## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L4161-K562_0.2p_FA.2x36mers.hg38-male.unique.bam] OUTPUT=L4161-K562_0.2p_FA.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L4161-K562_0.2p_FA.2x36mers.hg38-male.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Sep 15 18:47:08 PDT 2025

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	7086508	6815966	0	339400	85018	0.047894	94004608

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.011691
2.0	1.94992
3.0	2.82002
4.0	3.62694
5.0	4.375267
6.0	5.069255
7.0	5.712851
8.0	6.309713
9.0	6.863234
10.0	7.376563
11.0	7.852617
12.0	8.294103
13.0	8.703532
14.0	9.08323
15.0	9.435358
16.0	9.761916
17.0	10.064761
18.0	10.345616
19.0	10.606078
20.0	10.847626
21.0	11.071635
22.0	11.279377
23.0	11.472035
24.0	11.650703
25.0	11.816398
26.0	11.970061
27.0	12.112566
28.0	12.244723
29.0	12.367284
30.0	12.480945
31.0	12.586353
32.0	12.684107
33.0	12.774762
34.0	12.858835
35.0	12.936803
36.0	13.00911
37.0	13.076166
38.0	13.138353
39.0	13.196024
40.0	13.249508
41.0	13.299108
42.0	13.345106
43.0	13.387764
44.0	13.427325
45.0	13.464013
46.0	13.498037
47.0	13.529591
48.0	13.558853
49.0	13.58599
50.0	13.611157
51.0	13.634497
52.0	13.656141
53.0	13.676214
54.0	13.69483
55.0	13.712093
56.0	13.728104
57.0	13.742951
58.0	13.756721
59.0	13.76949
60.0	13.781333
61.0	13.792315
62.0	13.8025
63.0	13.811945
64.0	13.820705
65.0	13.828828
66.0	13.836362
67.0	13.843348
68.0	13.849828
69.0	13.855837
70.0	13.861409
71.0	13.866577
72.0	13.871369
73.0	13.875814
74.0	13.879936
75.0	13.883758
76.0	13.887303
77.0	13.890591
78.0	13.89364
79.0	13.896467
80.0	13.899089
81.0	13.901521
82.0	13.903776
83.0	13.905867
84.0	13.907807
85.0	13.909606
86.0	13.911274
87.0	13.912821
88.0	13.914255
89.0	13.915586
90.0	13.91682
91.0	13.917964
92.0	13.919025
93.0	13.920009
94.0	13.920922
95.0	13.921768
96.0	13.922553
97.0	13.923281
98.0	13.923956
99.0	13.924582
100.0	13.925163