## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L4175-K562_4p_FA.2x36mers.hg38-male.unique.bam] OUTPUT=L4175-K562_4p_FA.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L4175-K562_4p_FA.2x36mers.hg38-male.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Sep 15 18:47:08 PDT 2025

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	106720	7477626	0	4935	1237	0.046243	1469045

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.011306
2.0	1.95175
3.0	2.826298
4.0	3.639566
5.0	4.395848
6.0	5.099138
7.0	5.753148
8.0	6.361332
9.0	6.9269
10.0	7.452839
11.0	7.941926
12.0	8.396743
13.0	8.81969
14.0	9.213002
15.0	9.578754
16.0	9.918878
17.0	10.23517
18.0	10.529299
19.0	10.802818
20.0	11.057172
21.0	11.293704
22.0	11.513662
23.0	11.718207
24.0	11.90842
25.0	12.085305
26.0	12.249795
27.0	12.40276
28.0	12.545006
29.0	12.677285
30.0	12.800296
31.0	12.914687
32.0	13.021062
33.0	13.119984
34.0	13.211975
35.0	13.29752
36.0	13.37707
37.0	13.451047
38.0	13.51984
39.0	13.583813
40.0	13.643303
41.0	13.698624
42.0	13.75007
43.0	13.79791
44.0	13.842398
45.0	13.88377
46.0	13.922242
47.0	13.958018
48.0	13.991288
49.0	14.022226
50.0	14.050997
51.0	14.077751
52.0	14.102631
53.0	14.125768
54.0	14.147283
55.0	14.167291
56.0	14.185897
57.0	14.203199
58.0	14.219289
59.0	14.234251
60.0	14.248165
61.0	14.261104
62.0	14.273137
63.0	14.284326
64.0	14.294731
65.0	14.304407
66.0	14.313405
67.0	14.321773
68.0	14.329554
69.0	14.336791
70.0	14.34352
71.0	14.349777
72.0	14.355596
73.0	14.361008
74.0	14.36604
75.0	14.370719
76.0	14.375071
77.0	14.379118
78.0	14.382881
79.0	14.38638
80.0	14.389635
81.0	14.392661
82.0	14.395475
83.0	14.398092
84.0	14.400526
85.0	14.402789
86.0	14.404894
87.0	14.406851
88.0	14.408671
89.0	14.410363
90.0	14.411937
91.0	14.4134
92.0	14.414761
93.0	14.416027
94.0	14.417204
95.0	14.418299
96.0	14.419316
97.0	14.420263
98.0	14.421143
99.0	14.421962
100.0	14.422723