## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[stim_BAF170_S586A_2.2x36mers.hg38+mm10.unique.nochrM.bam] OUTPUT=stim_BAF170_S586A_2.2x36mers.hg38+mm10.unique.nochrM.dedup.bam METRICS_FILE=stim_BAF170_S586A_2.2x36mers.hg38+mm10.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu May 27 19:43:31 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1526182	0	0	198110	22159	0.129808	5916389

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.012916
2.0	1.795522
3.0	2.400185
4.0	2.867364
5.0	3.22832
6.0	3.507204
7.0	3.722677
8.0	3.889158
9.0	4.017785
10.0	4.117167
11.0	4.193951
12.0	4.253277
13.0	4.299114
14.0	4.334529
15.0	4.361891
16.0	4.383032
17.0	4.399366
18.0	4.411986
19.0	4.421737
20.0	4.429271
21.0	4.435092
22.0	4.439589
23.0	4.443063
24.0	4.445748
25.0	4.447822
26.0	4.449425
27.0	4.450663
28.0	4.45162
29.0	4.452359
30.0	4.45293
31.0	4.453371
32.0	4.453712
33.0	4.453976
34.0	4.454179
35.0	4.454336
36.0	4.454458
37.0	4.454552
38.0	4.454624
39.0	4.45468
40.0	4.454724
41.0	4.454757
42.0	4.454783
43.0	4.454803
44.0	4.454818
45.0	4.45483
46.0	4.454839
47.0	4.454846
48.0	4.454852
49.0	4.454856
50.0	4.45486
51.0	4.454862
52.0	4.454864
53.0	4.454866
54.0	4.454867
55.0	4.454868
56.0	4.454868
57.0	4.454869
58.0	4.454869
59.0	4.45487
60.0	4.45487
61.0	4.45487
62.0	4.45487
63.0	4.45487
64.0	4.45487
65.0	4.45487
66.0	4.45487
67.0	4.454871
68.0	4.454871
69.0	4.454871
70.0	4.454871
71.0	4.454871
72.0	4.454871
73.0	4.454871
74.0	4.454871
75.0	4.454871
76.0	4.454871
77.0	4.454871
78.0	4.454871
79.0	4.454871
80.0	4.454871
81.0	4.454871
82.0	4.454871
83.0	4.454871
84.0	4.454871
85.0	4.454871
86.0	4.454871
87.0	4.454871
88.0	4.454871
89.0	4.454871
90.0	4.454871
91.0	4.454871
92.0	4.454871
93.0	4.454871
94.0	4.454871
95.0	4.454871
96.0	4.454871
97.0	4.454871
98.0	4.454871
99.0	4.454871
100.0	4.454871