## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L4156-K562_0.1p_FA.2x36mers.hg38-male.unique.bam] OUTPUT=L4156-K562_0.1p_FA.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L4156-K562_0.1p_FA.2x36mers.hg38-male.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Sep 15 18:45:09 PDT 2025

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	10938682	10381158	0	591566	148224	0.05408	127691951

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.013157
2.0	1.943135
3.0	2.796765
4.0	3.580313
5.0	4.299533
6.0	4.959707
7.0	5.565682
8.0	6.121907
9.0	6.632468
10.0	7.101112
11.0	7.531282
12.0	7.926136
13.0	8.288573
14.0	8.621255
15.0	8.926624
16.0	9.206923
17.0	9.46421
18.0	9.700374
19.0	9.91715
20.0	10.116129
21.0	10.298772
22.0	10.46642
23.0	10.620305
24.0	10.761556
25.0	10.891211
26.0	11.010221
27.0	11.119461
28.0	11.219733
29.0	11.311772
30.0	11.396255
31.0	11.473803
32.0	11.544983
33.0	11.61032
34.0	11.670293
35.0	11.725343
36.0	11.775873
37.0	11.822254
38.0	11.864828
39.0	11.903906
40.0	11.939776
41.0	11.972702
42.0	12.002924
43.0	12.030665
44.0	12.056128
45.0	12.079501
46.0	12.100956
47.0	12.120648
48.0	12.138725
49.0	12.155317
50.0	12.170546
51.0	12.184526
52.0	12.197358
53.0	12.209136
54.0	12.219948
55.0	12.229871
56.0	12.238981
57.0	12.247342
58.0	12.255017
59.0	12.262061
60.0	12.268528
61.0	12.274463
62.0	12.279911
63.0	12.284912
64.0	12.289503
65.0	12.293716
66.0	12.297584
67.0	12.301134
68.0	12.304392
69.0	12.307383
70.0	12.310129
71.0	12.312649
72.0	12.314962
73.0	12.317086
74.0	12.319035
75.0	12.320824
76.0	12.322466
77.0	12.323973
78.0	12.325356
79.0	12.326626
80.0	12.327792
81.0	12.328862
82.0	12.329844
83.0	12.330746
84.0	12.331573
85.0	12.332333
86.0	12.33303
87.0	12.33367
88.0	12.334257
89.0	12.334797
90.0	12.335292
91.0	12.335746
92.0	12.336163
93.0	12.336546
94.0	12.336897
95.0	12.33722
96.0	12.337516
97.0	12.337787
98.0	12.338037
99.0	12.338266
100.0	12.338476