## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[BAF170_S586E_1.2x36mers.hg38+mm10.unique.nochrM.bam] OUTPUT=BAF170_S586E_1.2x36mers.hg38+mm10.unique.nochrM.dedup.bam METRICS_FILE=BAF170_S586E_1.2x36mers.hg38+mm10.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu May 27 19:43:32 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	898413	0	0	86703	11492	0.096507	4929461

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.011813
2.0	1.855047
3.0	2.55779
4.0	3.143449
5.0	3.631531
6.0	4.038293
7.0	4.377285
8.0	4.659798
9.0	4.895241
10.0	5.091456
11.0	5.25498
12.0	5.39126
13.0	5.504834
14.0	5.599485
15.0	5.678366
16.0	5.744105
17.0	5.798891
18.0	5.84455
19.0	5.882601
20.0	5.914312
21.0	5.94074
22.0	5.962765
23.0	5.98112
24.0	5.996417
25.0	6.009166
26.0	6.01979
27.0	6.028644
28.0	6.036023
29.0	6.042173
30.0	6.047298
31.0	6.051569
32.0	6.055129
33.0	6.058095
34.0	6.060567
35.0	6.062628
36.0	6.064345
37.0	6.065776
38.0	6.066968
39.0	6.067962
40.0	6.068791
41.0	6.069481
42.0	6.070056
43.0	6.070536
44.0	6.070935
45.0	6.071268
46.0	6.071546
47.0	6.071777
48.0	6.07197
49.0	6.07213
50.0	6.072264
51.0	6.072376
52.0	6.072469
53.0	6.072546
54.0	6.072611
55.0	6.072664
56.0	6.072709
57.0	6.072747
58.0	6.072778
59.0	6.072804
60.0	6.072825
61.0	6.072843
62.0	6.072859
63.0	6.072871
64.0	6.072881
65.0	6.07289
66.0	6.072897
67.0	6.072903
68.0	6.072909
69.0	6.072913
70.0	6.072916
71.0	6.072919
72.0	6.072922
73.0	6.072924
74.0	6.072925
75.0	6.072927
76.0	6.072928
77.0	6.072929
78.0	6.07293
79.0	6.07293
80.0	6.072931
81.0	6.072931
82.0	6.072932
83.0	6.072932
84.0	6.072932
85.0	6.072933
86.0	6.072933
87.0	6.072933
88.0	6.072933
89.0	6.072933
90.0	6.072933
91.0	6.072933
92.0	6.072933
93.0	6.072933
94.0	6.072933
95.0	6.072933
96.0	6.072934
97.0	6.072934
98.0	6.072934
99.0	6.072934
100.0	6.072934