## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L4153-K562_native.2x36mers.hg38-male.unique.bam] OUTPUT=L4153-K562_native.2x36mers.hg38-male.unique.dedup.bam METRICS_FILE=L4153-K562_native.2x36mers.hg38-male.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Sep 15 18:45:09 PDT 2025

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	20335569	33211908	0	899815	284012	0.044248	319737177

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.013719
2.0	1.964971
3.0	2.857607
4.0	3.695238
5.0	4.481254
6.0	5.218835
7.0	5.910966
8.0	6.560448
9.0	7.169908
10.0	7.741812
11.0	8.278476
12.0	8.78207
13.0	9.254633
14.0	9.698076
15.0	10.114193
16.0	10.50467
17.0	10.871084
18.0	11.214921
19.0	11.537569
20.0	11.840336
21.0	12.124447
22.0	12.39105
23.0	12.641225
24.0	12.875984
25.0	13.096278
26.0	13.302996
27.0	13.496977
28.0	13.679004
29.0	13.849814
30.0	14.0101
31.0	14.160508
32.0	14.301648
33.0	14.434091
34.0	14.558373
35.0	14.674996
36.0	14.784433
37.0	14.887127
38.0	14.983492
39.0	15.07392
40.0	15.158775
41.0	15.238401
42.0	15.313121
43.0	15.383236
44.0	15.449031
45.0	15.510772
46.0	15.568708
47.0	15.623074
48.0	15.67409
49.0	15.721962
50.0	15.766885
51.0	15.809039
52.0	15.848595
53.0	15.885715
54.0	15.920547
55.0	15.953232
56.0	15.983904
57.0	16.012685
58.0	16.039693
59.0	16.065037
60.0	16.088819
61.0	16.111135
62.0	16.132076
63.0	16.151727
64.0	16.170167
65.0	16.187471
66.0	16.203709
67.0	16.218946
68.0	16.233244
69.0	16.246661
70.0	16.259251
71.0	16.271065
72.0	16.282152
73.0	16.292555
74.0	16.302317
75.0	16.311478
76.0	16.320074
77.0	16.32814
78.0	16.33571
79.0	16.342812
80.0	16.349478
81.0	16.355732
82.0	16.361601
83.0	16.367109
84.0	16.372277
85.0	16.377127
86.0	16.381677
87.0	16.385948
88.0	16.389955
89.0	16.393715
90.0	16.397244
91.0	16.400555
92.0	16.403662
93.0	16.406578
94.0	16.409314
95.0	16.411881
96.0	16.414291
97.0	16.416551
98.0	16.418673
99.0	16.420664
100.0	16.422532