## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[SL17.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=SL17.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=SL17.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Apr 14 01:39:01 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	14992054	0	0	541074	154899	0.036091	280060256

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010163
2.0	1.967672
3.0	2.875273
4.0	3.735565
5.0	4.551016
6.0	5.323962
7.0	6.056619
8.0	6.751087
9.0	7.409357
10.0	8.033315
11.0	8.62475
12.0	9.185357
13.0	9.716743
14.0	10.220431
15.0	10.697865
16.0	11.150413
17.0	11.579372
18.0	11.985973
19.0	12.37138
20.0	12.736698
21.0	13.082974
22.0	13.4112
23.0	13.722319
24.0	14.01722
25.0	14.296751
26.0	14.561711
27.0	14.81286
28.0	15.050918
29.0	15.276568
30.0	15.490456
31.0	15.693195
32.0	15.885367
33.0	16.067522
34.0	16.240182
35.0	16.403843
36.0	16.558973
37.0	16.706017
38.0	16.845397
39.0	16.977511
40.0	17.102739
41.0	17.22144
42.0	17.333954
43.0	17.440603
44.0	17.541693
45.0	17.637513
46.0	17.72834
47.0	17.814432
48.0	17.896036
49.0	17.973387
50.0	18.046706
51.0	18.116204
52.0	18.182079
53.0	18.24452
54.0	18.303707
55.0	18.359808
56.0	18.412986
57.0	18.463391
58.0	18.511169
59.0	18.556457
60.0	18.599385
61.0	18.640074
62.0	18.678643
63.0	18.715201
64.0	18.749854
65.0	18.782701
66.0	18.813836
67.0	18.843347
68.0	18.871321
69.0	18.897836
70.0	18.922969
71.0	18.946792
72.0	18.969374
73.0	18.990778
74.0	19.011067
75.0	19.030298
76.0	19.048527
77.0	19.065806
78.0	19.082184
79.0	19.097708
80.0	19.112423
81.0	19.126371
82.0	19.139592
83.0	19.152124
84.0	19.164003
85.0	19.175262
86.0	19.185935
87.0	19.196052
88.0	19.205641
89.0	19.21473
90.0	19.223345
91.0	19.231512
92.0	19.239253
93.0	19.24659
94.0	19.253545
95.0	19.260137
96.0	19.266386
97.0	19.272309
98.0	19.277923
99.0	19.283244
100.0	19.288289