debug: IN post(). 2019-11-08 13:53:25,534:eu_debug: <<<<<< POST biosample record will-greenleaf:K562-CRISPRd-tiling-screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-08 13:53:25,694:eu_debug: {'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling-screen')]", 'title': 'Conflict'} 2019-11-08 13:53:25,695:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling-screen From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling-screen/?format=json&datastore=database 2019-11-08 13:53:25,924:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling-screen' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling-screen']'. 2019-11-08 13:53:28,265:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:53:28,267:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:53:28,534:eu_debug: submission=True: In submission mode. 2019-11-08 13:53:28,545:eu_debug: IN post(). 2019-11-08 13:53:28,545:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRa-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 13:53:28,698:eu_debug: {'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling-reference')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409} 2019-11-08 13:53:28,698:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling-reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling-reference/?format=json&datastore=database 2019-11-08 13:53:28,907:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling-reference' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling-reference']'. 2019-11-08 13:53:28,907:eu_debug: IN post(). 2019-11-08 13:53:28,908:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRi-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 13:53:29,064:eu_debug: {'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling-reference')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409} 2019-11-08 13:53:29,064:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling-reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling-reference/?format=json&datastore=database 2019-11-08 13:53:29,267:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling-reference' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling-reference']'. 2019-11-08 13:53:29,267:eu_debug: IN post(). 2019-11-08 13:53:29,268:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRd-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 13:53:29,408:eu_debug: {'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling-reference')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409} 2019-11-08 13:53:29,408:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling-reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling-reference/?format=json&datastore=database 2019-11-08 13:53:29,613:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling-reference' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling-reference']'. 2019-11-08 13:53:29,613:eu_debug: IN post(). 2019-11-08 13:53:29,614:eu_debug: <<<<<< POST reference record will-greenleaf:K562-CRISPRk-tiling-reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-08 13:53:29,761:eu_debug: {'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling-reference')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409} 2019-11-08 13:53:29,762:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling-reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling-reference/?format=json&datastore=database 2019-11-08 13:53:29,971:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling-reference' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling-reference']'. 2019-11-08 13:53:31,829:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:53:31,831:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:53:32,099:eu_debug: submission=True: In submission mode. 2019-11-08 13:53:32,109:eu_debug: IN post(). 2019-11-08 13:53:32,110:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:32,269:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling-T14-R1')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:32,269:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling-T14-R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling-T14-R1/?format=json&datastore=database 2019-11-08 13:53:32,479:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling-T14-R1' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling-T14-R1']'. 2019-11-08 13:53:32,479:eu_debug: IN post(). 2019-11-08 13:53:32,480:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:32,634:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling-T14-R2')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:32,635:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling-T14-R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling-T14-R2/?format=json&datastore=database 2019-11-08 13:53:32,839:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling-T14-R2' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling-T14-R2']'. 2019-11-08 13:53:32,839:eu_debug: IN post(). 2019-11-08 13:53:32,840:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRd-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRd-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:32,993:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling-T14-R1')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:32,993:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling-T14-R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling-T14-R1/?format=json&datastore=database 2019-11-08 13:53:33,205:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling-T14-R1' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling-T14-R1']'. 2019-11-08 13:53:33,206:eu_debug: IN post(). 2019-11-08 13:53:33,206:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRd-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRd-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:33,368:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling-T14-R2')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:33,368:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling-T14-R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling-T14-R2/?format=json&datastore=database 2019-11-08 13:53:33,579:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling-T14-R2' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling-T14-R2']'. 2019-11-08 13:53:33,579:eu_debug: IN post(). 2019-11-08 13:53:33,579:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRk-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRk-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:33,729:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling-T14-R1')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:33,729:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling-T14-R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling-T14-R1/?format=json&datastore=database 2019-11-08 13:53:33,944:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling-T14-R1' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling-T14-R1']'. 2019-11-08 13:53:33,944:eu_debug: IN post(). 2019-11-08 13:53:33,945:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRk-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRk-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:34,095:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling-T14-R2')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:34,095:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling-T14-R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling-T14-R2/?format=json&datastore=database 2019-11-08 13:53:34,301:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling-T14-R2' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling-T14-R2']'. 2019-11-08 13:53:34,301:eu_debug: IN post(). 2019-11-08 13:53:34,301:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRi-tiling-T14-R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-T14-R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRi-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:34,456:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling-T14-R1')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:34,456:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling-T14-R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling-T14-R1/?format=json&datastore=database 2019-11-08 13:53:34,658:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling-T14-R1' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling-T14-R1']'. 2019-11-08 13:53:34,659:eu_debug: IN post(). 2019-11-08 13:53:34,659:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRi-tiling-T14-R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-T14-R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRi-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:34,816:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling-T14-R2')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:34,816:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling-T14-R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling-T14-R2/?format=json&datastore=database 2019-11-08 13:53:35,022:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling-T14-R2' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling-T14-R2']'. 2019-11-08 13:53:35,024:eu_debug: IN post(). 2019-11-08 13:53:35,025:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRa-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:35,180:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling-T0')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:35,180:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling-T0/?format=json&datastore=database 2019-11-08 13:53:35,392:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling-T0' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling-T0']'. 2019-11-08 13:53:35,393:eu_debug: IN post(). 2019-11-08 13:53:35,393:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRd-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRd-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:35,545:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling-T0')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:35,545:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling-T0/?format=json&datastore=database 2019-11-08 13:53:35,763:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling-T0' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling-T0']'. 2019-11-08 13:53:35,763:eu_debug: IN post(). 2019-11-08 13:53:35,763:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRk-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRk-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:35,917:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling-T0')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:35,917:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling-T0/?format=json&datastore=database 2019-11-08 13:53:36,130:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling-T0' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling-T0']'. 2019-11-08 13:53:36,131:eu_debug: IN post(). 2019-11-08 13:53:36,132:eu_debug: <<<<<< POST library record will-greenleaf:K562-CRISPRi-tiling-T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling-T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562-CRISPRi-tiling-screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-08 13:53:36,290:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling-T0')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-08 13:53:36,290:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling-T0/?format=json&datastore=database 2019-11-08 13:53:36,499:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling-T0' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling-T0']'. 2019-11-08 13:53:38,840:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:53:38,842:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:53:39,109:eu_debug: submission=True: In submission mode. 2019-11-08 13:53:39,120:eu_debug: IN post(). 2019-11-08 13:53:39,121:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRa-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRa-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:53:39,275:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRa-tiling')]", '@type': ['HTTPConflict', 'Error'], 'status': 'error'} 2019-11-08 13:53:39,276:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRa-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRa-tiling/?format=json&datastore=database 2019-11-08 13:53:39,502:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRa-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRa-tiling']'. 2019-11-08 13:53:39,503:eu_debug: IN post(). 2019-11-08 13:53:39,503:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRd-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRd-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRd-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:53:39,653:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRd-tiling')]", '@type': ['HTTPConflict', 'Error'], 'status': 'error'} 2019-11-08 13:53:39,653:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRd-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRd-tiling/?format=json&datastore=database 2019-11-08 13:53:39,887:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRd-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRd-tiling']'. 2019-11-08 13:53:39,887:eu_debug: IN post(). 2019-11-08 13:53:39,888:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRk-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRk-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRk-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:53:40,048:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRk-tiling')]", '@type': ['HTTPConflict', 'Error'], 'status': 'error'} 2019-11-08 13:53:40,049:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRk-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRk-tiling/?format=json&datastore=database 2019-11-08 13:53:40,278:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRk-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRk-tiling']'. 2019-11-08 13:53:40,278:eu_debug: IN post(). 2019-11-08 13:53:40,279:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562-CRISPRi-tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRi-tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562-CRISPRi-tiling-reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-08 13:53:40,437:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562-CRISPRi-tiling')]", '@type': ['HTTPConflict', 'Error'], 'status': 'error'} 2019-11-08 13:53:40,437:eu_debug: >>>>>>GET will-greenleaf:K562-CRISPRi-tiling From DCC with URL https://test.encodedcc.org/will-greenleaf:K562-CRISPRi-tiling/?format=json&datastore=database 2019-11-08 13:53:40,669:eu_debug: Will not POST 'will-greenleaf:K562-CRISPRi-tiling' since it already exists with aliases '['will-greenleaf:K562-CRISPRi-tiling']'. 2019-11-08 13:53:43,163:eu_debug: Connecting to test.encodedcc.org 2019-11-08 13:53:43,164:eu_debug: submission=False: In non-submission mode. 2019-11-08 13:53:43,453:eu_debug: submission=True: In submission mode. 2019-11-08 13:53:43,464:eu_debug: IN post(). 2019-11-08 13:53:43,465:eu_debug: <<<<<< POST replicate record will-greenleaf:K562-CRISPRa-tiling-T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562-CRISPRa-tiling-T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562-CRISPRa-tiling", "library": "will-greenleaf:K562-CRISPRa-tiling-T0", "technical_replicate_number": 1 } 2019-11-08 13:53:43,606:eu_debug: Failed to POST will-greenleaf:K562-CRISPRa-tiling-T0 2019-11-08 13:53:43,606:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-08 13:53:43,606:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562-CRISPRa-tiling' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 12:40:13,360:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:40:13,385:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:40:13,723:eu_debug: submission=True: In submission mode. 2019-11-11 12:40:13,737:eu_debug: IN post(). 2019-11-11 12:40:13,737:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-11 12:40:13,908:eu_debug: Success. 2019-11-11 12:40:13,908:eu_debug: IN post(). 2019-11-11 12:40:13,909:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-11 12:40:14,077:eu_debug: Success. 2019-11-11 12:40:14,078:eu_debug: IN post(). 2019-11-11 12:40:14,079:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-11 12:40:14,251:eu_debug: Success. 2019-11-11 12:40:14,252:eu_debug: IN post(). 2019-11-11 12:40:14,253:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-11 12:40:14,419:eu_debug: Success. 2019-11-11 12:40:18,290:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:40:18,293:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:40:18,566:eu_debug: submission=True: In submission mode. 2019-11-11 12:40:18,579:eu_debug: IN post(). 2019-11-11 12:40:18,579:eu_debug: <<<<<< POST reference record will-greenleaf:K562_CRISPRa_tiling_reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-11 12:40:18,735:eu_debug: Success. 2019-11-11 12:40:18,735:eu_debug: IN post(). 2019-11-11 12:40:18,736:eu_debug: <<<<<< POST reference record will-greenleaf:K562_CRISPRi_tiling_reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-11 12:40:18,893:eu_debug: Success. 2019-11-11 12:40:18,893:eu_debug: IN post(). 2019-11-11 12:40:18,894:eu_debug: <<<<<< POST reference record will-greenleaf:K562_CRISPRd_tiling_reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-11 12:40:19,054:eu_debug: Success. 2019-11-11 12:40:19,054:eu_debug: IN post(). 2019-11-11 12:40:19,055:eu_debug: <<<<<< POST reference record will-greenleaf:K562_CRISPRk_tiling_reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-11 12:40:19,217:eu_debug: Success. 2019-11-11 12:40:23,132:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:40:23,133:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:40:23,430:eu_debug: submission=True: In submission mode. 2019-11-11 12:40:23,443:eu_debug: IN post(). 2019-11-11 12:40:23,444:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14_R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:23,602:eu_debug: Success. 2019-11-11 12:40:23,603:eu_debug: IN post(). 2019-11-11 12:40:23,604:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14_R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:23,758:eu_debug: Success. 2019-11-11 12:40:23,758:eu_debug: IN post(). 2019-11-11 12:40:23,759:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14_R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:23,921:eu_debug: Success. 2019-11-11 12:40:23,921:eu_debug: IN post(). 2019-11-11 12:40:23,922:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14_R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:24,086:eu_debug: Success. 2019-11-11 12:40:24,086:eu_debug: IN post(). 2019-11-11 12:40:24,087:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14_R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:24,242:eu_debug: Success. 2019-11-11 12:40:24,242:eu_debug: IN post(). 2019-11-11 12:40:24,243:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14_R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:24,406:eu_debug: Success. 2019-11-11 12:40:24,406:eu_debug: IN post(). 2019-11-11 12:40:24,407:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14_R1 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:24,560:eu_debug: Success. 2019-11-11 12:40:24,561:eu_debug: IN post(). 2019-11-11 12:40:24,561:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14_R2 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:24,719:eu_debug: Success. 2019-11-11 12:40:24,720:eu_debug: IN post(). 2019-11-11 12:40:24,720:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:24,879:eu_debug: Success. 2019-11-11 12:40:24,879:eu_debug: IN post(). 2019-11-11 12:40:24,880:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:25,036:eu_debug: Success. 2019-11-11 12:40:25,036:eu_debug: IN post(). 2019-11-11 12:40:25,036:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:25,199:eu_debug: Success. 2019-11-11 12:40:25,200:eu_debug: IN post(). 2019-11-11 12:40:25,200:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T0 To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen", "fragmentation_methods": [ "none" ], "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA", "size_range": "16-20" } 2019-11-11 12:40:25,355:eu_debug: Success. 2019-11-11 12:40:29,535:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:40:29,536:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:40:29,826:eu_debug: submission=True: In submission mode. 2019-11-11 12:40:29,837:eu_debug: IN post(). 2019-11-11 12:40:29,838:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPRa_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-11 12:40:29,987:eu_debug: Success. 2019-11-11 12:40:29,988:eu_debug: IN post(). 2019-11-11 12:40:29,988:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPRd_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-11 12:40:30,148:eu_debug: Success. 2019-11-11 12:40:30,149:eu_debug: IN post(). 2019-11-11 12:40:30,149:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPRk_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-11 12:40:30,310:eu_debug: Success. 2019-11-11 12:40:30,310:eu_debug: IN post(). 