## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L4157-K562_0.1p_FA.2x36mers.hg38-male.unique.bam] OUTPUT=L4157-K562_0.1p_FA.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L4157-K562_0.1p_FA.2x36mers.hg38-male.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Sep 15 18:45:09 PDT 2025

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	9293019	8487528	0	467909	122101	0.050351	118530983

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.012799
2.0	1.949226
3.0	2.815039
4.0	3.615565
5.0	4.355725
6.0	5.040072
7.0	5.672814
8.0	6.257843
9.0	6.798757
10.0	7.298883
11.0	7.761295
12.0	8.188838
13.0	8.584142
14.0	8.949636
15.0	9.28757
16.0	9.600022
17.0	9.888912
18.0	10.156018
19.0	10.402983
20.0	10.631324
21.0	10.842447
22.0	11.03765
23.0	11.218133
24.0	11.385007
25.0	11.539297
26.0	11.681952
27.0	11.813851
28.0	11.935803
29.0	12.048559
30.0	12.152813
31.0	12.249205
32.0	12.338329
33.0	12.420732
34.0	12.496921
35.0	12.567365
36.0	12.632497
37.0	12.692718
38.0	12.748397
39.0	12.799878
40.0	12.847477
41.0	12.891487
42.0	12.932178
43.0	12.9698
44.0	13.004586
45.0	13.036748
46.0	13.066486
47.0	13.093981
48.0	13.119402
49.0	13.142907
50.0	13.164639
51.0	13.184732
52.0	13.203311
53.0	13.220488
54.0	13.23637
55.0	13.251054
56.0	13.264631
57.0	13.277185
58.0	13.288791
59.0	13.299523
60.0	13.309445
61.0	13.318619
62.0	13.327101
63.0	13.334944
64.0	13.342195
65.0	13.3489
66.0	13.355099
67.0	13.36083
68.0	13.366129
69.0	13.371029
70.0	13.375559
71.0	13.379748
72.0	13.38362
73.0	13.387201
74.0	13.390512
75.0	13.393573
76.0	13.396403
77.0	13.39902
78.0	13.401439
79.0	13.403676
80.0	13.405745
81.0	13.407657
82.0	13.409425
83.0	13.41106
84.0	13.412572
85.0	13.413969
86.0	13.415261
87.0	13.416456
88.0	13.417561
89.0	13.418582
90.0	13.419527
91.0	13.4204
92.0	13.421207
93.0	13.421953
94.0	13.422644
95.0	13.423282
96.0	13.423872
97.0	13.424417
98.0	13.424921
99.0	13.425388
100.0	13.425819