## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[PAXBP1-2.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=PAXBP1-2.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=PAXBP1-2.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Mar 02 03:13:49 PST 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	5800005	0	0	157781	67662	0.027204	180397312

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.011615
2.0	1.991222
3.0	2.939835
4.0	3.858434
5.0	4.747968
6.0	5.609357
7.0	6.443493
8.0	7.251236
9.0	8.033422
10.0	8.79086
11.0	9.524333
12.0	10.234598
13.0	10.922391
14.0	11.588422
15.0	12.23338
16.0	12.857932
17.0	13.462723
18.0	14.048378
19.0	14.615503
20.0	15.164685
21.0	15.69649
22.0	16.211469
23.0	16.710154
24.0	17.193061
25.0	17.660689
26.0	18.113521
27.0	18.552025
28.0	18.976655
29.0	19.38785
30.0	19.786035
31.0	20.171621
32.0	20.545007
33.0	20.90658
34.0	21.256712
35.0	21.595766
36.0	21.924092
37.0	22.24203
38.0	22.549909
39.0	22.848046
40.0	23.136751
41.0	23.416321
42.0	23.687045
43.0	23.949203
44.0	24.203067
45.0	24.448899
46.0	24.686952
47.0	24.917474
48.0	25.140702
49.0	25.356866
50.0	25.566192
51.0	25.768894
52.0	25.965183
53.0	26.155262
54.0	26.339326
55.0	26.517566
56.0	26.690167
57.0	26.857307
58.0	27.019159
59.0	27.17589
60.0	27.327661
61.0	27.474631
62.0	27.616951
63.0	27.754767
64.0	27.888223
65.0	28.017457
66.0	28.142601
67.0	28.263786
68.0	28.381137
69.0	28.494775
70.0	28.604817
71.0	28.711378
72.0	28.814567
73.0	28.914491
74.0	29.011253
75.0	29.104954
76.0	29.195691
77.0	29.283556
78.0	29.368641
79.0	29.451034
80.0	29.530821
81.0	29.608083
82.0	29.6829
83.0	29.75535
84.0	29.825508
85.0	29.893446
86.0	29.959234
87.0	30.022941
88.0	30.084632
89.0	30.144372
90.0	30.202221
91.0	30.25824
92.0	30.312486
93.0	30.365016
94.0	30.415884
95.0	30.465143
96.0	30.512843
97.0	30.559033
98.0	30.603763
99.0	30.647077
100.0	30.68902