2019-11-11 12:40:30,311:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPRi_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-11 12:40:30,470:eu_debug: Success. 2019-11-11 12:40:35,260:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:40:35,262:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:40:35,529:eu_debug: submission=True: In submission mode. 2019-11-11 12:40:35,542:eu_debug: IN post(). 2019-11-11 12:40:35,543:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:40:35,699:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T0')]", 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-11 12:40:35,699:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T0/?format=json&datastore=database 2019-11-11 12:40:35,912:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T0']'. 2019-11-11 12:40:35,913:eu_debug: IN post(). 2019-11-11 12:40:35,913:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling", "library": "will-greenleaf:K562_CRISPRd_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:40:36,071:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T0')]", 'title': 'Conflict', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'status': 'error'} 2019-11-11 12:40:36,071:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T0/?format=json&datastore=database 2019-11-11 12:40:36,280:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T0']'. 2019-11-11 12:40:36,280:eu_debug: IN post(). 2019-11-11 12:40:36,281:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling", "library": "will-greenleaf:K562_CRISPRk_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:40:36,430:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T0')]", 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-11 12:40:36,430:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T0/?format=json&datastore=database 2019-11-11 12:40:36,644:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T0']'. 2019-11-11 12:40:36,644:eu_debug: IN post(). 2019-11-11 12:40:36,645:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T0 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling", "library": "will-greenleaf:K562_CRISPRi_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:40:36,804:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T0')]", 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-11 12:40:36,804:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T0/?format=json&datastore=database 2019-11-11 12:40:37,010:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T0']'. 2019-11-11 12:40:37,011:eu_debug: IN post(). 2019-11-11 12:40:37,011:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T14_R1", "technical_replicate_number": 1 } 2019-11-11 12:40:37,165:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T14_R1')]", 'title': 'Conflict', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'status': 'error'} 2019-11-11 12:40:37,165:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14_R1/?format=json&datastore=database 2019-11-11 12:40:37,383:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T14_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T14_R1']'. 2019-11-11 12:40:37,384:eu_debug: IN post(). 2019-11-11 12:40:37,384:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T14_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling", "library": "will-greenleaf:K562_CRISPRd_tiling_T14_R1", "technical_replicate_number": 1 } 2019-11-11 12:40:37,532:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T14_R1')]", 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-11 12:40:37,532:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T14_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T14_R1/?format=json&datastore=database 2019-11-11 12:40:37,745:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T14_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T14_R1']'. 2019-11-11 12:40:37,745:eu_debug: IN post(). 2019-11-11 12:40:37,746:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T14_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling", "library": "will-greenleaf:K562_CRISPRk_tiling_T14_R1", "technical_replicate_number": 1 } 2019-11-11 12:40:37,896:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T14_R1')]", 'title': 'Conflict', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'status': 'error'} 2019-11-11 12:40:37,896:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T14_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T14_R1/?format=json&datastore=database 2019-11-11 12:40:38,114:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T14_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T14_R1']'. 2019-11-11 12:40:38,114:eu_debug: IN post(). 2019-11-11 12:40:38,115:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T14_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling", "library": "will-greenleaf:K562_CRISPRi_tiling_T14_R1", "technical_replicate_number": 1 } 2019-11-11 12:40:38,272:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T14_R1')]", 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-11 12:40:38,272:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T14_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T14_R1/?format=json&datastore=database 2019-11-11 12:40:38,479:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T14_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T14_R1']'. 2019-11-11 12:40:38,480:eu_debug: IN post(). 2019-11-11 12:40:38,480:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14_R2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T14_R2", "technical_replicate_number": 1 } 2019-11-11 12:40:38,627:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T14_R2')]", 'title': 'Conflict', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'status': 'error'} 2019-11-11 12:40:38,628:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14_R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14_R2/?format=json&datastore=database 2019-11-11 12:40:38,837:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T14_R2' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T14_R2']'. 2019-11-11 12:40:38,837:eu_debug: IN post(). 2019-11-11 12:40:38,838:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T14_R2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRd_tiling", "library": "will-greenleaf:K562_CRISPRd_tiling_T14_R2", "technical_replicate_number": 1 } 2019-11-11 12:40:38,989:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T14_R2')]", 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-11 12:40:38,989:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T14_R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T14_R2/?format=json&datastore=database 2019-11-11 12:40:39,213:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T14_R2' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T14_R2']'. 2019-11-11 12:40:39,213:eu_debug: IN post(). 2019-11-11 12:40:39,214:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T14_R2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRk_tiling", "library": "will-greenleaf:K562_CRISPRk_tiling_T14_R2", "technical_replicate_number": 1 } 2019-11-11 12:40:39,367:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T14_R2')]", 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-11 12:40:39,367:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T14_R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T14_R2/?format=json&datastore=database 2019-11-11 12:40:39,581:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T14_R2' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T14_R2']'. 2019-11-11 12:40:39,581:eu_debug: IN post(). 2019-11-11 12:40:39,581:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T14_R2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRi_tiling", "library": "will-greenleaf:K562_CRISPRi_tiling_T14_R2", "technical_replicate_number": 1 } 2019-11-11 12:40:39,732:eu_debug: {'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T14_R2')]", 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2019-11-11 12:40:39,732:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T14_R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T14_R2/?format=json&datastore=database 2019-11-11 12:40:39,936:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T14_R2' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T14_R2']'. 2019-11-11 12:42:01,267:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:42:01,268:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:42:01,543:eu_debug: submission=True: In submission mode. 2019-11-11 12:42:01,555:eu_debug: IN post(). 2019-11-11 12:42:01,556:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:42:01,707:eu_debug: Success. 2019-11-11 12:42:01,707:eu_debug: IN post(). 2019-11-11 12:42:01,708:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling", "library": "will-greenleaf:K562_CRISPRd_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:42:01,851:eu_debug: Success. 2019-11-11 12:42:01,852:eu_debug: IN post(). 2019-11-11 12:42:01,852:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling", "library": "will-greenleaf:K562_CRISPRk_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:42:02,003:eu_debug: Success. 2019-11-11 12:42:02,004:eu_debug: IN post(). 2019-11-11 12:42:02,004:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling", "library": "will-greenleaf:K562_CRISPRi_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:42:02,162:eu_debug: Success. 2019-11-11 12:42:02,163:eu_debug: IN post(). 2019-11-11 12:42:02,163:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14_R1_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R1_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T14_R1", "technical_replicate_number": 1 } 2019-11-11 12:42:02,313:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('replicate:experiment_biological_technical', '6b36ecd3-7af7-47a2-a4c5-2f882b4f3301/1/1')]", '@type': ['HTTPConflict', 'Error']} 2019-11-11 12:42:02,314:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14_R1_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14_R1_R1/?format=json&datastore=database 2019-11-11 12:42:02,455:eu_debug: NOT FOUND 2019-11-11 12:47:45,427:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:47:45,429:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:47:45,711:eu_debug: submission=True: In submission mode. 2019-11-11 12:47:45,723:eu_debug: IN post(). 2019-11-11 12:47:45,723:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:47:45,863:eu_debug: {'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('replicate:experiment_biological_technical', '6b36ecd3-7af7-47a2-a4c5-2f882b4f3301/1/1'), ('alias', 'will-greenleaf:K562_CRISPRa_tiling_T0_R1')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'code': 409} 2019-11-11 12:47:45,863:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:47:46,096:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T0_R1']'. 2019-11-11 12:47:46,096:eu_debug: IN post(). 2019-11-11 12:47:46,097:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling", "library": "will-greenleaf:K562_CRISPRd_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:47:46,248:eu_debug: {'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T0_R1'), ('replicate:experiment_biological_technical', 'f55853ab-1779-4729-90f6-012fee82c980/1/1')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'code': 409} 2019-11-11 12:47:46,248:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:47:46,480:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T0_R1']'. 2019-11-11 12:47:46,480:eu_debug: IN post(). 2019-11-11 12:47:46,481:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling", "library": "will-greenleaf:K562_CRISPRk_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:47:46,624:eu_debug: {'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T0_R1'), ('replicate:experiment_biological_technical', 'd9e0072f-c51e-4952-a765-abfd68de9b3f/1/1')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'code': 409} 2019-11-11 12:47:46,624:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:47:46,852:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T0_R1']'. 2019-11-11 12:47:46,852:eu_debug: IN post(). 2019-11-11 12:47:46,853:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling", "library": "will-greenleaf:K562_CRISPRi_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:47:46,995:eu_debug: {'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('replicate:experiment_biological_technical', '9ab7df4f-dfac-4f22-9cbf-4994127fd895/1/1'), ('alias', 'will-greenleaf:K562_CRISPRi_tiling_T0_R1')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'code': 409} 2019-11-11 12:47:46,995:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:47:47,223:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T0_R1']'. 2019-11-11 12:47:47,224:eu_debug: IN post(). 2019-11-11 12:47:47,225:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T14_R1", "technical_replicate_number": 1 } 2019-11-11 12:47:47,363:eu_debug: {'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('replicate:experiment_biological_technical', '6b36ecd3-7af7-47a2-a4c5-2f882b4f3301/1/1')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'code': 409} 2019-11-11 12:47:47,363:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1/?format=json&datastore=database 2019-11-11 12:47:47,497:eu_debug: NOT FOUND 2019-11-11 12:48:37,636:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:48:37,638:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:48:37,897:eu_debug: submission=True: In submission mode. 2019-11-11 12:48:37,907:eu_debug: IN post(). 2019-11-11 12:48:37,907:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:48:38,047:eu_debug: {'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('replicate:experiment_biological_technical', '6b36ecd3-7af7-47a2-a4c5-2f882b4f3301/1/1'), ('alias', 'will-greenleaf:K562_CRISPRa_tiling_T0_R1')]", 'description': 'There was a conflict when trying to complete your request.'} 2019-11-11 12:48:38,048:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:48:38,275:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T0_R1']'. 2019-11-11 12:48:38,275:eu_debug: IN post(). 2019-11-11 12:48:38,275:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling", "library": "will-greenleaf:K562_CRISPRd_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:48:38,422:eu_debug: {'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T0_R1'), ('replicate:experiment_biological_technical', 'f55853ab-1779-4729-90f6-012fee82c980/1/1')]", 'description': 'There was a conflict when trying to complete your request.'} 2019-11-11 12:48:38,422:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:48:38,645:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T0_R1']'. 2019-11-11 12:48:38,645:eu_debug: IN post(). 2019-11-11 12:48:38,646:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling", "library": "will-greenleaf:K562_CRISPRk_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:48:38,793:eu_debug: {'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T0_R1'), ('replicate:experiment_biological_technical', 'd9e0072f-c51e-4952-a765-abfd68de9b3f/1/1')]", 'description': 'There was a conflict when trying to complete your request.'} 2019-11-11 12:48:38,793:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:48:39,009:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T0_R1']'. 2019-11-11 12:48:39,009:eu_debug: IN post(). 2019-11-11 12:48:39,010:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling", "library": "will-greenleaf:K562_CRISPRi_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:48:39,155:eu_debug: {'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('replicate:experiment_biological_technical', '9ab7df4f-dfac-4f22-9cbf-4994127fd895/1/1'), ('alias', 'will-greenleaf:K562_CRISPRi_tiling_T0_R1')]", 'description': 'There was a conflict when trying to complete your request.'} 2019-11-11 12:48:39,155:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:48:39,374:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T0_R1']'. 2019-11-11 12:48:39,375:eu_debug: IN post(). 2019-11-11 12:48:39,375:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T14_R1", "technical_replicate_number": 1 } 2019-11-11 12:48:39,522:eu_debug: {'status': 'error', '@type': ['HTTPConflict', 'Error'], 'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('replicate:experiment_biological_technical', '6b36ecd3-7af7-47a2-a4c5-2f882b4f3301/1/1')]", 'description': 'There was a conflict when trying to complete your request.'} 2019-11-11 12:48:39,522:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1/?format=json&datastore=database 2019-11-11 12:48:39,656:eu_debug: NOT FOUND 2019-11-11 12:50:45,181:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:50:45,182:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:50:45,486:eu_debug: submission=True: In submission mode. 2019-11-11 12:50:45,498:eu_debug: IN post(). 2019-11-11 12:50:45,498:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T0", "technical_replicate_number": 0 } 2019-11-11 12:50:45,639:eu_debug: Failed to POST will-greenleaf:K562_CRISPRa_tiling_T0_R1 2019-11-11 12:50:45,639:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-11 12:50:45,640:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "0.0 is less than the minimum of 1", "location": "body", "name": [ "technical_replicate_number" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 12:50:59,283:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:50:59,284:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:50:59,559:eu_debug: submission=True: In submission mode. 2019-11-11 12:50:59,571:eu_debug: IN post(). 2019-11-11 12:50:59,572:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:50:59,726:eu_debug: {'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('replicate:experiment_biological_technical', '6b36ecd3-7af7-47a2-a4c5-2f882b4f3301/1/1'), ('alias', 'will-greenleaf:K562_CRISPRa_tiling_T0_R1')]", 'code': 409, 'status': 'error', 'title': 'Conflict'} 2019-11-11 12:50:59,726:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:50:59,963:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T0_R1']'. 2019-11-11 12:50:59,964:eu_debug: IN post(). 2019-11-11 12:50:59,964:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling", "library": "will-greenleaf:K562_CRISPRd_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:51:00,117:eu_debug: {'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T0_R1'), ('replicate:experiment_biological_technical', 'f55853ab-1779-4729-90f6-012fee82c980/1/1')]", 'code': 409, 'status': 'error', 'title': 'Conflict'} 2019-11-11 12:51:00,118:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:51:00,354:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T0_R1']'. 2019-11-11 12:51:00,354:eu_debug: IN post(). 2019-11-11 12:51:00,355:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling", "library": "will-greenleaf:K562_CRISPRk_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:51:00,501:eu_debug: {'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T0_R1'), ('replicate:experiment_biological_technical', 'd9e0072f-c51e-4952-a765-abfd68de9b3f/1/1')]", 'code': 409, 'status': 'error', 'title': 'Conflict'} 2019-11-11 12:51:00,501:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:51:00,735:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T0_R1']'. 2019-11-11 12:51:00,736:eu_debug: IN post(). 2019-11-11 12:51:00,736:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T0_R1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0_R1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling", "library": "will-greenleaf:K562_CRISPRi_tiling_T0", "technical_replicate_number": 1 } 2019-11-11 12:51:00,881:eu_debug: {'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('replicate:experiment_biological_technical', '9ab7df4f-dfac-4f22-9cbf-4994127fd895/1/1'), ('alias', 'will-greenleaf:K562_CRISPRi_tiling_T0_R1')]", 'code': 409, 'status': 'error', 'title': 'Conflict'} 2019-11-11 12:51:00,882:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T0_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T0_R1/?format=json&datastore=database 2019-11-11 12:51:01,105:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T0_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T0_R1']'. 2019-11-11 12:51:01,106:eu_debug: IN post(). 2019-11-11 12:51:01,106:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T14_R1", "technical_replicate_number": 14 } 2019-11-11 12:51:01,255:eu_debug: Success. 2019-11-11 12:51:01,255:eu_debug: IN post(). 2019-11-11 12:51:01,256:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T14_R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling", "library": "will-greenleaf:K562_CRISPRd_tiling_T14_R1", "technical_replicate_number": 14 } 2019-11-11 12:51:01,412:eu_debug: Success. 2019-11-11 12:51:01,412:eu_debug: IN post(). 2019-11-11 12:51:01,413:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T14_R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling", "library": "will-greenleaf:K562_CRISPRk_tiling_T14_R1", "technical_replicate_number": 14 } 2019-11-11 12:51:01,571:eu_debug: Success. 2019-11-11 12:51:01,571:eu_debug: IN post(). 