Index of /kundaje/marinovg/oak/ENCODE4/CRISPR/2019-02-27-protein_coding_gene_design

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]2019-02-27-protein_coding_gene_design.pdf2019-03-17 11:20 640K 
[ ]2019-02-27-protein_coding_gene_design.pptx2019-03-17 11:20 245K 
[TXT]2019-03-26-clinvar-lists.csv2019-03-26 20:08 324K 
[ ]2019-03-26-clinvar-lists.geq10mutations-vs-CRISPRi_combo.p_leq_0.052019-03-26 20:32 191  
[ ]2019-03-26-clinvar-lists.geq10mutations-vs-CRISPRi_combo.p_leq_0.05.top102019-03-27 10:01 271  
[TXT]2019-03-26-clinvar-lists.geq10mutations-vs-CRISPRi_combo.p_leq_0.05.top10.CRISPRi_combo.p_leq_0.05.tsv2019-03-27 10:02 1.1K 
[ ]2019-03-26-clinvar-lists.geq10mutations-vs-CRISPRi_combo.p_leq_0.05.top10.guide_per_gene.minCFD_0.2.2bp_radius2019-03-27 12:27 409  
[ ]2019-03-26-clinvar-lists.geq10mutations-vs-CRISPRi_combo.p_leq_0.05.top10.guide_per_gene.minCFD_0.2bp_radius2019-03-27 11:52 410  
[TXT]2019-03-26-clinvar-lists.geq10mutations-vs-CRISPRi_combo.p_leq_0.05.top10.guides.offset-11.CFD0.2.csv2019-03-27 12:36 775K 
[TXT]2019-03-26-clinvar-lists.geq10mutations-vs-CRISPRi_combo.p_leq_0.05.top10.guides.offset-11.csv2019-03-27 10:14 1.2M 
[ ]2019-03-26-clinvar-lists.geq10mutations-vs-CRISPRi_combo.p_leq_0.05.top10.guides.offset-11.guides.bed2019-03-27 10:57 333K 
[TXT]2019-03-26-clinvar-lists.geq10mutations-vs-CRISPRi_combo.p_leq_0.05.tsv2019-03-27 09:59 721  
[ ]2019-03-26-clinvar-lists.geq10mutations-vs-ricin_CRISPRko_genes.2fold.FDR_0.12019-03-26 20:26 80  
[ ]2019-03-26-clinvar-lists.geq10mutations-vs-ricin_CRISPRko_genes.2fold.FDR_0.1.top102019-03-27 10:05 269  
[ ]2019-03-26-clinvar-lists.geq10mutations-vs-ricin_CRISPRko_genes.2fold.FDR_0.1.top10.guide_per_gene.minCFD_0.2.2bp_radius2019-03-27 12:27 412  
[ ]2019-03-26-clinvar-lists.geq10mutations-vs-ricin_CRISPRko_genes.2fold.FDR_0.1.top10.guide_per_gene.minCFD_0.2bp_radius2019-03-27 11:52 414  
[TXT]2019-03-26-clinvar-lists.geq10mutations-vs-ricin_CRISPRko_genes.2fold.FDR_0.1.top10.guides.offset-11.CFD0.2.csv2019-03-27 12:36 600K 
[TXT]2019-03-26-clinvar-lists.geq10mutations-vs-ricin_CRISPRko_genes.2fold.FDR_0.1.top10.guides.offset-11.csv2019-03-27 10:14 1.0M 
[TXT]2019-03-26-clinvar-lists.geq10mutations-vs-ricin_CRISPRko_genes.2fold.FDR_0.1.top10.ricin_CRISPRko_genes.2fold.FDR_0.1.tsv2019-03-27 10:10 545  
[TXT]2019-03-26-clinvar-lists.geq10mutations-vs-ricin_CRISPRko_genes.2fold.FDR_0.1.tsv2019-03-27 09:59 344  
[TXT]2019-03-26-clinvar-lists.geq10mutations.tsv2019-03-26 20:25 8.9K 
[ ]2019-03-26-clinvar-lists.geq30mutations-vs-CRISPRi_combo.p_leq_0.052019-03-26 20:37 33  
[ ]2019-03-26-clinvar-lists.geq30mutations-vs-ricin_CRISPRko_genes.2fold.FDR_0.12019-03-26 20:37 23  
[TXT]2019-03-26-clinvar-lists.geq30mutations.tsv2019-03-26 20:36 2.2K 
[TXT]2019-03-26-clinvar-lists.tsv2019-03-26 20:24 306K 
[ ]2019-03-27-protein_coding_gene_design.pdf2019-03-27 12:30 1.0M 
[ ]2019-03-27-protein_coding_gene_design.pptx2019-03-27 12:30 765K 
[TXT]CRISPRi_combo.p_leq_0.05.tsv2019-03-26 20:31 169K 
[ ]gencode.v29.annotation.20bp_ext.bed.gz2019-02-27 15:00 8.1M 
[ ]gencode.v29.annotation.20bp_ext.lincRNA.bed.gz2019-02-27 15:03 486K 
[ ]gencode.v29.annotation.20bp_ext.lincRNA.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:53 257K 
[ ]gencode.v29.annotation.20bp_ext.lincRNA.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:48 258K 
[ ]gencode.v29.annotation.20bp_ext.lincRNA.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:53 256K 
[ ]gencode.v29.annotation.20bp_ext.lincRNA.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:48 249K 
[ ]gencode.v29.annotation.20bp_ext.lincRNA.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:53 232K 
[ ]gencode.v29.annotation.20bp_ext.macro_lncRNA.bed.gz2019-02-27 15:03 135  
[ ]gencode.v29.annotation.20bp_ext.miRNA.bed.gz2019-02-27 15:03 41K 
[ ]gencode.v29.annotation.20bp_ext.miRNA.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:43 53K 
