## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L4170-K562_2p_FA.2x36mers.hg38-male.unique.bam] OUTPUT=L4170-K562_2p_FA.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L4170-K562_2p_FA.2x36mers.hg38-male.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Sep 15 18:45:10 PDT 2025

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	544951	8251214	0	46424	7550	0.085189	3533181

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.012994
2.0	1.881198
3.0	2.625309
4.0	3.263062
5.0	3.80966
6.0	4.278131
7.0	4.679643
8.0	5.023766
9.0	5.318702
10.0	5.571483
11.0	5.788134
12.0	5.973818
13.0	6.132962
14.0	6.269359
15.0	6.38626
16.0	6.486453
17.0	6.572325
18.0	6.645923
19.0	6.709001
20.0	6.763064
21.0	6.809399
22.0	6.849112
23.0	6.883148
24.0	6.912319
25.0	6.937321
26.0	6.95875
27.0	6.977115
28.0	6.992856
29.0	7.006346
30.0	7.017909
31.0	7.027819
32.0	7.036312
33.0	7.043591
34.0	7.04983
35.0	7.055177
36.0	7.05976
37.0	7.063688
38.0	7.067055
39.0	7.06994
40.0	7.072413
41.0	7.074532
42.0	7.076349
43.0	7.077906
44.0	7.07924
45.0	7.080384
46.0	7.081364
47.0	7.082204
48.0	7.082924
49.0	7.083541
50.0	7.08407
51.0	7.084523
52.0	7.084911
53.0	7.085244
54.0	7.08553
55.0	7.085774
56.0	7.085984
57.0	7.086164
58.0	7.086318
59.0	7.08645
60.0	7.086563
61.0	7.08666
62.0	7.086743
63.0	7.086814
64.0	7.086875
65.0	7.086927
66.0	7.086972
67.0	7.087011
68.0	7.087044
69.0	7.087072
70.0	7.087096
71.0	7.087117
72.0	7.087134
73.0	7.08715
74.0	7.087163
75.0	7.087174
76.0	7.087184
77.0	7.087192
78.0	7.087199
79.0	7.087205
80.0	7.08721
81.0	7.087214
82.0	7.087218
83.0	7.087221
84.0	7.087224
85.0	7.087227
86.0	7.087229
87.0	7.08723
88.0	7.087232
89.0	7.087233
90.0	7.087234
91.0	7.087235
92.0	7.087236
93.0	7.087237
94.0	7.087237
95.0	7.087238
96.0	7.087238
97.0	7.087239
98.0	7.087239
99.0	7.087239
100.0	7.08724