2019-11-11 12:51:01,572:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T14_R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling", "library": "will-greenleaf:K562_CRISPRi_tiling_T14_R1", "technical_replicate_number": 14 } 2019-11-11 12:51:01,731:eu_debug: Success. 2019-11-11 12:51:01,731:eu_debug: IN post(). 2019-11-11 12:51:01,732:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14_R2_T2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R2_T2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRa_tiling", "library": "will-greenleaf:K562_CRISPRa_tiling_T14_R2", "technical_replicate_number": 14 } 2019-11-11 12:51:01,880:eu_debug: Success. 2019-11-11 12:51:01,880:eu_debug: IN post(). 2019-11-11 12:51:01,880:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T14_R2_T2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R2_T2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRd_tiling", "library": "will-greenleaf:K562_CRISPRd_tiling_T14_R2", "technical_replicate_number": 14 } 2019-11-11 12:51:02,034:eu_debug: Success. 2019-11-11 12:51:02,035:eu_debug: IN post(). 2019-11-11 12:51:02,035:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T14_R2_T2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R2_T2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRk_tiling", "library": "will-greenleaf:K562_CRISPRk_tiling_T14_R2", "technical_replicate_number": 14 } 2019-11-11 12:51:02,191:eu_debug: Success. 2019-11-11 12:51:02,191:eu_debug: IN post(). 2019-11-11 12:51:02,192:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T14_R2_T2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R2_T2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRi_tiling", "library": "will-greenleaf:K562_CRISPRi_tiling_T14_R2", "technical_replicate_number": 14 } 2019-11-11 12:51:02,346:eu_debug: Success. 2019-11-11 12:59:37,511:eu_debug: Connecting to test.encodedcc.org 2019-11-11 12:59:37,512:eu_debug: submission=False: In non-submission mode. 2019-11-11 12:59:37,786:eu_debug: submission=True: In submission mode. 2019-11-11 12:59:37,798:eu_debug: IN post(). 2019-11-11 12:59:41,481:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:control for the expression screens", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:NextSeq", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single end", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 12:59:41,651:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-11 12:59:41,651:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-11 12:59:41,651:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'encode:NextSeq' not found", "location": "body", "name": [ "platform" ] }, { "description": "'single end' is not one of ['single-ended', 'paired-ended']", "location": "body", "name": [ "run_type" ] }, { "description": "'will-greenleaf:control for the expression screens' not found", "location": "body", "name": [ "dataset" ] }, { "description": "{'award': '/awards/UM1HG009436/', 'aliases': ['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz'], 'read_length': 21, 'file_size': 176635884, 'output_type': 'reads', 'submitted_file_name': 'CRISPR-screen.tiling.CRISPRa_T0.fastq.gz', 'platform': 'encode:NextSeq', 'md5sum': 'c0d5d0b1aabfbff87a2dc2ef591f0843', 'replicate': 'will-greenleaf:K562_CRISPRa_tiling_T0_R1', 'lab': '/labs/will-greenleaf/', 'dataset': 'will-greenleaf:control for the expression screens', 'run_type': 'single end', 'file_format': 'fastq'} is not valid under any of the given schemas", "location": "body", "name": [] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 13:00:30,591:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:00:30,593:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:00:30,866:eu_debug: submission=True: In submission mode. 2019-11-11 13:00:30,878:eu_debug: IN post(). 2019-11-11 13:00:31,318:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:control for the expression screens", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:NextSeq500", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single end", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:00:31,476:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-11 13:00:31,476:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-11 13:00:31,476:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'single end' is not one of ['single-ended', 'paired-ended']", "location": "body", "name": [ "run_type" ] }, { "description": "'will-greenleaf:control for the expression screens' not found", "location": "body", "name": [ "dataset" ] }, { "description": "{'read_length': 21, 'lab': '/labs/will-greenleaf/', 'file_format': 'fastq', 'file_size': 176635884, 'dataset': 'will-greenleaf:control for the expression screens', 'platform': 'encode:NextSeq500', 'run_type': 'single end', 'submitted_file_name': 'CRISPR-screen.tiling.CRISPRa_T0.fastq.gz', 'aliases': ['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz'], 'award': '/awards/UM1HG009436/', 'output_type': 'reads', 'md5sum': 'c0d5d0b1aabfbff87a2dc2ef591f0843', 'replicate': 'will-greenleaf:K562_CRISPRa_tiling_T0_R1'} is not valid under any of the given schemas", "location": "body", "name": [] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 13:02:19,153:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:02:19,154:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:02:19,455:eu_debug: submission=True: In submission mode. 2019-11-11 13:02:19,465:eu_debug: IN post(). 2019-11-11 13:02:19,902:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:NextSeq", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single end", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:02:20,070:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-11 13:02:20,070:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-11 13:02:20,070:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'encode:NextSeq' not found", "location": "body", "name": [ "platform" ] }, { "description": "'single end' is not one of ['single-ended', 'paired-ended']", "location": "body", "name": [ "run_type" ] }, { "description": "{'award': '/awards/UM1HG009436/', 'read_length': 21, 'file_size': 176635884, 'output_type': 'reads', 'submitted_file_name': 'CRISPR-screen.tiling.CRISPRa_T0.fastq.gz', 'platform': 'encode:NextSeq', 'md5sum': 'c0d5d0b1aabfbff87a2dc2ef591f0843', 'replicate': 'will-greenleaf:K562_CRISPRa_tiling_T0_R1', 'lab': '/labs/will-greenleaf/', 'file_format': 'fastq', 'dataset': 'will-greenleaf:K562_CRISPRa_tiling', 'run_type': 'single end', 'aliases': ['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']} is not valid under any of the given schemas", "location": "body", "name": [] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 13:02:43,721:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:02:43,722:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:02:44,000:eu_debug: submission=True: In submission mode. 2019-11-11 13:02:44,011:eu_debug: IN post(). 2019-11-11 13:02:44,339:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:NextSeq", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:02:44,508:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-11 13:02:44,508:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-11 13:02:44,509:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'encode:NextSeq' not found", "location": "body", "name": [ "platform" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 13:03:42,234:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:03:42,236:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:03:42,511:eu_debug: submission=True: In submission mode. 2019-11-11 13:03:42,520:eu_debug: IN post(). 2019-11-11 13:03:42,955:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:NovaSeq", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:03:43,126:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-11 13:03:43,127:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-11 13:03:43,127:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'encode:NovaSeq' not found", "location": "body", "name": [ "platform" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 13:04:27,778:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:04:27,779:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:04:28,063:eu_debug: submission=True: In submission mode. 2019-11-11 13:04:28,075:eu_debug: IN post(). 2019-11-11 13:04:28,433:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:NovaSeq", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:04:28,587:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-11 13:04:28,587:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-11 13:04:28,587:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'encode:NovaSeq' not found", "location": "body", "name": [ "platform" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 13:04:54,142:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:04:54,143:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:04:54,413:eu_debug: submission=True: In submission mode. 2019-11-11 13:04:54,425:eu_debug: IN post(). 2019-11-11 13:04:54,860:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:04:55,006:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-11 13:04:55,006:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-11 13:04:55,006:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'platform' is a required property", "location": "body", "name": [] }, { "description": "OrderedDict([('properties', OrderedDict([('platform', OrderedDict([('linkTo', 'Platform'), ('linkEnum', ['ced61406-dcc6-43c4-bddd-4c977cc676e8', 'c7564b38-ab4f-4c42-a401-3de48689a998'])]))]))]) is not allowed for {'aliases': ['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz'], 'submitted_file_name': 'CRISPR-screen.tiling.CRISPRa_T0.fastq.gz', 'output_type': 'reads', 'read_length': 21, 'md5sum': 'c0d5d0b1aabfbff87a2dc2ef591f0843', 'award': '/awards/UM1HG009436/', 'file_size': 176635884, 'run_type': 'single-ended', 'dataset': 'will-greenleaf:K562_CRISPRa_tiling', 'lab': '/labs/will-greenleaf/', 'file_format': 'fastq', 'replicate': 'will-greenleaf:K562_CRISPRa_tiling_T0_R1'}", "location": "body", "name": [] }, { "description": "{'aliases': ['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz'], 'submitted_file_name': 'CRISPR-screen.tiling.CRISPRa_T0.fastq.gz', 'output_type': 'reads', 'read_length': 21, 'md5sum': 'c0d5d0b1aabfbff87a2dc2ef591f0843', 'award': '/awards/UM1HG009436/', 'file_size': 176635884, 'run_type': 'single-ended', 'dataset': 'will-greenleaf:K562_CRISPRa_tiling', 'lab': '/labs/will-greenleaf/', 'file_format': 'fastq', 'replicate': 'will-greenleaf:K562_CRISPRa_tiling_T0_R1'} is not valid under any of the given schemas", "location": "body", "name": [] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 13:06:02,102:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:06:02,104:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:06:02,364:eu_debug: submission=True: In submission mode. 2019-11-11 13:06:02,375:eu_debug: IN post(). 2019-11-11 13:06:02,677:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:NovaSeq", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:06:02,833:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-11 13:06:02,833:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-11 13:06:02,833:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'encode:NovaSeq' not found", "location": "body", "name": [ "platform" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-11 13:07:19,802:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:07:19,804:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:07:20,119:eu_debug: submission=True: In submission mode. 2019-11-11 13:07:20,131:eu_debug: IN post(). 2019-11-11 13:07:20,566:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:07:21,102:eu_debug: Success. 2019-11-11 13:07:21,103:eu_debug: IN upload_file() 2019-11-11 13:07:21,103:eu_debug: Attempting to generate new file upload credentials 2019-11-11 13:07:21,580:eu_debug: Success: upload credentials for 'TSTFF919016' regenerated. 2019-11-11 13:07:21,580:eu_debug: >>>>>>GET TSTFF919016 From DCC with URL https://test.encodedcc.org/TSTFF919016/?format=json&datastore=database 2019-11-11 13:07:21,899:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T0.fastq.gz s3://encoded-files-dev/2019/11/11/ef091499-1fbd-4788-8eca-91533d321e3d/TSTFF919016.fastq.gz'. 2019-11-11 13:07:22,376:eu_debug: Failed to upload file 'CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' for TSTFF919016. 2019-11-11 13:07:22,376:eu_debug: Subprocess command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T0.fastq.gz s3://encoded-files-dev/2019/11/11/ef091499-1fbd-4788-8eca-91533d321e3d/TSTFF919016.fastq.gz' failed with return code '127'. Stdout is ''. Stderr is '/bin/sh: 1: aws: not found '. 2019-11-11 13:10:09,884:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:10:09,885:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:10:10,168:eu_debug: submission=True: In submission mode. 2019-11-11 13:10:10,176:eu_debug: IN post(). 2019-11-11 13:10:10,497:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:10:11,029:eu_debug: {'title': 'Conflict', 'code': 409, 'status': 'error', 'detail': "Keys conflict: [('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz')]", '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.'} 2019-11-11 13:10:11,029:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2019-11-11 13:10:11,340:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2019-11-11 13:10:11,341:eu_debug: IN post(). 2019-11-11 13:10:14,196:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2019-11-11 13:10:14,719:eu_debug: Success. 2019-11-11 13:10:14,720:eu_debug: IN upload_file() 2019-11-11 13:10:14,720:eu_debug: Attempting to generate new file upload credentials 2019-11-11 13:10:15,210:eu_debug: Success: upload credentials for 'TSTFF420546' regenerated. 2019-11-11 13:10:15,211:eu_debug: >>>>>>GET TSTFF420546 From DCC with URL https://test.encodedcc.org/TSTFF420546/?format=json&datastore=database 2019-11-11 13:10:15,538:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz s3://encoded-files-dev/2019/11/11/a3695c35-90be-4fe4-ae58-eb145f0e3e6d/TSTFF420546.fastq.gz'. 2019-11-11 13:10:15,892:eu_debug: Failed to upload file 'CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' for TSTFF420546. 2019-11-11 13:10:15,893:eu_debug: Subprocess command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz s3://encoded-files-dev/2019/11/11/a3695c35-90be-4fe4-ae58-eb145f0e3e6d/TSTFF420546.fastq.gz' failed with return code '127'. Stdout is ''. Stderr is '/bin/sh: 1: aws: not found '. 2019-11-11 13:12:44,602:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:12:44,603:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:12:44,900:eu_debug: submission=True: In submission mode. 2019-11-11 13:12:44,910:eu_debug: IN post(). 2019-11-11 13:12:45,346:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:12:45,880:eu_debug: {'title': 'Conflict', 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'detail': "Keys conflict: [('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz')]", '@type': ['HTTPConflict', 'Error'], 'code': 409} 2019-11-11 13:12:45,881:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2019-11-11 13:12:46,213:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2019-11-11 13:12:46,214:eu_debug: IN post(). 2019-11-11 13:12:46,617:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2019-11-11 13:12:47,145:eu_debug: {'title': 'Conflict', '@type': ['HTTPConflict', 'Error'], 'status': 'error', 'detail': "Keys conflict: [('alias', 'md5:122fdcdbcdfeb6c6606368f434b5ad0d'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz')]", 'description': 'There was a conflict when trying to complete your request.', 'code': 409} 2019-11-11 13:12:47,145:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz/?format=json&datastore=database 2019-11-11 13:12:47,468:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz']'. 2019-11-11 13:12:47,468:eu_debug: IN post(). 2019-11-11 13:12:51,025:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 185739290, "lab": "/labs/will-greenleaf/", "md5sum": "a614d15de47f2b7eb05aea9281c0d2ae", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14_R2_T2", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" } 2019-11-11 13:12:51,575:eu_debug: Success. 2019-11-11 13:12:51,576:eu_debug: IN upload_file() 2019-11-11 13:12:51,576:eu_debug: Attempting to generate new file upload credentials 2019-11-11 13:12:52,087:eu_debug: Success: upload credentials for 'TSTFF990047' regenerated. 2019-11-11 13:12:52,087:eu_debug: >>>>>>GET TSTFF990047 From DCC with URL https://test.encodedcc.org/TSTFF990047/?format=json&datastore=database 2019-11-11 13:12:52,424:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz s3://encoded-files-dev/2019/11/11/522421d6-557c-4e56-9161-63a8cd704c3b/TSTFF990047.fastq.gz'. 2019-11-11 13:12:52,840:eu_debug: Failed to upload file 'CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz' for TSTFF990047. 2019-11-11 13:12:52,841:eu_debug: Subprocess command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz s3://encoded-files-dev/2019/11/11/522421d6-557c-4e56-9161-63a8cd704c3b/TSTFF990047.fastq.gz' failed with return code '127'. Stdout is ''. Stderr is '/bin/sh: 1: aws: not found '. 2019-11-11 13:13:11,581:eu_debug: Connecting to test.encodedcc.org 2019-11-11 13:13:11,583:eu_debug: submission=False: In non-submission mode. 2019-11-11 13:13:11,919:eu_debug: submission=True: In submission mode. 2019-11-11 13:13:11,929:eu_debug: IN post(). 2019-11-11 13:13:12,365:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-11 13:13:12,866:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz')]", 'code': 409, 'status': 'error', 'description': 'There was a conflict when trying to complete your request.'} 2019-11-11 13:13:12,866:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2019-11-11 13:13:13,200:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2019-11-11 13:13:13,201:eu_debug: IN post(). 2019-11-11 13:13:13,595:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2019-11-11 13:13:14,112:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'md5:122fdcdbcdfeb6c6606368f434b5ad0d'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz')]", 'code': 409, 'status': 'error', 'description': 'There was a conflict when trying to complete your request.'} 2019-11-11 13:13:14,112:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz/?format=json&datastore=database 2019-11-11 13:13:14,449:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz']'. 2019-11-11 13:13:14,449:eu_debug: IN post(). 2019-11-11 13:13:14,905:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 185739290, "lab": "/labs/will-greenleaf/", "md5sum": "a614d15de47f2b7eb05aea9281c0d2ae", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14_R2_T2", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" } 2019-11-11 13:13:15,842:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz'), ('alias', 'md5:a614d15de47f2b7eb05aea9281c0d2ae')]", 'code': 409, 'status': 'error', 'description': 'There was a conflict when trying to complete your request.'} 2019-11-11 13:13:15,843:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz/?format=json&datastore=database 2019-11-11 13:13:16,173:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz']'. 2019-11-11 13:13:16,174:eu_debug: IN post(). 2019-11-11 13:13:20,142:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRi_tiling", "file_format": "fastq", "file_size": 191195503, "lab": "/labs/will-greenleaf/", "md5sum": "eabc7054ea1d767c90811bc46557d6bf", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRi_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRi_T0.fastq.gz" } 2019-11-11 13:13:20,653:eu_debug: Success. 2019-11-11 13:13:20,654:eu_debug: IN upload_file() 2019-11-11 13:13:20,655:eu_debug: Attempting to generate new file upload credentials 2019-11-11 13:13:21,158:eu_debug: Success: upload credentials for 'TSTFF000765' regenerated. 2019-11-11 13:13:21,158:eu_debug: >>>>>>GET TSTFF000765 From DCC with URL https://test.encodedcc.org/TSTFF000765/?format=json&datastore=database 2019-11-11 13:13:21,476:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRi_T0.fastq.gz s3://encoded-files-dev/2019/11/11/1d542401-ca7e-49f3-8a08-76ee61cbf685/TSTFF000765.fastq.gz'. 2019-11-11 13:13:21,712:eu_debug: Failed to upload file 'CRISPR-screen.tiling.CRISPRi_T0.fastq.gz' for TSTFF000765. 2019-11-11 13:13:21,712:eu_debug: Subprocess command 'aws s3 cp CRISPR-screen.tiling.CRISPRi_T0.fastq.gz s3://encoded-files-dev/2019/11/11/1d542401-ca7e-49f3-8a08-76ee61cbf685/TSTFF000765.fastq.gz' failed with return code '127'. Stdout is ''. Stderr is '/bin/sh: 1: aws: not found '. 2019-11-25 12:39:11,263:eu_debug: Connecting to test.encodedcc.org 2019-11-25 12:39:11,298:eu_debug: submission=False: In non-submission mode. 2019-11-25 12:39:11,298:eu_debug: WARNING: API keys () not set, all functions have no permission 2019-11-25 12:39:11,620:eu_debug: submission=True: In submission mode. 2019-11-25 12:39:11,685:eu_debug: IN post(). 