[ ]gencode.v29.annotation.20bp_ext.miRNA.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:42 54K 
[ ]gencode.v29.annotation.20bp_ext.miRNA.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:46 50K 
[ ]gencode.v29.annotation.20bp_ext.miRNA.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:46 45K 
[ ]gencode.v29.annotation.20bp_ext.miRNA.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:48 41K 
[ ]gencode.v29.annotation.20bp_ext.misc_RNA.bed.gz2019-02-27 15:03 48K 
[ ]gencode.v29.annotation.20bp_ext.misc_RNA.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:43 38K 
[ ]gencode.v29.annotation.20bp_ext.misc_RNA.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:42 38K 
[ ]gencode.v29.annotation.20bp_ext.misc_RNA.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:45 36K 
[ ]gencode.v29.annotation.20bp_ext.misc_RNA.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:47 32K 
[ ]gencode.v29.annotation.20bp_ext.misc_RNA.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:47 29K 
[ ]gencode.v29.annotation.20bp_ext.protein_coding.bed.gz2019-02-27 15:03 6.1M 
[ ]gencode.v29.annotation.20bp_ext.protein_coding.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 11:21 634K 
[ ]gencode.v29.annotation.20bp_ext.protein_coding.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 11:21 638K 
[ ]gencode.v29.annotation.20bp_ext.protein_coding.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 11:21 636K 
[ ]gencode.v29.annotation.20bp_ext.protein_coding.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 11:21 632K 
[ ]gencode.v29.annotation.20bp_ext.protein_coding.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 11:21 626K 
[ ]gencode.v29.annotation.20bp_ext.pseudogene.bed.gz2019-02-27 15:03 700  
[ ]gencode.v29.annotation.20bp_ext.pseudogene.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:43 550  
[ ]gencode.v29.annotation.20bp_ext.pseudogene.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:42 583  
[ ]gencode.v29.annotation.20bp_ext.pseudogene.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:45 503  
[ ]gencode.v29.annotation.20bp_ext.pseudogene.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:45 502  
[ ]gencode.v29.annotation.20bp_ext.pseudogene.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:46 503  
[ ]gencode.v29.annotation.20bp_ext.ribozyme.bed.gz2019-02-27 15:03 302  
[ ]gencode.v29.annotation.20bp_ext.ribozyme.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:43 326  
[ ]gencode.v29.annotation.20bp_ext.ribozyme.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:42 327  
[ ]gencode.v29.annotation.20bp_ext.ribozyme.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:45 327  
[ ]gencode.v29.annotation.20bp_ext.ribozyme.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:45 303  
[ ]gencode.v29.annotation.20bp_ext.ribozyme.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:46 289  
[ ]gencode.v29.annotation.20bp_ext.sRNA.bed.gz2019-02-27 15:03 217  
[ ]gencode.v29.annotation.20bp_ext.sRNA.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:44 128  
[ ]gencode.v29.annotation.20bp_ext.sRNA.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:42 138  
[ ]gencode.v29.annotation.20bp_ext.sRNA.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:45 127  
[ ]gencode.v29.annotation.20bp_ext.sRNA.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:46 128  
[ ]gencode.v29.annotation.20bp_ext.sRNA.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:47 116  
[ ]gencode.v29.annotation.20bp_ext.scRNA.bed.gz2019-02-27 15:03 122  
[ ]gencode.v29.annotation.20bp_ext.scRNA.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:43 107  
[ ]gencode.v29.annotation.20bp_ext.scRNA.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:42 107  
[ ]gencode.v29.annotation.20bp_ext.scRNA.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:45 107  
