## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[SL6.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=SL6.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=SL6.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Apr 14 01:38:54 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	12464581	0	0	845654	135628	0.067845	102890147

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010348
2.0	1.905421
3.0	2.698372
4.0	3.400852
5.0	4.023182
6.0	4.574509
7.0	5.062933
8.0	5.49563
9.0	5.878959
10.0	6.218552
11.0	6.5194
12.0	6.785923
13.0	7.022037
14.0	7.231212
15.0	7.416521
16.0	7.580688
17.0	7.726124
18.0	7.854967
19.0	7.969109
20.0	8.070229
21.0	8.159811
22.0	8.239173
23.0	8.30948
24.0	8.371765
25.0	8.426944
26.0	8.475827
27.0	8.519133
28.0	8.557499
29.0	8.591486
30.0	8.621596
31.0	8.648271
32.0	8.671902
33.0	8.692837
34.0	8.711384
35.0	8.727814
36.0	8.74237
37.0	8.755265
38.0	8.766689
39.0	8.776809
40.0	8.785775
41.0	8.793718
42.0	8.800755
43.0	8.806988
44.0	8.812511
45.0	8.817403
46.0	8.821737
47.0	8.825577
48.0	8.828979
49.0	8.831992
50.0	8.834662
51.0	8.837027
52.0	8.839122
53.0	8.840979
54.0	8.842623
55.0	8.84408
56.0	8.84537
57.0	8.846514
58.0	8.847527
59.0	8.848424
60.0	8.849219
61.0	8.849923
62.0	8.850547
63.0	8.8511
64.0	8.851589
65.0	8.852023
66.0	8.852408
67.0	8.852748
68.0	8.85305
69.0	8.853317
70.0	8.853553
71.0	8.853763
72.0	8.853949
73.0	8.854114
74.0	8.854259
75.0	8.854389
76.0	8.854503
77.0	8.854604
78.0	8.854694
79.0	8.854774
80.0	8.854844
81.0	8.854907
82.0	8.854962
83.0	8.855011
84.0	8.855054
85.0	8.855093
86.0	8.855127
87.0	8.855157
88.0	8.855184
89.0	8.855208
90.0	8.855229
91.0	8.855247
92.0	8.855264
93.0	8.855278
94.0	8.855291
95.0	8.855303
96.0	8.855313
97.0	8.855322
98.0	8.85533
99.0	8.855337
100.0	8.855343