2019-11-25 12:39:14,846:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-25 12:39:14,969:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-25 12:39:14,970:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-25 12:39:14,970:eu_debug: { "@type": [ "CSRFTokenError", "Error" ], "code": 400, "description": "The server could not comply with the request since it is either malformed or otherwise incorrect.", "detail": "Missing CSRF token", "status": "error", "title": "Bad Request" } 2019-11-25 12:39:54,508:eu_debug: Connecting to test.encodedcc.org 2019-11-25 12:39:54,510:eu_debug: submission=False: In non-submission mode. 2019-11-25 12:39:54,808:eu_debug: submission=True: In submission mode. 2019-11-25 12:39:54,819:eu_debug: IN post(). 2019-11-25 12:39:55,324:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-25 12:39:55,825:eu_debug: {'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz')]", 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.'} 2019-11-25 12:39:55,825:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2019-11-25 12:39:56,160:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2019-11-25 12:39:56,160:eu_debug: IN post(). 2019-11-25 12:39:59,419:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14_R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2019-11-25 12:40:00,166:eu_debug: {'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz'), ('alias', 'md5:122fdcdbcdfeb6c6606368f434b5ad0d')]", 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.'} 2019-11-25 12:40:00,166:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz/?format=json&datastore=database 2019-11-25 12:40:00,490:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz']'. 2019-11-25 12:40:00,491:eu_debug: IN post(). 2019-11-25 12:40:04,453:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling", "file_format": "fastq", "file_size": 185739290, "lab": "/labs/will-greenleaf/", "md5sum": "a614d15de47f2b7eb05aea9281c0d2ae", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14_R2_T2", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" } 2019-11-25 12:40:04,959:eu_debug: {'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'md5:a614d15de47f2b7eb05aea9281c0d2ae'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz')]", 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.'} 2019-11-25 12:40:04,960:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz/?format=json&datastore=database 2019-11-25 12:40:05,283:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz']'. 2019-11-25 12:40:05,283:eu_debug: IN post(). 2019-11-25 12:40:09,293:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRi_tiling", "file_format": "fastq", "file_size": 191195503, "lab": "/labs/will-greenleaf/", "md5sum": "eabc7054ea1d767c90811bc46557d6bf", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRi_tiling_T0_R1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRi_T0.fastq.gz" } 2019-11-25 12:40:09,809:eu_debug: {'code': 409, 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz'), ('alias', 'md5:eabc7054ea1d767c90811bc46557d6bf')]", 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.'} 2019-11-25 12:40:09,809:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz/?format=json&datastore=database 2019-11-25 12:40:10,106:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz']'. 2019-11-25 12:40:10,107:eu_debug: IN post(). 2019-11-25 12:40:13,554:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRi_tiling", "file_format": "fastq", "file_size": 152245698, "lab": "/labs/will-greenleaf/", "md5sum": "e5ef64d531094a4c95b877b5c5bbbad6", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRi_tiling_T14_R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz" } 2019-11-25 12:40:14,075:eu_debug: Success. 2019-11-25 12:40:14,077:eu_debug: IN upload_file() 2019-11-25 12:40:14,077:eu_debug: Attempting to generate new file upload credentials 2019-11-25 12:40:14,562:eu_debug: Success: upload credentials for 'TSTFF933769' regenerated. 2019-11-25 12:40:14,562:eu_debug: >>>>>>GET TSTFF933769 From DCC with URL https://test.encodedcc.org/TSTFF933769/?format=json&datastore=database 2019-11-25 12:40:14,875:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz s3://encoded-files-dev/2019/11/25/7ac357b4-634a-4b25-868a-dac27047b710/TSTFF933769.fastq.gz'. 2019-11-25 12:40:15,202:eu_debug: Failed to upload file 'CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz' for TSTFF933769. 2019-11-25 12:40:15,203:eu_debug: Subprocess command 'aws s3 cp CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz s3://encoded-files-dev/2019/11/25/7ac357b4-634a-4b25-868a-dac27047b710/TSTFF933769.fastq.gz' failed with return code '127'. Stdout is ''. Stderr is '/bin/sh: 1: aws: not found '. 2019-11-26 00:23:44,423:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:23:44,448:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:23:44,865:eu_debug: submission=True: In submission mode. 2019-11-26 00:23:44,916:eu_debug: IN post(). 2019-11-26 00:23:44,917:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T0 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T0" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:45,100:eu_debug: Success. 2019-11-26 00:23:45,100:eu_debug: IN post(). 2019-11-26 00:23:45,101:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T0 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T0" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:45,279:eu_debug: Success. 2019-11-26 00:23:45,279:eu_debug: IN post(). 2019-11-26 00:23:45,280:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T0 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T0" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:45,460:eu_debug: Success. 2019-11-26 00:23:45,461:eu_debug: IN post(). 2019-11-26 00:23:45,461:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T0 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T0" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:45,641:eu_debug: Success. 2019-11-26 00:23:45,641:eu_debug: IN post(). 2019-11-26 00:23:45,642:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:45,833:eu_debug: Success. 2019-11-26 00:23:45,834:eu_debug: IN post(). 2019-11-26 00:23:45,834:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:46,011:eu_debug: Success. 2019-11-26 00:23:46,012:eu_debug: IN post(). 2019-11-26 00:23:46,012:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:46,195:eu_debug: Success. 2019-11-26 00:23:46,195:eu_debug: IN post(). 2019-11-26 00:23:46,196:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:46,372:eu_debug: Success. 2019-11-26 00:23:46,373:eu_debug: IN post(). 2019-11-26 00:23:46,373:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:46,549:eu_debug: Success. 2019-11-26 00:23:46,549:eu_debug: IN post(). 2019-11-26 00:23:46,550:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:46,726:eu_debug: Success. 2019-11-26 00:23:46,727:eu_debug: IN post(). 2019-11-26 00:23:46,727:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:46,905:eu_debug: Success. 2019-11-26 00:23:46,905:eu_debug: IN post(). 2019-11-26 00:23:46,906:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:23:47,089:eu_debug: Success. 2019-11-26 00:23:51,966:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:23:51,969:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:23:52,254:eu_debug: submission=True: In submission mode. 2019-11-26 00:23:52,267:eu_debug: IN post(). 2019-11-26 00:23:52,268:eu_debug: <<<<<< POST reference record will-greenleaf:K562_CRISPR_tiling_reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-26 00:23:52,431:eu_debug: Success. 2019-11-26 00:24:02,233:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:24:02,239:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:24:02,529:eu_debug: submission=True: In submission mode. 2019-11-26 00:24:02,541:eu_debug: IN post(). 2019-11-26 00:24:02,542:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14_R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:02,696:eu_debug: Success. 2019-11-26 00:24:02,696:eu_debug: IN post(). 2019-11-26 00:24:02,697:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14_R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:02,864:eu_debug: Success. 2019-11-26 00:24:02,864:eu_debug: IN post(). 2019-11-26 00:24:02,865:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14_R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:03,025:eu_debug: Success. 2019-11-26 00:24:03,025:eu_debug: IN post(). 2019-11-26 00:24:03,026:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14_R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:03,190:eu_debug: Success. 2019-11-26 00:24:03,190:eu_debug: IN post(). 2019-11-26 00:24:03,191:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14_R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:03,367:eu_debug: Success. 2019-11-26 00:24:03,368:eu_debug: IN post(). 2019-11-26 00:24:03,368:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14_R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:03,542:eu_debug: Success. 2019-11-26 00:24:03,542:eu_debug: IN post(). 2019-11-26 00:24:03,543:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14_R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:03,715:eu_debug: Success. 2019-11-26 00:24:03,715:eu_debug: IN post(). 2019-11-26 00:24:03,716:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14_R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:03,881:eu_debug: Success. 2019-11-26 00:24:03,882:eu_debug: IN post(). 2019-11-26 00:24:03,882:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T0_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T0", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:04,052:eu_debug: Success. 2019-11-26 00:24:04,052:eu_debug: IN post(). 2019-11-26 00:24:04,053:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T0_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T0", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:04,218:eu_debug: Success. 2019-11-26 00:24:04,218:eu_debug: IN post(). 2019-11-26 00:24:04,219:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T0_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T0", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:04,384:eu_debug: Success. 2019-11-26 00:24:04,384:eu_debug: IN post(). 2019-11-26 00:24:04,385:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T0_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T0", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:24:04,557:eu_debug: Success. 2019-11-26 00:24:09,251:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:24:09,256:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:24:09,546:eu_debug: submission=True: In submission mode. 2019-11-26 00:24:09,562:eu_debug: IN post(). 2019-11-26 00:24:09,563:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:09,724:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T0')]", 'status': 'error', 'description': 'There was a conflict when trying to complete your request.', 'code': 409, 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:24:09,725:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T0/?format=json&datastore=database 2019-11-26 00:24:09,950:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T0']'. 2019-11-26 00:24:09,950:eu_debug: IN post(). 2019-11-26 00:24:09,951:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:10,109:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T0')]", 'status': 'error', 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'code': 409, '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:24:10,109:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T0/?format=json&datastore=database 2019-11-26 00:24:10,337:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T0']'. 2019-11-26 00:24:10,338:eu_debug: IN post(). 2019-11-26 00:24:10,338:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:10,488:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T0')]", 'status': 'error', 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'code': 409, '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:24:10,489:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T0/?format=json&datastore=database 2019-11-26 00:24:10,712:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T0']'. 2019-11-26 00:24:10,713:eu_debug: IN post(). 2019-11-26 00:24:10,713:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:10,877:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T0')]", 'status': 'error', 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'code': 409, '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:24:10,877:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T0/?format=json&datastore=database 2019-11-26 00:24:11,098:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T0']'. 2019-11-26 00:24:11,098:eu_debug: IN post(). 2019-11-26 00:24:11,099:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:11,260:eu_debug: Success. 2019-11-26 00:24:11,260:eu_debug: IN post(). 2019-11-26 00:24:11,261:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:11,427:eu_debug: Success. 2019-11-26 00:24:11,428:eu_debug: IN post(). 2019-11-26 00:24:11,428:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:11,596:eu_debug: Success. 2019-11-26 00:24:11,596:eu_debug: IN post(). 2019-11-26 00:24:11,597:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:11,761:eu_debug: Success. 2019-11-26 00:24:23,082:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:24:23,089:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:24:23,445:eu_debug: submission=True: In submission mode. 2019-11-26 00:24:23,458:eu_debug: IN post(). 2019-11-26 00:24:23,459:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:23,633:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T0')]", 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-26 00:24:23,634:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T0/?format=json&datastore=database 2019-11-26 00:24:23,866:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T0']'. 2019-11-26 00:24:23,866:eu_debug: IN post(). 2019-11-26 00:24:23,867:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:24,037:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T0')]", 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-26 00:24:24,038:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T0/?format=json&datastore=database 2019-11-26 00:24:24,276:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T0']'. 2019-11-26 00:24:24,277:eu_debug: IN post(). 2019-11-26 00:24:24,277:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:24,440:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T0')]", 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-26 00:24:24,441:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T0/?format=json&datastore=database 2019-11-26 00:24:24,677:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T0']'. 2019-11-26 00:24:24,678:eu_debug: IN post(). 2019-11-26 00:24:24,678:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:24,848:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T0')]", 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-26 00:24:24,849:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T0/?format=json&datastore=database 2019-11-26 00:24:25,080:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T0']'. 2019-11-26 00:24:25,080:eu_debug: IN post(). 2019-11-26 00:24:25,081:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:25,246:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T14')]", 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-26 00:24:25,247:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14/?format=json&datastore=database 2019-11-26 00:24:25,488:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T14']'. 2019-11-26 00:24:25,488:eu_debug: IN post(). 2019-11-26 00:24:25,489:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:25,650:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T14')]", 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-26 00:24:25,650:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T14/?format=json&datastore=database 2019-11-26 00:24:25,879:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T14']'. 2019-11-26 00:24:25,879:eu_debug: IN post(). 2019-11-26 00:24:25,880:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:26,045:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T14')]", 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-26 00:24:26,045:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T14/?format=json&datastore=database 2019-11-26 00:24:26,277:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T14']'. 2019-11-26 00:24:26,277:eu_debug: IN post(). 2019-11-26 00:24:26,278:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:24:26,456:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T14')]", 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict'} 2019-11-26 00:24:26,456:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T14/?format=json&datastore=database 2019-11-26 00:24:26,679:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T14']'. 2019-11-26 00:25:46,479:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:25:46,484:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:25:46,766:eu_debug: submission=True: In submission mode. 2019-11-26 00:25:46,784:eu_debug: IN post(). 2019-11-26 00:25:46,785:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T0_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T0_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:46,954:eu_debug: Success. 2019-11-26 00:25:46,954:eu_debug: IN post(). 2019-11-26 00:25:46,955:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T0_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T0_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:47,127:eu_debug: Success. 2019-11-26 00:25:47,127:eu_debug: IN post(). 2019-11-26 00:25:47,128:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T0_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T0_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:47,295:eu_debug: Success. 2019-11-26 00:25:47,295:eu_debug: IN post(). 2019-11-26 00:25:47,296:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T0_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T0_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:47,466:eu_debug: Success. 2019-11-26 00:25:47,466:eu_debug: IN post(). 2019-11-26 00:25:47,467:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:47,628:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1')]", 'code': 409} 2019-11-26 00:25:47,629:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1/?format=json&datastore=database 2019-11-26 00:25:47,860:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1']'. 2019-11-26 00:25:47,860:eu_debug: IN post(). 2019-11-26 00:25:47,861:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:48,023:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1')]", 'code': 409} 2019-11-26 00:25:48,023:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1/?format=json&datastore=database 2019-11-26 00:25:48,263:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1']'. 2019-11-26 00:25:48,264:eu_debug: IN post(). 2019-11-26 00:25:48,264:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:48,433:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1')]", 'code': 409} 2019-11-26 00:25:48,433:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1/?format=json&datastore=database 2019-11-26 00:25:48,670:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1']'. 2019-11-26 00:25:48,670:eu_debug: IN post(). 2019-11-26 00:25:48,671:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:48,843:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1')]", 'code': 409} 2019-11-26 00:25:48,843:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1/?format=json&datastore=database 2019-11-26 00:25:49,078:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1']'. 2019-11-26 00:25:49,079:eu_debug: IN post(). 2019-11-26 00:25:49,079:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:49,249:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2')]", 'code': 409} 2019-11-26 00:25:49,249:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2/?format=json&datastore=database 2019-11-26 00:25:49,490:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2']'. 2019-11-26 00:25:49,491:eu_debug: IN post(). 2019-11-26 00:25:49,491:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:49,663:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2')]", 'code': 409} 2019-11-26 00:25:49,664:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2/?format=json&datastore=database 2019-11-26 00:25:49,907:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2']'. 2019-11-26 00:25:49,907:eu_debug: IN post(). 2019-11-26 00:25:49,908:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:50,070:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2')]", 'code': 409} 2019-11-26 00:25:50,071:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2/?format=json&datastore=database 2019-11-26 00:25:50,299:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2']'. 2019-11-26 00:25:50,299:eu_debug: IN post(). 2019-11-26 00:25:50,300:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:25:50,461:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'status': 'error', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2')]", 'code': 409} 2019-11-26 00:25:50,461:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2/?format=json&datastore=database 2019-11-26 00:25:50,701:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2']'. 