[ ]gencode.v29.annotation.20bp_ext.scRNA.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:45 95  
[ ]gencode.v29.annotation.20bp_ext.scRNA.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:46 95  
[ ]gencode.v29.annotation.20bp_ext.scaRNA.bed.gz2019-02-27 15:03 1.1K 
[ ]gencode.v29.annotation.20bp_ext.scaRNA.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:43 1.0K 
[ ]gencode.v29.annotation.20bp_ext.scaRNA.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:42 1.0K 
[ ]gencode.v29.annotation.20bp_ext.scaRNA.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:45 1.0K 
[ ]gencode.v29.annotation.20bp_ext.scaRNA.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:45 957  
[ ]gencode.v29.annotation.20bp_ext.scaRNA.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:46 837  
[ ]gencode.v29.annotation.20bp_ext.snRNA.bed.gz2019-02-27 15:03 41K 
[ ]gencode.v29.annotation.20bp_ext.snRNA.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:44 53K 
[ ]gencode.v29.annotation.20bp_ext.snRNA.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:42 57K 
[ ]gencode.v29.annotation.20bp_ext.snRNA.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:47 47K 
[ ]gencode.v29.annotation.20bp_ext.snRNA.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:47 43K 
[ ]gencode.v29.annotation.20bp_ext.snRNA.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:48 41K 
[ ]gencode.v29.annotation.20bp_ext.snoRNA.bed.gz2019-02-27 15:03 21K 
[ ]gencode.v29.annotation.20bp_ext.snoRNA.guide_per_gene.minCFD_0.2.2bp_radius.offset11bp2019-03-27 10:44 17K 
[ ]gencode.v29.annotation.20bp_ext.snoRNA.guide_per_gene.minCFD_0.2bp_radius.offset11bp2019-03-27 10:42 17K 
[ ]gencode.v29.annotation.20bp_ext.snoRNA.guide_per_gene.minCFD_0.4.2bp_radius.offset11bp2019-03-27 10:45 15K 
[ ]gencode.v29.annotation.20bp_ext.snoRNA.guide_per_gene.minCFD_0.6.2bp_radius.offset11bp2019-03-27 10:46 14K 
[ ]gencode.v29.annotation.20bp_ext.snoRNA.guide_per_gene.minCFD_0.8.2bp_radius.offset11bp2019-03-27 10:47 12K 
[ ]gencode.v29.annotation.20bp_ext.vaultRNA.bed.gz2019-02-27 15:03 130  
[ ]lincRNA-exons.tar.gz2019-03-17 08:51 706K 
[ ]lincRNA-guides.files2019-03-17 09:09 664K 
[ ]lincRNA-guides.tar.gz2025-04-06 22:11 23M 
[ ]miRNA-exons.tar.gz2019-03-17 08:49 81K 
[ ]miRNA-guides.files2019-03-17 09:08 151K 
[ ]miRNA-guides.tar.gz2025-04-06 22:11 658K 
[ ]misc_RNA-exons.tar.gz2019-03-17 08:49 74K 
[ ]misc_RNA-guides.files2019-03-17 09:08 105K 
[ ]misc_RNA-guides.tar.gz2025-04-06 22:11 716K 
[TXT]pick_guides-offset-11.sh2019-02-27 17:26 11M 
[ ]protein_coding-exons.tar.gz2019-03-17 08:59 6.7M 
[ ]protein_coding-guides.files2019-03-17 09:08 1.7M 
[ ]protein_coding-guides.tar.gz2025-04-06 22:22 270M 
[ ]pseudogene-exons.tar.gz2019-03-17 08:50 1.2K 
[ ]pseudogene-guides.files2019-03-17 09:07 1.6K 
[ ]pseudogene-guides.tar.gz2025-04-06 22:11 3.1K 
[ ]ribozyme-exons.tar.gz2019-03-17 08:50 591  
[ ]ribozyme-guides.files2019-03-17 09:07 672  
[ ]ribozyme-guides.tar.gz2025-04-06 22:11 7.4K 
[ ]ricin_CRISPRko_genes.2fold.FDR_0.1.bed2019-03-26 20:23 27K 
[ ]ricin_CRISPRko_genes.bed2018-07-10 18:06 1.1M 
[ ]sRNA-exons.tar.gz2019-03-17 08:50 380  
[ ]sRNA-guides.files2019-03-17 09:06 162  
[ ]sRNA-guides.tar.gz2025-04-06 22:11 1.1K 
[ ]scRNA-exons.tar.gz2019-03-17 08:50 260  
[ ]scRNA-guides.files2019-03-17 09:06 80  
[ ]scRNA-guides.tar.gz2025-04-06 22:11 666  
[ ]scaRNA-exons.tar.gz2019-03-17 08:50 1.9K 
[ ]scaRNA-guides.files2019-03-17 09:07 2.4K 
[ ]scaRNA-guides.tar.gz2025-04-06 22:11 24K 
[ ]snRNA-exons.tar.gz2019-03-17 08:50 79K 
[ ]snRNA-guides.files2019-03-17 09:06 153K 
[ ]snRNA-guides.tar.gz2025-04-06 22:11 338K 
[ ]snoRNA-exons.tar.gz2019-03-17 08:50 32K 
[ ]snoRNA-guides.files2019-03-17 09:06 45K 
[ ]snoRNA-guides.tar.gz2025-04-06 22:11 257K 
[ ]top200-ricin-genes2019-03-17 11:14 1.2K 
[ ]top200-ricin-genes.minCFD_0.2.2bp_radius.offset11bp2019-03-27 11:21 6.2K 
[ ]z2019-03-27 10:41 14K 
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