## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[SL24.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=SL24.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=SL24.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Apr 14 01:38:54 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	3302504	0	0	246313	41744	0.074584	24889018

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.011972
2.0	1.898193
3.0	2.67429
4.0	3.353947
5.0	3.949147
6.0	4.470387
7.0	4.926856
8.0	5.326603
9.0	5.676676
10.0	5.983248
11.0	6.251725
12.0	6.486839
13.0	6.692738
14.0	6.873052
15.0	7.030959
16.0	7.169244
17.0	7.290345
18.0	7.396398
19.0	7.489273
20.0	7.570607
21.0	7.641834
22.0	7.70421
23.0	7.758835
24.0	7.806672
25.0	7.848565
26.0	7.885252
27.0	7.91738
28.0	7.945516
29.0	7.970156
30.0	7.991734
31.0	8.01063
32.0	8.027179
33.0	8.041671
34.0	8.054362
35.0	8.065476
36.0	8.075209
37.0	8.083733
38.0	8.091198
39.0	8.097734
40.0	8.103459
41.0	8.108472
42.0	8.112863
43.0	8.116707
44.0	8.120074
45.0	8.123023
46.0	8.125605
47.0	8.127867
48.0	8.129847
49.0	8.131581
50.0	8.1331
51.0	8.13443
52.0	8.135595
53.0	8.136615
54.0	8.137508
55.0	8.13829
56.0	8.138975
57.0	8.139575
58.0	8.140101
59.0	8.140561
60.0	8.140964
61.0	8.141316
62.0	8.141625
63.0	8.141896
64.0	8.142133
65.0	8.142341
66.0	8.142522
67.0	8.142681
68.0	8.142821
69.0	8.142943
70.0	8.14305
71.0	8.143143
72.0	8.143225
73.0	8.143297
74.0	8.14336
75.0	8.143415
76.0	8.143463
77.0	8.143506
78.0	8.143543
79.0	8.143575
80.0	8.143603
81.0	8.143628
82.0	8.14365
83.0	8.143669
84.0	8.143686
85.0	8.1437
86.0	8.143713
87.0	8.143724
88.0	8.143734
89.0	8.143743
90.0	8.14375
91.0	8.143757
92.0	8.143763
93.0	8.143768
94.0	8.143772
95.0	8.143776
96.0	8.143779
97.0	8.143782
98.0	8.143785
99.0	8.143787
100.0	8.143789