2019-11-26 00:25:54,720:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:25:54,721:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:25:55,002:eu_debug: submission=True: In submission mode. 2019-11-26 00:25:55,013:eu_debug: IN post(). 2019-11-26 00:25:55,013:eu_debug: <<<<<< POST reference record will-greenleaf:K562_CRISPR_tiling_reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-26 00:25:55,166:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPR_tiling_reference')]", 'status': 'error', 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:25:55,167:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPR_tiling_reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPR_tiling_reference/?format=json&datastore=database 2019-11-26 00:25:55,386:eu_debug: Will not POST 'will-greenleaf:K562_CRISPR_tiling_reference' since it already exists with aliases '['will-greenleaf:K562_CRISPR_tiling_reference']'. 2019-11-26 00:25:58,839:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:25:58,843:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:25:59,139:eu_debug: submission=True: In submission mode. 2019-11-26 00:25:59,159:eu_debug: IN post(). 2019-11-26 00:25:59,160:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14_R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T14_R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:25:59,321:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T14_R1_library')]"} 2019-11-26 00:25:59,321:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14_R1_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14_R1_library/?format=json&datastore=database 2019-11-26 00:25:59,533:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T14_R1_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T14_R1_library']'. 2019-11-26 00:25:59,533:eu_debug: IN post(). 2019-11-26 00:25:59,534:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14_R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14_R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T14_R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:25:59,700:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T14_R2_library')]"} 2019-11-26 00:25:59,701:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14_R2_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14_R2_library/?format=json&datastore=database 2019-11-26 00:25:59,920:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T14_R2_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T14_R2_library']'. 2019-11-26 00:25:59,920:eu_debug: IN post(). 2019-11-26 00:25:59,921:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14_R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T14_R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:00,081:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T14_R1_library')]"} 2019-11-26 00:26:00,081:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T14_R1_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T14_R1_library/?format=json&datastore=database 2019-11-26 00:26:00,305:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T14_R1_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T14_R1_library']'. 2019-11-26 00:26:00,305:eu_debug: IN post(). 2019-11-26 00:26:00,306:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14_R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14_R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T14_R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:00,464:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T14_R2_library')]"} 2019-11-26 00:26:00,465:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T14_R2_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T14_R2_library/?format=json&datastore=database 2019-11-26 00:26:00,682:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T14_R2_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T14_R2_library']'. 2019-11-26 00:26:00,682:eu_debug: IN post(). 2019-11-26 00:26:00,683:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14_R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T14_R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:00,849:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T14_R1_library')]"} 2019-11-26 00:26:00,849:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T14_R1_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T14_R1_library/?format=json&datastore=database 2019-11-26 00:26:01,071:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T14_R1_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T14_R1_library']'. 2019-11-26 00:26:01,072:eu_debug: IN post(). 2019-11-26 00:26:01,072:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14_R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14_R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T14_R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:01,240:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T14_R2_library')]"} 2019-11-26 00:26:01,240:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T14_R2_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T14_R2_library/?format=json&datastore=database 2019-11-26 00:26:01,459:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T14_R2_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T14_R2_library']'. 2019-11-26 00:26:01,459:eu_debug: IN post(). 2019-11-26 00:26:01,460:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14_R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T14_R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:01,625:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T14_R1_library')]"} 2019-11-26 00:26:01,625:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T14_R1_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T14_R1_library/?format=json&datastore=database 2019-11-26 00:26:01,841:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T14_R1_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T14_R1_library']'. 2019-11-26 00:26:01,842:eu_debug: IN post(). 2019-11-26 00:26:01,842:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14_R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14_R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T14_R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:02,007:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T14_R2_library')]"} 2019-11-26 00:26:02,008:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T14_R2_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T14_R2_library/?format=json&datastore=database 2019-11-26 00:26:02,240:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T14_R2_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T14_R2_library']'. 2019-11-26 00:26:02,241:eu_debug: IN post(). 2019-11-26 00:26:02,241:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T0_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T0", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:02,408:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T0_library')]"} 2019-11-26 00:26:02,409:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T0_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T0_library/?format=json&datastore=database 2019-11-26 00:26:02,638:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T0_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T0_library']'. 2019-11-26 00:26:02,638:eu_debug: IN post(). 2019-11-26 00:26:02,639:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T0_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T0", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:02,816:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T0_library')]"} 2019-11-26 00:26:02,820:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T0_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T0_library/?format=json&datastore=database 2019-11-26 00:26:03,052:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T0_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T0_library']'. 2019-11-26 00:26:03,056:eu_debug: IN post(). 2019-11-26 00:26:03,056:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T0_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T0", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:03,221:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T0_library')]"} 2019-11-26 00:26:03,222:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T0_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T0_library/?format=json&datastore=database 2019-11-26 00:26:03,445:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T0_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T0_library']'. 2019-11-26 00:26:03,445:eu_debug: IN post(). 2019-11-26 00:26:03,446:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T0_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T0", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:26:03,617:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T0_library')]"} 2019-11-26 00:26:03,617:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T0_library From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T0_library/?format=json&datastore=database 2019-11-26 00:26:03,827:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T0_library' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T0_library']'. 2019-11-26 00:26:07,943:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:26:07,948:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:26:08,225:eu_debug: submission=True: In submission mode. 2019-11-26 00:26:08,248:eu_debug: IN post(). 2019-11-26 00:26:08,249:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:26:08,415:eu_debug: {'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T0')]"} 2019-11-26 00:26:08,416:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T0/?format=json&datastore=database 2019-11-26 00:26:08,651:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T0']'. 2019-11-26 00:26:08,652:eu_debug: IN post(). 2019-11-26 00:26:08,652:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:26:08,824:eu_debug: {'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T0')]"} 2019-11-26 00:26:08,824:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T0/?format=json&datastore=database 2019-11-26 00:26:09,048:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T0']'. 2019-11-26 00:26:09,048:eu_debug: IN post(). 2019-11-26 00:26:09,049:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:26:09,213:eu_debug: {'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T0')]"} 2019-11-26 00:26:09,214:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T0/?format=json&datastore=database 2019-11-26 00:26:09,444:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T0']'. 2019-11-26 00:26:09,444:eu_debug: IN post(). 2019-11-26 00:26:09,445:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling_T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:26:09,615:eu_debug: {'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T0')]"} 2019-11-26 00:26:09,615:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T0/?format=json&datastore=database 2019-11-26 00:26:09,850:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T0']'. 2019-11-26 00:26:09,851:eu_debug: IN post(). 2019-11-26 00:26:09,851:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:26:10,028:eu_debug: {'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T14')]"} 2019-11-26 00:26:10,028:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14/?format=json&datastore=database 2019-11-26 00:26:10,263:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T14']'. 2019-11-26 00:26:10,263:eu_debug: IN post(). 2019-11-26 00:26:10,264:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:26:10,433:eu_debug: {'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T14')]"} 2019-11-26 00:26:10,434:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T14/?format=json&datastore=database 2019-11-26 00:26:10,678:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T14']'. 2019-11-26 00:26:10,678:eu_debug: IN post(). 2019-11-26 00:26:10,679:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:26:10,846:eu_debug: {'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T14')]"} 2019-11-26 00:26:10,847:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T14/?format=json&datastore=database 2019-11-26 00:26:11,080:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T14']'. 2019-11-26 00:26:11,081:eu_debug: IN post(). 2019-11-26 00:26:11,081:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling_T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:26:11,249:eu_debug: {'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T14')]"} 2019-11-26 00:26:11,249:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T14/?format=json&datastore=database 2019-11-26 00:26:11,493:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T14']'. 2019-11-26 00:26:18,466:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:26:18,473:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:26:18,759:eu_debug: submission=True: In submission mode. 2019-11-26 00:26:18,779:eu_debug: IN post(). 2019-11-26 00:26:18,780:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0_R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0_R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling_T0", "library": "will-greenleaf:K562_CRISPRa_tiling_T0_library", "technical_replicate_number": 1 } 2019-11-26 00:26:18,932:eu_debug: Failed to POST will-greenleaf:K562_CRISPRa_tiling_T0_R1_T1 2019-11-26 00:26:18,932:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-26 00:26:18,933:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562_CRISPRa_tiling_T0' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-26 00:32:46,656:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:32:46,659:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:32:46,965:eu_debug: submission=True: In submission mode. 2019-11-26 00:32:46,982:eu_debug: IN post(). 2019-11-26 00:32:46,982:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:32:47,151:eu_debug: Success. 2019-11-26 00:32:47,151:eu_debug: IN post(). 2019-11-26 00:32:47,152:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:32:47,309:eu_debug: Success. 2019-11-26 00:32:47,310:eu_debug: IN post(). 2019-11-26 00:32:47,310:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:32:47,473:eu_debug: Success. 2019-11-26 00:32:47,473:eu_debug: IN post(). 2019-11-26 00:32:47,474:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:32:47,641:eu_debug: Success. 2019-11-26 00:32:47,642:eu_debug: IN post(). 2019-11-26 00:32:47,642:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:32:47,820:eu_debug: Success. 2019-11-26 00:32:47,821:eu_debug: IN post(). 2019-11-26 00:32:47,821:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:32:47,996:eu_debug: Success. 2019-11-26 00:32:47,997:eu_debug: IN post(). 2019-11-26 00:32:47,998:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:32:48,167:eu_debug: Success. 2019-11-26 00:32:48,167:eu_debug: IN post(). 2019-11-26 00:32:48,168:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:32:48,349:eu_debug: Success. 2019-11-26 00:32:53,704:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:32:53,710:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:32:53,998:eu_debug: submission=True: In submission mode. 2019-11-26 00:32:54,021:eu_debug: IN post(). 2019-11-26 00:32:54,022:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T0-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T0-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:54,205:eu_debug: Success. 2019-11-26 00:32:54,205:eu_debug: IN post(). 2019-11-26 00:32:54,206:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T0-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T0-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:54,384:eu_debug: Success. 2019-11-26 00:32:54,384:eu_debug: IN post(). 2019-11-26 00:32:54,385:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T0-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T0-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:54,567:eu_debug: Success. 2019-11-26 00:32:54,567:eu_debug: IN post(). 2019-11-26 00:32:54,568:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T0-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T0-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:54,745:eu_debug: Success. 2019-11-26 00:32:54,745:eu_debug: IN post(). 2019-11-26 00:32:54,746:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T14-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T14-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:54,929:eu_debug: Success. 2019-11-26 00:32:54,929:eu_debug: IN post(). 2019-11-26 00:32:54,930:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T14-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T14-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:55,116:eu_debug: Success. 2019-11-26 00:32:55,116:eu_debug: IN post(). 2019-11-26 00:32:55,117:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T14-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T14-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:55,301:eu_debug: Success. 2019-11-26 00:32:55,302:eu_debug: IN post(). 2019-11-26 00:32:55,302:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T14-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T14-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:55,484:eu_debug: Success. 2019-11-26 00:32:55,484:eu_debug: IN post(). 2019-11-26 00:32:55,484:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T14-R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T14-R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:55,682:eu_debug: Success. 2019-11-26 00:32:55,682:eu_debug: IN post(). 2019-11-26 00:32:55,683:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T14-R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T14-R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:55,868:eu_debug: Success. 2019-11-26 00:32:55,869:eu_debug: IN post(). 2019-11-26 00:32:55,869:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T14-R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T14-R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:56,047:eu_debug: Success. 2019-11-26 00:32:56,048:eu_debug: IN post(). 2019-11-26 00:32:56,048:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T14-R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T14-R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2019-11-26 00:32:56,221:eu_debug: Success. 2019-11-26 00:33:03,028:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:33:03,032:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:33:03,308:eu_debug: submission=True: In submission mode. 2019-11-26 00:33:03,319:eu_debug: IN post(). 2019-11-26 00:33:03,320:eu_debug: <<<<<< POST reference record will-greenleaf:K562_CRISPR_tiling_reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2019-11-26 00:33:03,475:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'code': 409, 'status': 'error', 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPR_tiling_reference')]", 'title': 'Conflict'} 2019-11-26 00:33:03,475:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPR_tiling_reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPR_tiling_reference/?format=json&datastore=database 2019-11-26 00:33:03,690:eu_debug: Will not POST 'will-greenleaf:K562_CRISPR_tiling_reference' since it already exists with aliases '['will-greenleaf:K562_CRISPR_tiling_reference']'. 2019-11-26 00:33:21,002:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:33:21,007:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:33:21,307:eu_debug: submission=True: In submission mode. 2019-11-26 00:33:21,335:eu_debug: IN post(). 2019-11-26 00:33:21,336:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T14-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:21,496:eu_debug: Success. 2019-11-26 00:33:21,496:eu_debug: IN post(). 2019-11-26 00:33:21,497:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14-R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T14-R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:21,651:eu_debug: Success. 2019-11-26 00:33:21,651:eu_debug: IN post(). 2019-11-26 00:33:21,652:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T14-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:21,816:eu_debug: Success. 2019-11-26 00:33:21,817:eu_debug: IN post(). 2019-11-26 00:33:21,817:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14-R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14-R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T14-R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:21,979:eu_debug: Success. 2019-11-26 00:33:21,979:eu_debug: IN post(). 2019-11-26 00:33:21,980:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T14-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:22,139:eu_debug: Success. 2019-11-26 00:33:22,139:eu_debug: IN post(). 2019-11-26 00:33:22,140:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14-R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14-R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T14-R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:22,297:eu_debug: Success. 2019-11-26 00:33:22,297:eu_debug: IN post(). 