## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[OMP-GFP_ATAC_rep3-GSM7679977.2x36mers.mm10.unique.nochrM.bam] OUTPUT=OMP-GFP_ATAC_rep3-GSM7679977.2x36mers.mm10.unique.nochrM.dedup.bam METRICS_FILE=OMP-GFP_ATAC_rep3-GSM7679977.2x36mers.mm10.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Dec 07 17:27:20 PST 2023

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	11045770	0	0	1345594	0	0.12182	41574527

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.76668
3.0	2.354478
4.0	2.805131
5.0	3.150637
6.0	3.41553
7.0	3.618618
8.0	3.774321
9.0	3.893696
10.0	3.985218
11.0	4.055386
12.0	4.109183
13.0	4.150428
14.0	4.182049
15.0	4.206293
16.0	4.22488
17.0	4.23913
18.0	4.250055
19.0	4.258432
20.0	4.264854
21.0	4.269777
22.0	4.273552
23.0	4.276446
24.0	4.278665
25.0	4.280366
26.0	4.28167
27.0	4.28267
28.0	4.283437
29.0	4.284025
30.0	4.284475
31.0	4.284821
32.0	4.285086
33.0	4.285289
34.0	4.285444
35.0	4.285564
36.0	4.285655
37.0	4.285725
38.0	4.285779
39.0	4.28582
40.0	4.285852
41.0	4.285876
42.0	4.285895
43.0	4.285909
44.0	4.28592
45.0	4.285928
46.0	4.285935
47.0	4.28594
48.0	4.285944
49.0	4.285946
50.0	4.285949
51.0	4.28595
52.0	4.285952
53.0	4.285953
54.0	4.285953
55.0	4.285954
56.0	4.285954
57.0	4.285955
58.0	4.285955
59.0	4.285955
60.0	4.285955
61.0	4.285956
62.0	4.285956
63.0	4.285956
64.0	4.285956
65.0	4.285956
66.0	4.285956
67.0	4.285956
68.0	4.285956
69.0	4.285956
70.0	4.285956
71.0	4.285956
72.0	4.285956
73.0	4.285956
74.0	4.285956
75.0	4.285956
76.0	4.285956
77.0	4.285956
78.0	4.285956
79.0	4.285956
80.0	4.285956
81.0	4.285956
82.0	4.285956
83.0	4.285956
84.0	4.285956
85.0	4.285956
86.0	4.285956
87.0	4.285956
88.0	4.285956
89.0	4.285956
90.0	4.285956
91.0	4.285956
92.0	4.285956
93.0	4.285956
94.0	4.285956
95.0	4.285956
96.0	4.285956
97.0	4.285956
98.0	4.285956
99.0	4.285956
100.0	4.285956