2019-11-26 00:33:22,298:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T14-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:22,456:eu_debug: Success. 2019-11-26 00:33:22,456:eu_debug: IN post(). 2019-11-26 00:33:22,456:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14-R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14-R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T14-R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:22,610:eu_debug: Success. 2019-11-26 00:33:22,610:eu_debug: IN post(). 2019-11-26 00:33:22,611:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T0-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T0-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:22,773:eu_debug: Success. 2019-11-26 00:33:22,773:eu_debug: IN post(). 2019-11-26 00:33:22,773:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T0-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T0-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:22,927:eu_debug: Success. 2019-11-26 00:33:22,928:eu_debug: IN post(). 2019-11-26 00:33:22,928:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T0-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T0-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:23,087:eu_debug: Success. 2019-11-26 00:33:23,087:eu_debug: IN post(). 2019-11-26 00:33:23,088:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T0-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T0-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2019-11-26 00:33:23,252:eu_debug: Success. 2019-11-26 00:33:34,403:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:33:34,409:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:33:34,697:eu_debug: submission=True: In submission mode. 2019-11-26 00:33:34,721:eu_debug: IN post(). 2019-11-26 00:33:34,722:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling_T0", "library": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:33:34,879:eu_debug: Failed to POST will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1 2019-11-26 00:33:34,880:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-26 00:33:34,880:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562_CRISPRa_tiling_T0' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-26 00:34:28,890:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:34:28,895:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:34:29,210:eu_debug: submission=True: In submission mode. 2019-11-26 00:34:29,224:eu_debug: IN post(). 2019-11-26 00:34:29,225:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling-T0", "library": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:34:29,375:eu_debug: Success. 2019-11-26 00:34:29,375:eu_debug: IN post(). 2019-11-26 00:34:29,376:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling-T0", "library": "will-greenleaf:K562_CRISPRd_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:34:29,531:eu_debug: Success. 2019-11-26 00:34:29,532:eu_debug: IN post(). 2019-11-26 00:34:29,532:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling-T0", "library": "will-greenleaf:K562_CRISPRk_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:34:29,690:eu_debug: Success. 2019-11-26 00:34:29,691:eu_debug: IN post(). 2019-11-26 00:34:29,691:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling-T0", "library": "will-greenleaf:K562_CRISPRi_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:34:29,843:eu_debug: Success. 2019-11-26 00:34:29,843:eu_debug: IN post(). 2019-11-26 00:34:29,844:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling-T14", "library": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:34:29,988:eu_debug: Success. 2019-11-26 00:34:29,988:eu_debug: IN post(). 2019-11-26 00:34:29,989:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling-T14", "library": "will-greenleaf:K562_CRISPRd_tiling_T14-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:34:30,145:eu_debug: Success. 2019-11-26 00:34:30,145:eu_debug: IN post(). 2019-11-26 00:34:30,146:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling-T14", "library": "will-greenleaf:K562_CRISPRk_tiling_T14-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:34:30,311:eu_debug: Success. 2019-11-26 00:34:30,311:eu_debug: IN post(). 2019-11-26 00:34:30,312:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling-T14", "library": "will-greenleaf:K562_CRISPRi_tiling_T14-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:34:30,474:eu_debug: Success. 2019-11-26 00:34:30,474:eu_debug: IN post(). 2019-11-26 00:34:30,475:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14-R2_T2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R2_T2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRa_tiling-T14", "library": "will-greenleaf:K562_CRISPRa_tiling_T14-R2_library", "technical_replicate_number": 1 } 2019-11-26 00:34:30,634:eu_debug: Success. 2019-11-26 00:34:30,634:eu_debug: IN post(). 2019-11-26 00:34:30,635:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T14-R2_T2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14-R2_T2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRd_tiling-T14", "library": "will-greenleaf:K562_CRISPRd_tiling_T14-R2_library", "technical_replicate_number": 1 } 2019-11-26 00:34:30,783:eu_debug: Success. 2019-11-26 00:34:30,784:eu_debug: IN post(). 2019-11-26 00:34:30,784:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T14-R2_T2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14-R2_T2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRk_tiling-T14", "library": "will-greenleaf:K562_CRISPRk_tiling_T14-R2_library", "technical_replicate_number": 1 } 2019-11-26 00:34:30,944:eu_debug: Success. 2019-11-26 00:34:30,945:eu_debug: IN post(). 2019-11-26 00:34:30,945:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T14-R2_T2 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14-R2_T2" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRi_tiling-T14", "library": "will-greenleaf:K562_CRISPRi_tiling_T14-R2_library", "technical_replicate_number": 1 } 2019-11-26 00:34:31,104:eu_debug: Success. 2019-11-26 00:35:32,309:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:35:32,316:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:35:32,687:eu_debug: submission=True: In submission mode. 2019-11-26 00:35:32,728:eu_debug: IN post(). 2019-11-26 00:35:33,226:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1-T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-26 00:35:33,400:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-26 00:35:33,400:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-26 00:35:33,400:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562_CRISPRa_tiling_T0-R1-T1' not found", "location": "body", "name": [ "replicate" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-26 00:35:46,618:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:35:46,625:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:35:46,913:eu_debug: submission=True: In submission mode. 2019-11-26 00:35:46,926:eu_debug: IN post(). 2019-11-26 00:35:47,371:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1-T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-26 00:35:47,543:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-26 00:35:47,543:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-26 00:35:47,543:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562_CRISPRa_tiling_T0-R1-T1' not found", "location": "body", "name": [ "replicate" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-26 00:40:42,082:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:40:42,090:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:40:42,409:eu_debug: submission=True: In submission mode. 2019-11-26 00:40:43,576:eu_debug: IN post(). 2019-11-26 00:40:44,329:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0-R1_library", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1-T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-26 00:40:44,522:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz 2019-11-26 00:40:44,523:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-26 00:40:44,523:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562_CRISPRa_tiling-T0-R1_library' not found", "location": "body", "name": [ "dataset" ] }, { "description": "'will-greenleaf:K562_CRISPRa_tiling_T0-R1-T1' not found", "location": "body", "name": [ "replicate" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-26 00:43:50,896:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:43:50,904:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:43:51,200:eu_debug: submission=True: In submission mode. 2019-11-26 00:43:52,376:eu_debug: IN post(). 2019-11-26 00:43:52,992:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-26 00:43:53,550:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz')]", 'title': 'Conflict', 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409} 2019-11-26 00:43:53,551:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2019-11-26 00:43:53,902:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2019-11-26 00:43:53,903:eu_debug: IN post(). 2019-11-26 00:43:54,758:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2019-11-26 00:43:55,306:eu_debug: {'@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz'), ('alias', 'md5:122fdcdbcdfeb6c6606368f434b5ad0d')]", 'title': 'Conflict', 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409} 2019-11-26 00:43:55,306:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz/?format=json&datastore=database 2019-11-26 00:43:55,661:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz']'. 2019-11-26 00:43:55,662:eu_debug: IN post(). 2019-11-26 00:43:58,303:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 185739290, "lab": "/labs/will-greenleaf/", "md5sum": "a614d15de47f2b7eb05aea9281c0d2ae", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T2", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" } 2019-11-26 00:43:58,470:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz 2019-11-26 00:43:58,470:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-26 00:43:58,470:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562_CRISPRa_tiling_T14-R1_T2' not found", "location": "body", "name": [ "replicate" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-26 00:45:38,069:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:45:38,073:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:45:38,382:eu_debug: submission=True: In submission mode. 2019-11-26 00:45:40,287:eu_debug: IN post(). 2019-11-26 00:45:41,267:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-26 00:45:41,817:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz'), ('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843')]", 'title': 'Conflict', '@type': ['HTTPConflict', 'Error'], 'status': 'error', 'code': 409, 'description': 'There was a conflict when trying to complete your request.'} 2019-11-26 00:45:41,817:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2019-11-26 00:45:42,157:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2019-11-26 00:45:42,157:eu_debug: IN post(). 2019-11-26 00:45:43,889:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2019-11-26 00:45:45,623:eu_debug: {'detail': "Keys conflict: [('alias', 'md5:122fdcdbcdfeb6c6606368f434b5ad0d'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz')]", 'title': 'Conflict', '@type': ['HTTPConflict', 'Error'], 'status': 'error', 'code': 409, 'description': 'There was a conflict when trying to complete your request.'} 2019-11-26 00:45:45,623:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz/?format=json&datastore=database 2019-11-26 00:45:46,967:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz']'. 2019-11-26 00:45:47,746:eu_debug: IN post(). 2019-11-26 00:45:48,886:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 185739290, "lab": "/labs/will-greenleaf/", "md5sum": "a614d15de47f2b7eb05aea9281c0d2ae", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T2", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" } 2019-11-26 00:45:49,056:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz 2019-11-26 00:45:49,056:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-26 00:45:49,056:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562_CRISPRa_tiling_T14-R1_T2' not found", "location": "body", "name": [ "replicate" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-26 00:48:34,552:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:48:34,559:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:48:34,854:eu_debug: submission=True: In submission mode. 2019-11-26 00:48:36,071:eu_debug: IN post(). 2019-11-26 00:48:36,785:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2019-11-26 00:48:37,324:eu_debug: {'status': 'error', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz'), ('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843')]", 'title': 'Conflict', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.'} 2019-11-26 00:48:37,324:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2019-11-26 00:48:37,675:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2019-11-26 00:48:37,676:eu_debug: IN post(). 2019-11-26 00:48:38,439:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2019-11-26 00:48:38,963:eu_debug: {'status': 'error', 'code': 409, 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz'), ('alias', 'md5:122fdcdbcdfeb6c6606368f434b5ad0d')]", 'title': 'Conflict', '@type': ['HTTPConflict', 'Error'], 'description': 'There was a conflict when trying to complete your request.'} 2019-11-26 00:48:38,963:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz/?format=json&datastore=database 2019-11-26 00:48:39,321:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz']'. 2019-11-26 00:48:39,322:eu_debug: IN post(). 2019-11-26 00:48:41,073:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 185739290, "lab": "/labs/will-greenleaf/", "md5sum": "a614d15de47f2b7eb05aea9281c0d2ae", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" } 2019-11-26 00:48:41,249:eu_debug: Failed to POST will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz 2019-11-26 00:48:41,249:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-26 00:48:41,249:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1' not found", "location": "body", "name": [ "replicate" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-26 00:53:30,597:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:53:30,602:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:53:30,892:eu_debug: submission=True: In submission mode. 2019-11-26 00:53:30,912:eu_debug: IN post(). 2019-11-26 00:53:30,913:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling_T0", "library": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:53:31,062:eu_debug: Failed to POST will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1 2019-11-26 00:53:31,062:eu_debug: <<<<<< DCC POST RESPONSE: 2019-11-26 00:53:31,063:eu_debug: { "@type": [ "ValidationFailure", "Error" ], "code": 422, "description": "Failed validation", "errors": [ { "description": "'will-greenleaf:K562_CRISPRa_tiling_T0' is not of type 'Experiment', 'FunctionalCharacterizationExperiment'", "location": "body", "name": [ "experiment" ] } ], "status": "error", "title": "Unprocessable Entity" } 2019-11-26 00:54:12,730:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:54:12,736:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:54:13,019:eu_debug: submission=True: In submission mode. 2019-11-26 00:54:13,040:eu_debug: IN post(). 2019-11-26 00:54:13,041:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling-T0", "library": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:54:13,198:eu_debug: {'title': 'Conflict', 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('replicate:experiment_biological_technical', 'ee92b9d4-b01c-484a-9669-078660503bbd/1/1'), ('alias', 'will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1')]"} 2019-11-26 00:54:13,199:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1/?format=json&datastore=database 2019-11-26 00:54:13,441:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1']'. 2019-11-26 00:54:13,441:eu_debug: IN post(). 2019-11-26 00:54:13,442:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling-T0", "library": "will-greenleaf:K562_CRISPRd_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:54:13,603:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1'), ('replicate:experiment_biological_technical', '1aa70848-c743-4373-8870-caf866c922d4/1/1')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict'} 2019-11-26 00:54:13,604:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1/?format=json&datastore=database 2019-11-26 00:54:13,853:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1']'. 2019-11-26 00:54:13,854:eu_debug: IN post(). 2019-11-26 00:54:13,854:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling-T0", "library": "will-greenleaf:K562_CRISPRk_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:54:14,020:eu_debug: {'detail': "Keys conflict: [('replicate:experiment_biological_technical', 'ce3288fc-c8a1-411a-b76f-9d6597497a68/1/1'), ('alias', 'will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict'} 2019-11-26 00:54:14,020:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1/?format=json&datastore=database 2019-11-26 00:54:14,264:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1']'. 2019-11-26 00:54:14,265:eu_debug: IN post(). 2019-11-26 00:54:14,265:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling-T0", "library": "will-greenleaf:K562_CRISPRi_tiling_T0-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:54:14,417:eu_debug: {'detail': "Keys conflict: [('replicate:experiment_biological_technical', '251085d1-a883-46a7-8220-c569d33ae394/1/1'), ('alias', 'will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict'} 2019-11-26 00:54:14,418:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1/?format=json&datastore=database 2019-11-26 00:54:14,659:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1']'. 2019-11-26 00:54:14,660:eu_debug: IN post(). 2019-11-26 00:54:14,660:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling-T14", "library": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:54:14,826:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1'), ('replicate:experiment_biological_technical', 'ef1dae87-e956-48f0-860c-d2339e038b07/1/1')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict'} 2019-11-26 00:54:14,826:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1/?format=json&datastore=database 2019-11-26 00:54:15,092:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1']'. 2019-11-26 00:54:15,093:eu_debug: IN post(). 2019-11-26 00:54:15,093:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling-T14", "library": "will-greenleaf:K562_CRISPRd_tiling_T14-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:54:15,256:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1'), ('replicate:experiment_biological_technical', 'ba1175cb-9fb8-4c5f-8650-2fdb0370e48f/1/1')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict'} 2019-11-26 00:54:15,256:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1/?format=json&datastore=database 2019-11-26 00:54:15,516:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1']'. 2019-11-26 00:54:15,517:eu_debug: IN post(). 2019-11-26 00:54:15,517:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling-T14", "library": "will-greenleaf:K562_CRISPRk_tiling_T14-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:54:15,676:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1'), ('replicate:experiment_biological_technical', '222f1ab1-62f2-4621-9335-e4d0ec20bb7b/1/1')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict'} 2019-11-26 00:54:15,677:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1/?format=json&datastore=database 2019-11-26 00:54:15,948:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1']'. 2019-11-26 00:54:15,948:eu_debug: IN post(). 2019-11-26 00:54:15,949:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling-T14", "library": "will-greenleaf:K562_CRISPRi_tiling_T14-R1_library", "technical_replicate_number": 1 } 2019-11-26 00:54:16,111:eu_debug: {'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1'), ('replicate:experiment_biological_technical', '9cbc6b16-fa90-49ad-8d9b-6cf89fb42dea/1/1')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict'} 2019-11-26 00:54:16,111:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1/?format=json&datastore=database 2019-11-26 00:54:16,394:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1']'. 2019-11-26 00:54:16,395:eu_debug: IN post(). 2019-11-26 00:54:16,395:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRa_tiling-T14", "library": "will-greenleaf:K562_CRISPRa_tiling_T14-R2_library", "technical_replicate_number": 1 } 2019-11-26 00:54:16,553:eu_debug: {'detail': "Keys conflict: [('replicate:experiment_biological_technical', 'ef1dae87-e956-48f0-860c-d2339e038b07/2/1')]", 'description': 'There was a conflict when trying to complete your request.', 'status': 'error', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'title': 'Conflict'} 2019-11-26 00:54:16,554:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1/?format=json&datastore=database 2019-11-26 00:54:16,698:eu_debug: NOT FOUND 2019-11-26 00:57:32,340:eu_debug: Connecting to test.encodedcc.org 2019-11-26 00:57:32,344:eu_debug: submission=False: In non-submission mode. 2019-11-26 00:57:32,636:eu_debug: submission=True: In submission mode. 2019-11-26 00:57:32,651:eu_debug: IN post(). 2019-11-26 00:57:32,652:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:57:32,816:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling-T0')]", 'status': 'error', 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:57:32,816:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling-T0/?format=json&datastore=database 2019-11-26 00:57:33,078:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling-T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling-T0']'. 2019-11-26 00:57:33,079:eu_debug: IN post(). 2019-11-26 00:57:33,079:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:57:33,237:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling-T0')]", 'status': 'error', 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:57:33,237:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling-T0/?format=json&datastore=database 2019-11-26 00:57:33,501:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling-T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling-T0']'. 2019-11-26 00:57:33,502:eu_debug: IN post(). 2019-11-26 00:57:33,502:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:57:33,652:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling-T0')]", 'status': 'error', 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:57:33,653:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling-T0/?format=json&datastore=database 2019-11-26 00:57:33,910:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling-T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling-T0']'. 2019-11-26 00:57:33,911:eu_debug: IN post(). 2019-11-26 00:57:33,912:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:57:34,067:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling-T0')]", 'status': 'error', 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:57:34,068:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling-T0 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling-T0/?format=json&datastore=database 2019-11-26 00:57:34,325:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling-T0' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling-T0']'. 2019-11-26 00:57:34,326:eu_debug: IN post(). 2019-11-26 00:57:34,327:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:57:34,484:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRa_tiling-T14')]", 'status': 'error', 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:57:34,485:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRa_tiling-T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRa_tiling-T14/?format=json&datastore=database 2019-11-26 00:57:34,780:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRa_tiling-T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRa_tiling-T14']'. 2019-11-26 00:57:34,781:eu_debug: IN post(). 2019-11-26 00:57:34,782:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:57:34,933:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRd_tiling-T14')]", 'status': 'error', 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:57:34,934:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRd_tiling-T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRd_tiling-T14/?format=json&datastore=database 2019-11-26 00:57:35,233:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRd_tiling-T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRd_tiling-T14']'. 2019-11-26 00:57:35,233:eu_debug: IN post(). 2019-11-26 00:57:35,234:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:57:35,393:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRk_tiling-T14')]", 'status': 'error', 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:57:35,393:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRk_tiling-T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRk_tiling-T14/?format=json&datastore=database 2019-11-26 00:57:35,687:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRk_tiling-T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRk_tiling-T14']'. 2019-11-26 00:57:35,687:eu_debug: IN post(). 2019-11-26 00:57:35,688:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2019-11-26 00:57:35,851:eu_debug: {'code': 409, 'description': 'There was a conflict when trying to complete your request.', 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPRi_tiling-T14')]", 'status': 'error', 'title': 'Conflict', '@type': ['HTTPConflict', 'Error']} 2019-11-26 00:57:35,851:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPRi_tiling-T14 From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPRi_tiling-T14/?format=json&datastore=database 2019-11-26 00:57:36,149:eu_debug: Will not POST 'will-greenleaf:K562_CRISPRi_tiling-T14' since it already exists with aliases '['will-greenleaf:K562_CRISPRi_tiling-T14']'. 2020-02-25 13:49:38,577:eu_debug: Connecting to test.encodedcc.org 2020-02-25 13:49:38,578:eu_debug: submission=False: In non-submission mode. 2020-02-25 13:49:57,146:eu_debug: Connecting to test.encodedcc.org 2020-02-25 13:49:57,147:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:10:14,211:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:10:14,212:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:13:30,918:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:13:30,919:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:13:31,171:eu_debug: submission=True: In submission mode. 2020-02-25 14:13:31,196:eu_debug: IN post(). 2020-02-25 14:13:31,197:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2020-02-25 14:13:31,319:eu_debug: Success. 2020-02-25 14:13:31,320:eu_debug: IN post(). 2020-02-25 14:13:31,321:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2020-02-25 14:13:31,440:eu_debug: Success. 2020-02-25 14:13:31,440:eu_debug: IN post(). 2020-02-25 14:13:31,441:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2020-02-25 14:13:31,555:eu_debug: Success. 2020-02-25 14:13:31,555:eu_debug: IN post(). 2020-02-25 14:13:31,556:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling-T0 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling-T0" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2020-02-25 14:13:31,671:eu_debug: Success. 2020-02-25 14:13:31,671:eu_debug: IN post(). 2020-02-25 14:13:31,672:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRa_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2020-02-25 14:13:31,788:eu_debug: Success. 2020-02-25 14:13:31,788:eu_debug: IN post(). 2020-02-25 14:13:31,789:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRd_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2020-02-25 14:13:31,900:eu_debug: Success. 2020-02-25 14:13:31,900:eu_debug: IN post(). 2020-02-25 14:13:31,901:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRk_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2020-02-25 14:13:32,017:eu_debug: Success. 2020-02-25 14:13:32,018:eu_debug: IN post(). 2020-02-25 14:13:32,018:eu_debug: <<<<<< POST functional_characterization_experiment record will-greenleaf:K562_CRISPRi_tiling-T14 To DCC with URL https://test.encodedcc.org/functional_characterization_experiment and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling-T14" ], "assay_term_name": "CRISPR screen", "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "elements_references": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "lab": "/labs/will-greenleaf/" } 2020-02-25 14:13:32,133:eu_debug: Success. 2020-02-25 14:13:37,028:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:13:37,030:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:13:37,256:eu_debug: submission=True: In submission mode. 2020-02-25 14:13:37,267:eu_debug: IN post(). 2020-02-25 14:13:37,268:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T0-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T0-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:37,396:eu_debug: Success. 2020-02-25 14:13:37,397:eu_debug: IN post(). 2020-02-25 14:13:37,397:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T0-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T0-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:37,518:eu_debug: Success. 2020-02-25 14:13:37,518:eu_debug: IN post(). 2020-02-25 14:13:37,519:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T0-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T0-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:37,640:eu_debug: Success. 2020-02-25 14:13:37,640:eu_debug: IN post(). 2020-02-25 14:13:37,641:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T0-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T0-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:37,758:eu_debug: Success. 2020-02-25 14:13:37,758:eu_debug: IN post(). 2020-02-25 14:13:37,759:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T14-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T14-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:37,883:eu_debug: Success. 2020-02-25 14:13:37,883:eu_debug: IN post(). 2020-02-25 14:13:37,884:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T14-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T14-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:38,011:eu_debug: Success. 2020-02-25 14:13:38,011:eu_debug: IN post(). 2020-02-25 14:13:38,012:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T14-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T14-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:38,129:eu_debug: Success. 2020-02-25 14:13:38,129:eu_debug: IN post(). 2020-02-25 14:13:38,130:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T14-R1 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T14-R1" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:38,249:eu_debug: Success. 2020-02-25 14:13:38,250:eu_debug: IN post(). 2020-02-25 14:13:38,250:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRa_tiling_screen_T14-R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_screen_T14-R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:38,364:eu_debug: Success. 2020-02-25 14:13:38,364:eu_debug: IN post(). 2020-02-25 14:13:38,365:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRi_tiling_screen_T14-R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_screen_T14-R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:38,485:eu_debug: Success. 2020-02-25 14:13:38,485:eu_debug: IN post(). 2020-02-25 14:13:38,486:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRk_tiling_screen_T14-R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_screen_T14-R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:38,603:eu_debug: Success. 2020-02-25 14:13:38,604:eu_debug: IN post(). 2020-02-25 14:13:38,604:eu_debug: <<<<<< POST biosample record will-greenleaf:K562_CRISPRd_tiling_screen_T14-R2 To DCC with URL https://test.encodedcc.org/biosample and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_screen_T14-R2" ], "award": "/awards/UM1HG009436/", "biosample_ontology": "encode:K562", "lab": "/labs/will-greenleaf/", "organism": "human", "source": "/sources/michael-bassik/" } 2020-02-25 14:13:38,725:eu_debug: Success. 2020-02-25 14:13:42,042:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:13:42,043:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:13:42,267:eu_debug: submission=True: In submission mode. 2020-02-25 14:13:42,289:eu_debug: IN post(). 2020-02-25 14:13:42,290:eu_debug: <<<<<< POST reference record will-greenleaf:K562_CRISPR_tiling_reference To DCC with URL https://test.encodedcc.org/reference and this payload: { "aliases": [ "will-greenleaf:K562_CRISPR_tiling_reference" ], "award": "/awards/UM1HG009436/", "lab": "/labs/will-greenleaf/", "reference_type": "functional elements" } 2020-02-25 14:13:42,398:eu_debug: {'title': 'Conflict', 'description': 'There was a conflict when trying to complete your request.', 'code': 409, '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:K562_CRISPR_tiling_reference')]", 'status': 'error'} 2020-02-25 14:13:42,398:eu_debug: >>>>>>GET will-greenleaf:K562_CRISPR_tiling_reference From DCC with URL https://test.encodedcc.org/will-greenleaf:K562_CRISPR_tiling_reference/?format=json&datastore=database 2020-02-25 14:13:42,568:eu_debug: Will not POST 'will-greenleaf:K562_CRISPR_tiling_reference' since it already exists with aliases '['will-greenleaf:K562_CRISPR_tiling_reference']'. 2020-02-25 14:14:06,805:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:14:06,807:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:14:07,045:eu_debug: submission=True: In submission mode. 2020-02-25 14:14:07,056:eu_debug: IN post(). 2020-02-25 14:14:07,056:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T14-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:07,167:eu_debug: Success. 2020-02-25 14:14:07,167:eu_debug: IN post(). 2020-02-25 14:14:07,168:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T14-R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T14-R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:07,278:eu_debug: Success. 2020-02-25 14:14:07,278:eu_debug: IN post(). 2020-02-25 14:14:07,278:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T14-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:07,393:eu_debug: Success. 2020-02-25 14:14:07,393:eu_debug: IN post(). 2020-02-25 14:14:07,394:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T14-R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14-R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T14-R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:07,505:eu_debug: Success. 2020-02-25 14:14:07,505:eu_debug: IN post(). 2020-02-25 14:14:07,506:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T14-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:07,620:eu_debug: Success. 2020-02-25 14:14:07,620:eu_debug: IN post(). 2020-02-25 14:14:07,621:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T14-R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14-R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T14-R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:07,727:eu_debug: Success. 2020-02-25 14:14:07,727:eu_debug: IN post(). 2020-02-25 14:14:07,728:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T14-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:07,842:eu_debug: Success. 2020-02-25 14:14:07,842:eu_debug: IN post(). 2020-02-25 14:14:07,843:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T14-R2_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14-R2_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T14-R2", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:07,948:eu_debug: Success. 2020-02-25 14:14:07,949:eu_debug: IN post(). 2020-02-25 14:14:07,950:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRa_tiling_T0-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRa_tiling_screen_T0-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:08,062:eu_debug: Success. 2020-02-25 14:14:08,062:eu_debug: IN post(). 2020-02-25 14:14:08,063:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRd_tiling_T0-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRd_tiling_screen_T0-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:08,182:eu_debug: Success. 2020-02-25 14:14:08,183:eu_debug: IN post(). 2020-02-25 14:14:08,183:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRk_tiling_T0-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRk_tiling_screen_T0-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:08,297:eu_debug: Success. 2020-02-25 14:14:08,297:eu_debug: IN post(). 2020-02-25 14:14:08,298:eu_debug: <<<<<< POST library record will-greenleaf:K562_CRISPRi_tiling_T0-R1_library To DCC with URL https://test.encodedcc.org/library and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0-R1_library" ], "award": "/awards/UM1HG009436/", "biosample": "will-greenleaf:K562_CRISPRi_tiling_screen_T0-R1", "lab": "/labs/will-greenleaf/", "nucleic_acid_term_name": "DNA" } 2020-02-25 14:14:08,410:eu_debug: Success. 2020-02-25 14:14:12,254:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:14:12,255:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:14:12,480:eu_debug: submission=True: In submission mode. 2020-02-25 14:14:12,507:eu_debug: IN post(). 2020-02-25 14:14:12,508:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling-T0", "library": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_library", "technical_replicate_number": 1 } 2020-02-25 14:14:12,619:eu_debug: Success. 2020-02-25 14:14:12,619:eu_debug: IN post(). 2020-02-25 14:14:12,620:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling-T0", "library": "will-greenleaf:K562_CRISPRd_tiling_T0-R1_library", "technical_replicate_number": 1 } 2020-02-25 14:14:12,730:eu_debug: Success. 2020-02-25 14:14:12,730:eu_debug: IN post(). 2020-02-25 14:14:12,731:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling-T0", "library": "will-greenleaf:K562_CRISPRk_tiling_T0-R1_library", "technical_replicate_number": 1 } 2020-02-25 14:14:12,836:eu_debug: Success. 2020-02-25 14:14:12,837:eu_debug: IN post(). 2020-02-25 14:14:12,837:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling-T0", "library": "will-greenleaf:K562_CRISPRi_tiling_T0-R1_library", "technical_replicate_number": 1 } 2020-02-25 14:14:12,944:eu_debug: Success. 2020-02-25 14:14:12,945:eu_debug: IN post(). 2020-02-25 14:14:12,945:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRa_tiling-T14", "library": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_library", "technical_replicate_number": 1 } 2020-02-25 14:14:13,056:eu_debug: Success. 2020-02-25 14:14:13,056:eu_debug: IN post(). 2020-02-25 14:14:13,057:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRd_tiling-T14", "library": "will-greenleaf:K562_CRISPRd_tiling_T14-R1_library", "technical_replicate_number": 1 } 2020-02-25 14:14:13,160:eu_debug: Success. 2020-02-25 14:14:13,160:eu_debug: IN post(). 2020-02-25 14:14:13,161:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRk_tiling-T14", "library": "will-greenleaf:K562_CRISPRk_tiling_T14-R1_library", "technical_replicate_number": 1 } 2020-02-25 14:14:13,267:eu_debug: Success. 2020-02-25 14:14:13,268:eu_debug: IN post(). 2020-02-25 14:14:13,268:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1" ], "biological_replicate_number": 1, "experiment": "will-greenleaf:K562_CRISPRi_tiling-T14", "library": "will-greenleaf:K562_CRISPRi_tiling_T14-R1_library", "technical_replicate_number": 1 } 2020-02-25 14:14:13,375:eu_debug: Success. 2020-02-25 14:14:13,376:eu_debug: IN post(). 2020-02-25 14:14:13,376:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRa_tiling-T14", "library": "will-greenleaf:K562_CRISPRa_tiling_T14-R2_library", "technical_replicate_number": 1 } 2020-02-25 14:14:13,486:eu_debug: Success. 2020-02-25 14:14:13,487:eu_debug: IN post(). 2020-02-25 14:14:13,487:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRd_tiling_T14-R2_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRd_tiling_T14-R2_T1" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRd_tiling-T14", "library": "will-greenleaf:K562_CRISPRd_tiling_T14-R2_library", "technical_replicate_number": 1 } 2020-02-25 14:14:13,595:eu_debug: Success. 2020-02-25 14:14:13,595:eu_debug: IN post(). 2020-02-25 14:14:13,596:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRk_tiling_T14-R2_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRk_tiling_T14-R2_T1" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRk_tiling-T14", "library": "will-greenleaf:K562_CRISPRk_tiling_T14-R2_library", "technical_replicate_number": 1 } 2020-02-25 14:14:13,710:eu_debug: Success. 2020-02-25 14:14:13,711:eu_debug: IN post(). 2020-02-25 14:14:13,711:eu_debug: <<<<<< POST replicate record will-greenleaf:K562_CRISPRi_tiling_T14-R2_T1 To DCC with URL https://test.encodedcc.org/replicate and this payload: { "aliases": [ "will-greenleaf:K562_CRISPRi_tiling_T14-R2_T1" ], "biological_replicate_number": 2, "experiment": "will-greenleaf:K562_CRISPRi_tiling-T14", "library": "will-greenleaf:K562_CRISPRi_tiling_T14-R2_library", "technical_replicate_number": 1 } 2020-02-25 14:14:13,823:eu_debug: Success. 2020-02-25 14:14:18,581:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:14:18,582:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:14:18,812:eu_debug: submission=True: In submission mode. 2020-02-25 14:14:18,839:eu_debug: IN post(). 2020-02-25 14:14:21,698:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2020-02-25 14:14:22,255:eu_debug: Success. 2020-02-25 14:14:22,255:eu_debug: IN upload_file() 2020-02-25 14:14:22,255:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:14:22,788:eu_debug: Success: upload credentials for 'TSTFF070397' regenerated. 2020-02-25 14:14:22,788:eu_debug: >>>>>>GET TSTFF070397 From DCC with URL https://test.encodedcc.org/TSTFF070397/?format=json&datastore=database 2020-02-25 14:14:23,081:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T0.fastq.gz s3://encoded-files-dev/2020/02/25/91b70206-8180-47de-a55c-715d71df92ba/TSTFF070397.fastq.gz'. 2020-02-25 14:14:23,420:eu_debug: Failed to upload file 'CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' for TSTFF070397. 2020-02-25 14:14:23,420:eu_debug: Subprocess command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T0.fastq.gz s3://encoded-files-dev/2020/02/25/91b70206-8180-47de-a55c-715d71df92ba/TSTFF070397.fastq.gz' failed with return code '127'. Stdout is ''. Stderr is '/bin/sh: 1: aws: not found '. 2020-02-25 14:16:24,188:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:16:24,189:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:16:24,437:eu_debug: submission=True: In submission mode. 2020-02-25 14:16:24,447:eu_debug: IN post(). 2020-02-25 14:16:24,837:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2020-02-25 14:16:25,299:eu_debug: {'code': 409, 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz'), ('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error']} 2020-02-25 14:16:25,299:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2020-02-25 14:16:26,587:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2020-02-25 14:16:26,588:eu_debug: IN post(). 2020-02-25 14:16:29,022:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2020-02-25 14:16:29,600:eu_debug: Success. 2020-02-25 14:16:29,600:eu_debug: IN upload_file() 2020-02-25 14:16:29,600:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:16:30,108:eu_debug: Success: upload credentials for 'TSTFF762003' regenerated. 2020-02-25 14:16:30,109:eu_debug: >>>>>>GET TSTFF762003 From DCC with URL https://test.encodedcc.org/TSTFF762003/?format=json&datastore=database 2020-02-25 14:16:30,604:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz s3://encoded-files-dev/2020/02/25/c1fac1ee-c0e3-40c1-bd94-f2aa61f27c0c/TSTFF762003.fastq.gz'. 2020-02-25 14:16:31,354:eu_debug: Failed to upload file 'CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' for TSTFF762003. 2020-02-25 14:16:31,354:eu_debug: Subprocess command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz s3://encoded-files-dev/2020/02/25/c1fac1ee-c0e3-40c1-bd94-f2aa61f27c0c/TSTFF762003.fastq.gz' failed with return code '127'. Stdout is ''. Stderr is '/bin/sh: 1: aws: not found '. 2020-02-25 14:17:50,972:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:17:50,973:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:17:51,215:eu_debug: submission=True: In submission mode. 2020-02-25 14:17:51,226:eu_debug: IN post(). 2020-02-25 14:17:51,578:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2020-02-25 14:17:52,047:eu_debug: {'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz')]", '@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.'} 2020-02-25 14:17:52,048:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2020-02-25 14:17:52,287:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2020-02-25 14:17:52,287:eu_debug: IN post(). 2020-02-25 14:17:52,621:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2020-02-25 14:17:53,107:eu_debug: {'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'md5:122fdcdbcdfeb6c6606368f434b5ad0d'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz')]", '@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.'} 2020-02-25 14:17:53,108:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz/?format=json&datastore=database 2020-02-25 14:17:53,379:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz']'. 2020-02-25 14:17:53,380:eu_debug: IN post(). 2020-02-25 14:17:56,376:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 185739290, "lab": "/labs/will-greenleaf/", "md5sum": "a614d15de47f2b7eb05aea9281c0d2ae", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" } 2020-02-25 14:17:56,864:eu_debug: Success. 2020-02-25 14:17:56,865:eu_debug: IN upload_file() 2020-02-25 14:17:56,865:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:17:57,338:eu_debug: Success: upload credentials for 'TSTFF282732' regenerated. 2020-02-25 14:17:57,339:eu_debug: >>>>>>GET TSTFF282732 From DCC with URL https://test.encodedcc.org/TSTFF282732/?format=json&datastore=database 2020-02-25 14:17:57,613:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz s3://encoded-files-dev/2020/02/25/f2dc5938-efe9-486e-b432-cbdc7caa976d/TSTFF282732.fastq.gz'. 2020-02-25 14:17:57,884:eu_debug: Failed to upload file 'CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz' for TSTFF282732. 2020-02-25 14:17:57,885:eu_debug: Subprocess command 'aws s3 cp CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz s3://encoded-files-dev/2020/02/25/f2dc5938-efe9-486e-b432-cbdc7caa976d/TSTFF282732.fastq.gz' failed with return code '127'. Stdout is ''. Stderr is '/bin/sh: 1: aws: not found '. 2020-02-25 14:20:18,290:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:20:18,291:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:20:18,845:eu_debug: submission=True: In submission mode. 2020-02-25 14:20:18,856:eu_debug: IN post(). 2020-02-25 14:20:19,189:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2020-02-25 14:20:19,656:eu_debug: {'detail': "Keys conflict: [('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2020-02-25 14:20:19,656:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2020-02-25 14:20:19,952:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2020-02-25 14:20:19,952:eu_debug: IN post(). 2020-02-25 14:20:20,227:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2020-02-25 14:20:20,751:eu_debug: {'code': 409, 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz'), ('alias', 'md5:122fdcdbcdfeb6c6606368f434b5ad0d')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error']} 2020-02-25 14:20:20,752:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz/?format=json&datastore=database 2020-02-25 14:20:21,102:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz']'. 2020-02-25 14:20:21,102:eu_debug: IN post(). 2020-02-25 14:20:21,429:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 185739290, "lab": "/labs/will-greenleaf/", "md5sum": "a614d15de47f2b7eb05aea9281c0d2ae", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" } 2020-02-25 14:20:21,936:eu_debug: {'code': 409, 'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz'), ('alias', 'md5:a614d15de47f2b7eb05aea9281c0d2ae')]", 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error']} 2020-02-25 14:20:21,936:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz/?format=json&datastore=database 2020-02-25 14:20:22,249:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz']'. 2020-02-25 14:20:22,249:eu_debug: IN post(). 2020-02-25 14:20:27,369:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRi_tiling-T0", "file_format": "fastq", "file_size": 191195503, "lab": "/labs/will-greenleaf/", "md5sum": "eabc7054ea1d767c90811bc46557d6bf", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRi_T0.fastq.gz" } 2020-02-25 14:20:27,887:eu_debug: Success. 2020-02-25 14:20:27,889:eu_debug: IN upload_file() 2020-02-25 14:20:27,889:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:20:28,394:eu_debug: Success: upload credentials for 'TSTFF061492' regenerated. 2020-02-25 14:20:28,394:eu_debug: >>>>>>GET TSTFF061492 From DCC with URL https://test.encodedcc.org/TSTFF061492/?format=json&datastore=database 2020-02-25 14:20:28,664:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRi_T0.fastq.gz s3://encoded-files-dev/2020/02/25/1c8591ca-0007-4e30-9ca8-1b7b1b83044c/TSTFF061492.fastq.gz'. 2020-02-25 14:20:28,890:eu_debug: Failed to upload file 'CRISPR-screen.tiling.CRISPRi_T0.fastq.gz' for TSTFF061492. 2020-02-25 14:20:28,892:eu_debug: Subprocess command 'aws s3 cp CRISPR-screen.tiling.CRISPRi_T0.fastq.gz s3://encoded-files-dev/2020/02/25/1c8591ca-0007-4e30-9ca8-1b7b1b83044c/TSTFF061492.fastq.gz' failed with return code '1'. Stdout is ''. Stderr is 'Traceback (most recent call last): File "/usr/local/bin/aws", line 7, in from aws.main import main File "/users/marinovg/.local/lib/python3.6/site-packages/aws/main.py", line 23 print '%(name)s: %(endpoint)s' % { ^ SyntaxError: invalid syntax '. 2020-02-25 14:26:38,573:eu_debug: Connecting to test.encodedcc.org 2020-02-25 14:26:38,574:eu_debug: submission=False: In non-submission mode. 2020-02-25 14:26:38,875:eu_debug: submission=True: In submission mode. 2020-02-25 14:26:38,887:eu_debug: IN post(). 2020-02-25 14:26:39,225:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T0", "file_format": "fastq", "file_size": 176635884, "lab": "/labs/will-greenleaf/", "md5sum": "c0d5d0b1aabfbff87a2dc2ef591f0843", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T0.fastq.gz" } 2020-02-25 14:26:39,717:eu_debug: {'detail': "Keys conflict: [('alias', 'md5:c0d5d0b1aabfbff87a2dc2ef591f0843'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz')]", 'description': 'There was a conflict when trying to complete your request.', 'title': 'Conflict', 'code': 409, 'status': 'error', '@type': ['HTTPConflict', 'Error']} 2020-02-25 14:26:39,717:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz/?format=json&datastore=database 2020-02-25 14:26:39,971:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T0.fastq.gz']'. 2020-02-25 14:26:39,972:eu_debug: IN post(). 2020-02-25 14:26:40,307:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 157765915, "lab": "/labs/will-greenleaf/", "md5sum": "122fdcdbcdfeb6c6606368f434b5ad0d", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz" } 2020-02-25 14:26:40,848:eu_debug: {'code': 409, 'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz'), ('alias', 'md5:122fdcdbcdfeb6c6606368f434b5ad0d')]", 'title': 'Conflict'} 2020-02-25 14:26:40,849:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz/?format=json&datastore=database 2020-02-25 14:26:41,196:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep1.fastq.gz']'. 2020-02-25 14:26:41,196:eu_debug: IN post(). 2020-02-25 14:26:41,523:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRa_tiling-T14", "file_format": "fastq", "file_size": 185739290, "lab": "/labs/will-greenleaf/", "md5sum": "a614d15de47f2b7eb05aea9281c0d2ae", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRa_tiling_T14-R2_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz" } 2020-02-25 14:26:42,034:eu_debug: {'code': 409, 'status': 'error', 'description': 'There was a conflict when trying to complete your request.', '@type': ['HTTPConflict', 'Error'], 'detail': "Keys conflict: [('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz'), ('alias', 'md5:a614d15de47f2b7eb05aea9281c0d2ae')]", 'title': 'Conflict'} 2020-02-25 14:26:42,035:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz/?format=json&datastore=database 2020-02-25 14:26:42,325:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRa_T14_Rep2.fastq.gz']'. 2020-02-25 14:26:42,326:eu_debug: IN post(). 2020-02-25 14:26:42,700:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRi_tiling-T0", "file_format": "fastq", "file_size": 191195503, "lab": "/labs/will-greenleaf/", "md5sum": "eabc7054ea1d767c90811bc46557d6bf", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRi_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRi_T0.fastq.gz" } 2020-02-25 14:26:43,189:eu_debug: {'status': 'error', 'title': 'Conflict', 'detail': "Keys conflict: [('alias', 'md5:eabc7054ea1d767c90811bc46557d6bf'), ('alias', 'will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz')]", '@type': ['HTTPConflict', 'Error'], 'code': 409, 'description': 'There was a conflict when trying to complete your request.'} 2020-02-25 14:26:43,189:eu_debug: >>>>>>GET will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz From DCC with URL https://test.encodedcc.org/will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz/?format=json&datastore=database 2020-02-25 14:26:43,445:eu_debug: Will not POST 'will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz' since it already exists with aliases '['will-greenleaf:CRISPR-screen.tiling.CRISPRi_T0.fastq.gz']'. 2020-02-25 14:26:43,446:eu_debug: IN post(). 2020-02-25 14:26:45,720:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRi_tiling-T14", "file_format": "fastq", "file_size": 152245698, "lab": "/labs/will-greenleaf/", "md5sum": "e5ef64d531094a4c95b877b5c5bbbad6", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRi_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz" } 2020-02-25 14:26:46,276:eu_debug: Success. 2020-02-25 14:26:46,277:eu_debug: IN upload_file() 2020-02-25 14:26:46,277:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:26:46,798:eu_debug: Success: upload credentials for 'TSTFF350680' regenerated. 2020-02-25 14:26:46,799:eu_debug: >>>>>>GET TSTFF350680 From DCC with URL https://test.encodedcc.org/TSTFF350680/?format=json&datastore=database 2020-02-25 14:26:47,098:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRi_T14_Rep1.fastq.gz s3://encoded-files-dev/2020/02/25/4e28b226-ef0a-4dca-ae3b-9b69ca8aac7c/TSTFF350680.fastq.gz'. 2020-02-25 14:26:54,759:eu_debug: AWS upload successful. 2020-02-25 14:26:54,761:eu_debug: IN post(). 2020-02-25 14:26:57,105:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRISPRi_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRISPRi_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRi_tiling-T14", "file_format": "fastq", "file_size": 153130538, "lab": "/labs/will-greenleaf/", "md5sum": "65447f83fd09d23fd657bc4454e497d7", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRi_tiling_T14-R2_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRISPRi_T14_Rep2.fastq.gz" } 2020-02-25 14:26:57,629:eu_debug: Success. 2020-02-25 14:26:57,630:eu_debug: IN upload_file() 2020-02-25 14:26:57,630:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:26:59,489:eu_debug: Success: upload credentials for 'TSTFF670458' regenerated. 2020-02-25 14:26:59,489:eu_debug: >>>>>>GET TSTFF670458 From DCC with URL https://test.encodedcc.org/TSTFF670458/?format=json&datastore=database 2020-02-25 14:26:59,794:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRISPRi_T14_Rep2.fastq.gz s3://encoded-files-dev/2020/02/25/a5942a43-7714-483c-b5ab-0092b047ceb9/TSTFF670458.fastq.gz'. 2020-02-25 14:27:05,703:eu_debug: AWS upload successful. 2020-02-25 14:27:05,705:eu_debug: IN post(). 2020-02-25 14:27:08,325:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRKO_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRKO_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRk_tiling-T0", "file_format": "fastq", "file_size": 166985272, "lab": "/labs/will-greenleaf/", "md5sum": "ab9a73fd26d67e080173471a6b14f599", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRk_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRKO_T0.fastq.gz" } 2020-02-25 14:27:08,880:eu_debug: Success. 2020-02-25 14:27:08,882:eu_debug: IN upload_file() 2020-02-25 14:27:08,882:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:27:09,368:eu_debug: Success: upload credentials for 'TSTFF263534' regenerated. 2020-02-25 14:27:09,369:eu_debug: >>>>>>GET TSTFF263534 From DCC with URL https://test.encodedcc.org/TSTFF263534/?format=json&datastore=database 2020-02-25 14:27:09,633:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRKO_T0.fastq.gz s3://encoded-files-dev/2020/02/25/d6d9ccd2-201c-463d-82ec-f41f58bda625/TSTFF263534.fastq.gz'. 2020-02-25 14:27:15,076:eu_debug: AWS upload successful. 2020-02-25 14:27:15,078:eu_debug: IN post(). 2020-02-25 14:27:17,390:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRKO_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRKO_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRk_tiling-T14", "file_format": "fastq", "file_size": 165223000, "lab": "/labs/will-greenleaf/", "md5sum": "50faf0e4906435c652a083cdad005eef", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRk_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRKO_T14_Rep1.fastq.gz" } 2020-02-25 14:27:17,900:eu_debug: Success. 2020-02-25 14:27:17,901:eu_debug: IN upload_file() 2020-02-25 14:27:17,901:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:27:18,418:eu_debug: Success: upload credentials for 'TSTFF229313' regenerated. 2020-02-25 14:27:18,418:eu_debug: >>>>>>GET TSTFF229313 From DCC with URL https://test.encodedcc.org/TSTFF229313/?format=json&datastore=database 2020-02-25 14:27:18,706:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRKO_T14_Rep1.fastq.gz s3://encoded-files-dev/2020/02/25/ec2048a2-0a6a-4578-aae6-4eac54ad6bcd/TSTFF229313.fastq.gz'. 2020-02-25 14:27:24,119:eu_debug: AWS upload successful. 2020-02-25 14:27:24,121:eu_debug: IN post(). 2020-02-25 14:27:26,446:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.CRKO_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.CRKO_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRk_tiling-T14", "file_format": "fastq", "file_size": 152799439, "lab": "/labs/will-greenleaf/", "md5sum": "77ca5b0241fc1fb9d346984323a4b0de", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRk_tiling_T14-R2_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.CRKO_T14_Rep2.fastq.gz" } 2020-02-25 14:27:27,006:eu_debug: Success. 2020-02-25 14:27:27,007:eu_debug: IN upload_file() 2020-02-25 14:27:27,007:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:27:27,506:eu_debug: Success: upload credentials for 'TSTFF638772' regenerated. 2020-02-25 14:27:27,506:eu_debug: >>>>>>GET TSTFF638772 From DCC with URL https://test.encodedcc.org/TSTFF638772/?format=json&datastore=database 2020-02-25 14:27:27,838:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.CRKO_T14_Rep2.fastq.gz s3://encoded-files-dev/2020/02/25/949c402a-e236-4c4c-b060-4276b008addf/TSTFF638772.fastq.gz'. 2020-02-25 14:27:33,661:eu_debug: AWS upload successful. 2020-02-25 14:27:33,663:eu_debug: IN post(). 2020-02-25 14:27:35,544:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.dCas9_T0.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.dCas9_T0.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRd_tiling-T0", "file_format": "fastq", "file_size": 128736984, "lab": "/labs/will-greenleaf/", "md5sum": "395f1fc2de938908cffa19128403f93a", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRd_tiling_T0-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.dCas9_T0.fastq.gz" } 2020-02-25 14:27:36,034:eu_debug: Success. 2020-02-25 14:27:36,035:eu_debug: IN upload_file() 2020-02-25 14:27:36,035:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:27:36,554:eu_debug: Success: upload credentials for 'TSTFF475796' regenerated. 2020-02-25 14:27:36,554:eu_debug: >>>>>>GET TSTFF475796 From DCC with URL https://test.encodedcc.org/TSTFF475796/?format=json&datastore=database 2020-02-25 14:27:36,845:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.dCas9_T0.fastq.gz s3://encoded-files-dev/2020/02/25/fb62b036-7ed2-487e-bb5a-9dec7b52d1e3/TSTFF475796.fastq.gz'. 2020-02-25 14:27:42,373:eu_debug: AWS upload successful. 2020-02-25 14:27:42,375:eu_debug: IN post(). 2020-02-25 14:27:45,081:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.dCas9_T14_Rep1.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.dCas9_T14_Rep1.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRd_tiling-T14", "file_format": "fastq", "file_size": 181317708, "lab": "/labs/will-greenleaf/", "md5sum": "ef28df9c2f87681943973c8c73faaad4", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRd_tiling_T14-R1_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.dCas9_T14_Rep1.fastq.gz" } 2020-02-25 14:27:45,570:eu_debug: Success. 2020-02-25 14:27:45,571:eu_debug: IN upload_file() 2020-02-25 14:27:45,571:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:27:46,075:eu_debug: Success: upload credentials for 'TSTFF390052' regenerated. 2020-02-25 14:27:46,075:eu_debug: >>>>>>GET TSTFF390052 From DCC with URL https://test.encodedcc.org/TSTFF390052/?format=json&datastore=database 2020-02-25 14:27:46,379:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.dCas9_T14_Rep1.fastq.gz s3://encoded-files-dev/2020/02/25/d03370b8-6f35-4a9e-8a11-a276ccb8a473/TSTFF390052.fastq.gz'. 2020-02-25 14:27:51,598:eu_debug: AWS upload successful. 2020-02-25 14:27:51,600:eu_debug: IN post(). 2020-02-25 14:27:53,619:eu_debug: <<<<<< POST file record will-greenleaf:CRISPR-screen.tiling.dCas9_T14_Rep2.fastq.gz To DCC with URL https://test.encodedcc.org/file and this payload: { "aliases": [ "will-greenleaf:CRISPR-screen.tiling.dCas9_T14_Rep2.fastq.gz" ], "award": "/awards/UM1HG009436/", "dataset": "will-greenleaf:K562_CRISPRd_tiling-T14", "file_format": "fastq", "file_size": 158260181, "lab": "/labs/will-greenleaf/", "md5sum": "2c1f6c2f5ebd1ebc4e9977c7e837b340", "output_type": "reads", "platform": "encode:HiSeq4000", "read_length": 21, "replicate": "will-greenleaf:K562_CRISPRd_tiling_T14-R2_T1", "run_type": "single-ended", "submitted_file_name": "CRISPR-screen.tiling.dCas9_T14_Rep2.fastq.gz" } 2020-02-25 14:27:54,139:eu_debug: Success. 2020-02-25 14:27:54,140:eu_debug: IN upload_file() 2020-02-25 14:27:54,141:eu_debug: Attempting to generate new file upload credentials 2020-02-25 14:27:54,632:eu_debug: Success: upload credentials for 'TSTFF619947' regenerated. 2020-02-25 14:27:54,633:eu_debug: >>>>>>GET TSTFF619947 From DCC with URL https://test.encodedcc.org/TSTFF619947/?format=json&datastore=database 2020-02-25 14:27:54,943:eu_debug: Running command 'aws s3 cp CRISPR-screen.tiling.dCas9_T14_Rep2.fastq.gz s3://encoded-files-dev/2020/02/25/cb550780-864d-45c8-be13-a3d72fe574ff/TSTFF619947.fastq.gz'. 2020-02-25 14:28:00,999:eu_debug: AWS upload successful.